Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MIR548B-201ENST00000385247 97 ntBASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 AL359511.1-201ENST00000402970 211 ntBASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 RNA5SP475-201ENST00000410568 110 ntBASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 Y_RNA.629-201ENST00000411368 105 ntBASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 AL356320.1-201ENST00000429616 163 ntBASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 SEPT7P4-201ENST00000437076 306 ntBASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 AL135790.2-201ENST00000437701 267 ntBASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 RN7SL297P-201ENST00000483161 293 ntBASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 AC010409.1-201ENST00000487382 476 ntBASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 SNORA31.15-201ENST00000516771 132 ntBASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 RNU1-104P-201ENST00000517280 175 ntBASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 AC100767.1-201ENST00000528178 123 ntBASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 NDUFA5P6-201ENST00000542110 379 ntBASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 PRELID2P1-201ENST00000552837 301 ntBASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 MIR4648-201ENST00000580107 72 ntBASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 DEFB117-201ENST00000602356 141 ntBASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 RNA5SP205-201ENST00000364653 136 ntBASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 Y_RNA.332-201ENST00000365271 113 ntBASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 RNU1-138P-201ENST00000384093 164 ntBASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 RNU1-148P-201ENST00000384472 162 ntBASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 RNU2-54P-201ENST00000410299 190 ntBASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 RN7SKP223-201ENST00000410582 62 ntBASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 SRIP3-201ENST00000413200 219 ntBASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 AC234781.5-201ENST00000508429 271 ntBASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 AC093259.1-201ENST00000509755 300 ntBASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 RNU6-991P-201ENST00000516168 107 ntBASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 CYCSP26-201ENST00000534107 320 ntBASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 AL049779.4-201ENST00000604500 156 ntBASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 AC004467.1-201ENST00000615678 330 ntBASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 Y_RNA.778-201ENST00000620203 90 ntBASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 AC009487.4-201ENST00000624969 3585 ntBASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CCDC187A0A096LP49 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 RNU1-91P-201ENST00000364746 163 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 RNU6-975P-201ENST00000384296 105 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 RNU6-381P-201ENST00000391259 108 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 RNU2-2P-201ENST00000410396 191 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 AC123900.1-201ENST00000420390 96 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 BTF3P11-201ENST00000426582 477 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 RNU7-57P-201ENST00000459540 60 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 RNA5SP272-201ENST00000516095 111 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 RNU6-948P-201ENST00000516374 107 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 RNU2-34P-201ENST00000516534 121 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 RNU2-12P-201ENST00000517216 168 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 RNU2-4P-201ENST00000606190 192 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 AC025754.2-201ENST00000606491 432 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 SNORD14A-201ENST00000606526 91 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 U2.15-201ENST00000611544 191 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 U2.16-201ENST00000613119 191 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 U2.12-201ENST00000613778 191 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 U2.9-201ENST00000615427 191 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 U2.11-201ENST00000616345 191 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 U2.2-201ENST00000616535 191 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 U2.3-201ENST00000617785 191 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 U2.19-201ENST00000618602 191 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 RNU2-1-201ENST00000618664 191 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 U2.6-201ENST00000619225 191 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 U2.5-201ENST00000619465 191 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 U2.10-201ENST00000620268 191 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 AC100821.1-201ENST00000523153 2479 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.37□□□□□ -2.03
CCDC187A0A096LP49 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC187A0A096LP49 Y_RNA.218-201ENST00000364218 104 ntBASIC2.36□□□□□ -2.03
CCDC187A0A096LP49 RNU6-454P-201ENST00000364292 107 ntBASIC2.36□□□□□ -2.03
CCDC187A0A096LP49 SNORD114-30-201ENST00000364448 72 ntBASIC2.36□□□□□ -2.03
CCDC187A0A096LP49 RNU6-275P-201ENST00000364910 107 ntBASIC2.36□□□□□ -2.03
CCDC187A0A096LP49 RNU4-17P-201ENST00000365598 141 ntBASIC2.36□□□□□ -2.03
CCDC187A0A096LP49 SNORD20-201ENST00000384550 80 ntBASIC2.36□□□□□ -2.03
CCDC187A0A096LP49 MIR1185-2-201ENST00000408687 86 ntBASIC2.36□□□□□ -2.03
CCDC187A0A096LP49 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC187A0A096LP49 MIR4446-201ENST00000578505 67 ntBASIC2.36□□□□□ -2.03
CCDC187A0A096LP49 MIR4769-201ENST00000584126 77 ntBASIC2.36□□□□□ -2.03
CCDC187A0A096LP49 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC187A0A096LP49 AL078604.3-201ENST00000615580 211 ntBASIC2.36□□□□□ -2.03
CCDC187A0A096LP49 AC091895.1-201ENST00000624494 256 ntBASIC2.36□□□□□ -2.03
CCDC187A0A096LP49 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC187A0A096LP49 Y_RNA.182-201ENST00000363880 111 ntBASIC2.35□□□□□ -2.03
CCDC187A0A096LP49 RNU6-801P-201ENST00000364087 105 ntBASIC2.35□□□□□ -2.03
CCDC187A0A096LP49 snoU2_19.4-201ENST00000364329 80 ntBASIC2.35□□□□□ -2.03
CCDC187A0A096LP49 Y_RNA.261-201ENST00000364631 102 ntBASIC2.35□□□□□ -2.03
CCDC187A0A096LP49 Y_RNA.353-201ENST00000365440 108 ntBASIC2.35□□□□□ -2.03
CCDC187A0A096LP49 RNU6-417P-201ENST00000384712 107 ntBASIC2.35□□□□□ -2.03
CCDC187A0A096LP49 RNU6-763P-201ENST00000390865 106 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms