Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 RPL17P19-201ENST00000489069 552 ntBASIC1.22□□□□□ -2.21
USP16Q9Y5T5 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.22□□□□□ -2.21
USP16Q9Y5T5 AC010598.1-201ENST00000510378 103 ntBASIC1.22□□□□□ -2.21
USP16Q9Y5T5 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.22□□□□□ -2.21
USP16Q9Y5T5 MIR4438-201ENST00000585271 93 ntBASIC1.22□□□□□ -2.21
USP16Q9Y5T5 AC211469.2-201ENST00000605461 205 ntBASIC1.22□□□□□ -2.21
USP16Q9Y5T5 MIR6515-201ENST00000619843 57 ntBASIC1.22□□□□□ -2.21
USP16Q9Y5T5 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.22□□□□□ -2.21
USP16Q9Y5T5 AL121890.5-201ENST00000620848 304 ntBASIC1.22□□□□□ -2.21
USP16Q9Y5T5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.22□□□□□ -2.21
USP16Q9Y5T5 SNORA4.2-201ENST00000365313 147 ntBASIC1.21□□□□□ -2.22
USP16Q9Y5T5 Y_RNA.473-201ENST00000384333 102 ntBASIC1.21□□□□□ -2.22
USP16Q9Y5T5 MT-TL1-201ENST00000386347 75 ntBASIC1.21□□□□□ -2.22
USP16Q9Y5T5 RPS29P28-201ENST00000446439 141 ntBASIC1.21□□□□□ -2.22
USP16Q9Y5T5 RPS4XP11-201ENST00000446897 772 ntBASIC1.21□□□□□ -2.22
USP16Q9Y5T5 RPS27P22-201ENST00000478056 241 ntBASIC1.21□□□□□ -2.22
USP16Q9Y5T5 RN7SKP49-201ENST00000516675 260 ntBASIC1.21□□□□□ -2.22
USP16Q9Y5T5 RNU6-264P-201ENST00000517134 104 ntBASIC1.21□□□□□ -2.22
USP16Q9Y5T5 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.21□□□□□ -2.22
USP16Q9Y5T5 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.21□□□□□ -2.22
USP16Q9Y5T5 AC015688.6-201ENST00000577737 104 ntBASIC1.21□□□□□ -2.22
USP16Q9Y5T5 MIR4698-201ENST00000577795 80 ntBASIC1.21□□□□□ -2.22
USP16Q9Y5T5 AC125232.2-201ENST00000592457 143 ntBASIC1.21□□□□□ -2.22
USP16Q9Y5T5 AL162424.1-201ENST00000602325 221 ntBASIC1.21□□□□□ -2.22
USP16Q9Y5T5 AC025253.1-201ENST00000613623 543 ntBASIC1.21□□□□□ -2.22
USP16Q9Y5T5 AC133104.2-201ENST00000615272 193 ntBASIC1.21□□□□□ -2.22
USP16Q9Y5T5 AL669831.3-213ENST00000636676 183 ntBASIC1.21□□□□□ -2.22
USP16Q9Y5T5 TPTEP1-208ENST00000636884 213 ntBASIC1.21□□□□□ -2.22
USP16Q9Y5T5 MIR329-1-201ENST00000385028 80 ntBASIC1.2□□□□□ -2.22
USP16Q9Y5T5 MIR613-201ENST00000385248 95 ntBASIC1.2□□□□□ -2.22
USP16Q9Y5T5 RNA5SP109-201ENST00000391010 116 ntBASIC1.2□□□□□ -2.22
USP16Q9Y5T5 MRPL42P3-201ENST00000401492 326 ntBASIC1.2□□□□□ -2.22
USP16Q9Y5T5 Y_RNA.599-201ENST00000410489 109 ntBASIC1.2□□□□□ -2.22
USP16Q9Y5T5 MTCO3P19-201ENST00000415864 321 ntBASIC1.2□□□□□ -2.22
USP16Q9Y5T5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.2□□□□□ -2.22
USP16Q9Y5T5 AC245047.3-201ENST00000429428 127 ntBASIC1.2□□□□□ -2.22
USP16Q9Y5T5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.2□□□□□ -2.22
USP16Q9Y5T5 AC027119.1-201ENST00000440877 241 ntBASIC1.2□□□□□ -2.22
USP16Q9Y5T5 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.2□□□□□ -2.22
USP16Q9Y5T5 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.2□□□□□ -2.22
USP16Q9Y5T5 PRDX4P1-201ENST00000507189 574 ntBASIC1.2□□□□□ -2.22
USP16Q9Y5T5 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.2□□□□□ -2.22
USP16Q9Y5T5 SCARNA16.2-201ENST00000516520 172 ntBASIC1.2□□□□□ -2.22
USP16Q9Y5T5 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.2□□□□□ -2.22
USP16Q9Y5T5 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.2□□□□□ -2.22
USP16Q9Y5T5 MIR5690-201ENST00000583739 73 ntBASIC1.2□□□□□ -2.22
USP16Q9Y5T5 AC040896.1-201ENST00000613819 479 ntBASIC1.2□□□□□ -2.22
USP16Q9Y5T5 AC022306.2-201ENST00000617563 647 ntBASIC1.2□□□□□ -2.22
USP16Q9Y5T5 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.2□□□□□ -2.22
USP16Q9Y5T5 AC073544.1-201ENST00000600110 1595 ntBASIC1.2□□□□□ -2.22
USP16Q9Y5T5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.2□□□□□ -2.22
USP16Q9Y5T5 SNORA70.7-201ENST00000384159 133 ntBASIC1.19□□□□□ -2.22
USP16Q9Y5T5 RNU6-1145P-201ENST00000384246 107 ntBASIC1.19□□□□□ -2.22
USP16Q9Y5T5 Y_RNA.557-201ENST00000384680 107 ntBASIC1.19□□□□□ -2.22
USP16Q9Y5T5 MIR194-1-201ENST00000384892 85 ntBASIC1.19□□□□□ -2.22
USP16Q9Y5T5 MIR625-201ENST00000385047 85 ntBASIC1.19□□□□□ -2.22
USP16Q9Y5T5 AL034345.1-201ENST00000407768 123 ntBASIC1.19□□□□□ -2.22
USP16Q9Y5T5 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.19□□□□□ -2.22
USP16Q9Y5T5 SNX2P2-201ENST00000424553 323 ntBASIC1.19□□□□□ -2.22
USP16Q9Y5T5 PGBD4P5-201ENST00000445958 426 ntBASIC1.19□□□□□ -2.22
USP16Q9Y5T5 PCNPP5-201ENST00000452246 481 ntBASIC1.19□□□□□ -2.22
USP16Q9Y5T5 SNORD65B-201ENST00000459126 73 ntBASIC1.19□□□□□ -2.22
USP16Q9Y5T5 AC022868.1-201ENST00000517767 391 ntBASIC1.19□□□□□ -2.22
USP16Q9Y5T5 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.19□□□□□ -2.22
USP16Q9Y5T5 RPL21P9-201ENST00000556149 474 ntBASIC1.19□□□□□ -2.22
USP16Q9Y5T5 U6.108-201ENST00000637764 58 ntBASIC1.19□□□□□ -2.22
USP16Q9Y5T5 AC018630.2-201ENST00000534866 2403 ntBASIC1.18□□□□□ -2.22
USP16Q9Y5T5 MIR410-201ENST00000362222 80 ntBASIC1.18□□□□□ -2.22
USP16Q9Y5T5 Y_RNA.358-201ENST00000365491 99 ntBASIC1.18□□□□□ -2.22
USP16Q9Y5T5 Y_RNA.404-201ENST00000383978 102 ntBASIC1.18□□□□□ -2.22
USP16Q9Y5T5 Y_RNA.498-201ENST00000384460 102 ntBASIC1.18□□□□□ -2.22
USP16Q9Y5T5 RNU6-1031P-201ENST00000384773 107 ntBASIC1.18□□□□□ -2.22
USP16Q9Y5T5 Y_RNA.577-201ENST00000384794 101 ntBASIC1.18□□□□□ -2.22
USP16Q9Y5T5 AC114482.1-201ENST00000418010 247 ntBASIC1.18□□□□□ -2.22
USP16Q9Y5T5 AC098614.3-201ENST00000438957 440 ntBASIC1.18□□□□□ -2.22
USP16Q9Y5T5 MIR2053-201ENST00000459295 91 ntBASIC1.18□□□□□ -2.22
USP16Q9Y5T5 RNU7-4P-201ENST00000516961 62 ntBASIC1.18□□□□□ -2.22
USP16Q9Y5T5 AC018448.1-201ENST00000552843 316 ntBASIC1.18□□□□□ -2.22
USP16Q9Y5T5 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.18□□□□□ -2.22
USP16Q9Y5T5 MIR5000-201ENST00000577717 103 ntBASIC1.18□□□□□ -2.22
USP16Q9Y5T5 SNORA28-201ENST00000606769 126 ntBASIC1.18□□□□□ -2.22
USP16Q9Y5T5 MIR6857-201ENST00000613267 93 ntBASIC1.18□□□□□ -2.22
USP16Q9Y5T5 AL078604.3-201ENST00000615580 211 ntBASIC1.18□□□□□ -2.22
USP16Q9Y5T5 PVT1_3.1-201ENST00000620853 95 ntBASIC1.18□□□□□ -2.22
USP16Q9Y5T5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
USP16Q9Y5T5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
USP16Q9Y5T5 RNU6-1310P-201ENST00000384153 107 ntBASIC1.17□□□□□ -2.22
USP16Q9Y5T5 RNU6-370P-201ENST00000411008 104 ntBASIC1.17□□□□□ -2.22
USP16Q9Y5T5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.17□□□□□ -2.22
USP16Q9Y5T5 RNU6-625P-201ENST00000459412 107 ntBASIC1.17□□□□□ -2.22
USP16Q9Y5T5 AC010469.2-201ENST00000496412 480 ntBASIC1.17□□□□□ -2.22
USP16Q9Y5T5 AC097462.1-201ENST00000514125 324 ntBASIC1.17□□□□□ -2.22
USP16Q9Y5T5 RNU7-128P-201ENST00000517247 62 ntBASIC1.17□□□□□ -2.22
USP16Q9Y5T5 RAB11AP2-201ENST00000545905 639 ntBASIC1.17□□□□□ -2.22
USP16Q9Y5T5 CYP3A137P-201ENST00000562436 69 ntBASIC1.17□□□□□ -2.22
USP16Q9Y5T5 FRG2DP-202ENST00000566967 323 ntBASIC1.17□□□□□ -2.22
USP16Q9Y5T5 AL929325.1-201ENST00000603096 117 ntBASIC1.17□□□□□ -2.22
USP16Q9Y5T5 AC022217.4-201ENST00000604389 163 ntBASIC1.17□□□□□ -2.22
USP16Q9Y5T5 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.17□□□□□ -2.22
USP16Q9Y5T5 MIR8054-201ENST00000620877 86 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms