Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 RNU6-407P-201ENST00000365280 104 ntBASIC2.93□□□□□ -1.94
PCDHA2Q9Y5H9 RNU6-1323P-201ENST00000384025 107 ntBASIC2.93□□□□□ -1.94
PCDHA2Q9Y5H9 Y_RNA.572-201ENST00000384757 98 ntBASIC2.93□□□□□ -1.94
PCDHA2Q9Y5H9 CR769767.1-201ENST00000436337 346 ntBASIC2.93□□□□□ -1.94
PCDHA2Q9Y5H9 AL357134.1-201ENST00000445848 426 ntBASIC2.93□□□□□ -1.94
PCDHA2Q9Y5H9 EEF1B2P7-201ENST00000451177 676 ntBASIC2.93□□□□□ -1.94
PCDHA2Q9Y5H9 Y_RNA.797-201ENST00000515977 94 ntBASIC2.93□□□□□ -1.94
PCDHA2Q9Y5H9 RNU7-115P-201ENST00000516433 55 ntBASIC2.93□□□□□ -1.94
PCDHA2Q9Y5H9 AP003357.1-201ENST00000604497 148 ntBASIC2.93□□□□□ -1.94
PCDHA2Q9Y5H9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDHA2Q9Y5H9 AC004832.5-201ENST00000608677 401 ntBASIC2.93□□□□□ -1.94
PCDHA2Q9Y5H9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDHA2Q9Y5H9 MIR548AY-201ENST00000617669 107 ntBASIC2.93□□□□□ -1.94
PCDHA2Q9Y5H9 U2.22-201ENST00000636441 106 ntBASIC2.93□□□□□ -1.94
PCDHA2Q9Y5H9 AC068647.2-201ENST00000637380 353 ntBASIC2.93□□□□□ -1.94
PCDHA2Q9Y5H9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
PCDHA2Q9Y5H9 AL356292.1-201ENST00000283110 373 ntBASIC2.92□□□□□ -1.94
PCDHA2Q9Y5H9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
PCDHA2Q9Y5H9 RNU6-743P-201ENST00000364151 106 ntBASIC2.92□□□□□ -1.94
PCDHA2Q9Y5H9 RNU6-969P-201ENST00000383900 105 ntBASIC2.92□□□□□ -1.94
PCDHA2Q9Y5H9 MIR518C-201ENST00000384822 101 ntBASIC2.92□□□□□ -1.94
PCDHA2Q9Y5H9 AC123900.1-201ENST00000420390 96 ntBASIC2.92□□□□□ -1.94
PCDHA2Q9Y5H9 AC003685.2-201ENST00000422795 395 ntBASIC2.92□□□□□ -1.94
PCDHA2Q9Y5H9 AC117454.1-201ENST00000491120 168 ntBASIC2.92□□□□□ -1.94
PCDHA2Q9Y5H9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDHA2Q9Y5H9 SCARNA8-201ENST00000515924 131 ntBASIC2.92□□□□□ -1.94
PCDHA2Q9Y5H9 RNU6-346P-201ENST00000516288 111 ntBASIC2.92□□□□□ -1.94
PCDHA2Q9Y5H9 AC027419.1-201ENST00000522976 328 ntBASIC2.92□□□□□ -1.94
PCDHA2Q9Y5H9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.92□□□□□ -1.94
PCDHA2Q9Y5H9 MIR4635-201ENST00000583759 79 ntBASIC2.92□□□□□ -1.94
PCDHA2Q9Y5H9 MIR3616-201ENST00000584070 92 ntBASIC2.92□□□□□ -1.94
PCDHA2Q9Y5H9 AL355297.2-201ENST00000604792 129 ntBASIC2.92□□□□□ -1.94
PCDHA2Q9Y5H9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.92□□□□□ -1.94
PCDHA2Q9Y5H9 RNU4-84P-201ENST00000364200 139 ntBASIC2.91□□□□□ -1.94
PCDHA2Q9Y5H9 SNORA67.4-201ENST00000384688 142 ntBASIC2.91□□□□□ -1.94
PCDHA2Q9Y5H9 MIR561-201ENST00000385216 97 ntBASIC2.91□□□□□ -1.94
PCDHA2Q9Y5H9 MIR616-201ENST00000385293 97 ntBASIC2.91□□□□□ -1.94
PCDHA2Q9Y5H9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
PCDHA2Q9Y5H9 RNU6-578P-201ENST00000390980 103 ntBASIC2.91□□□□□ -1.94
PCDHA2Q9Y5H9 EBAG9P1-201ENST00000418955 543 ntBASIC2.91□□□□□ -1.94
PCDHA2Q9Y5H9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDHA2Q9Y5H9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDHA2Q9Y5H9 SEPT7P4-201ENST00000437076 306 ntBASIC2.91□□□□□ -1.94
PCDHA2Q9Y5H9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDHA2Q9Y5H9 MIR4724-201ENST00000579485 89 ntBASIC2.91□□□□□ -1.94
PCDHA2Q9Y5H9 AC005972.2-201ENST00000604690 348 ntBASIC2.91□□□□□ -1.94
PCDHA2Q9Y5H9 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.91□□□□□ -1.94
PCDHA2Q9Y5H9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
PCDHA2Q9Y5H9 FAM35CP-201ENST00000554755 2470 ntBASIC2.91□□□□□ -1.94
PCDHA2Q9Y5H9 RNU6-117P-201ENST00000365415 107 ntBASIC2.9□□□□□ -1.95
PCDHA2Q9Y5H9 RNU6-1130P-201ENST00000365434 107 ntBASIC2.9□□□□□ -1.95
PCDHA2Q9Y5H9 SNORD50.2-201ENST00000365465 70 ntBASIC2.9□□□□□ -1.95
PCDHA2Q9Y5H9 Y_RNA.357-201ENST00000365487 109 ntBASIC2.9□□□□□ -1.95
PCDHA2Q9Y5H9 MIR613-201ENST00000385248 95 ntBASIC2.9□□□□□ -1.95
PCDHA2Q9Y5H9 SNORA36B-201ENST00000410438 131 ntBASIC2.9□□□□□ -1.95
PCDHA2Q9Y5H9 TMSB4XP3-201ENST00000445144 114 ntBASIC2.9□□□□□ -1.95
PCDHA2Q9Y5H9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.9□□□□□ -1.95
PCDHA2Q9Y5H9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.9□□□□□ -1.95
PCDHA2Q9Y5H9 RNU6-453P-201ENST00000516819 85 ntBASIC2.9□□□□□ -1.95
PCDHA2Q9Y5H9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.9□□□□□ -1.95
PCDHA2Q9Y5H9 MIR3945-201ENST00000581853 98 ntBASIC2.9□□□□□ -1.95
PCDHA2Q9Y5H9 MIR4435-1-201ENST00000582552 80 ntBASIC2.9□□□□□ -1.95
PCDHA2Q9Y5H9 AL391903.3-201ENST00000612158 163 ntBASIC2.9□□□□□ -1.95
PCDHA2Q9Y5H9 MTND1P7-201ENST00000632801 297 ntBASIC2.9□□□□□ -1.95
PCDHA2Q9Y5H9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PCDHA2Q9Y5H9 CENPCP1-201ENST00000533085 2578 ntBASIC2.9□□□□□ -1.95
PCDHA2Q9Y5H9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PCDHA2Q9Y5H9 MIR340-201ENST00000362125 95 ntBASIC2.89□□□□□ -1.95
PCDHA2Q9Y5H9 SNORA19-201ENST00000384737 128 ntBASIC2.89□□□□□ -1.95
PCDHA2Q9Y5H9 AL135786.1-201ENST00000415892 214 ntBASIC2.89□□□□□ -1.95
PCDHA2Q9Y5H9 AC010154.1-201ENST00000425857 269 ntBASIC2.89□□□□□ -1.95
PCDHA2Q9Y5H9 AC018868.1-201ENST00000491307 315 ntBASIC2.89□□□□□ -1.95
PCDHA2Q9Y5H9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDHA2Q9Y5H9 RNU6-991P-201ENST00000516168 107 ntBASIC2.89□□□□□ -1.95
PCDHA2Q9Y5H9 RNU7-116P-201ENST00000516940 62 ntBASIC2.89□□□□□ -1.95
PCDHA2Q9Y5H9 AC127455.1-201ENST00000565496 145 ntBASIC2.89□□□□□ -1.95
PCDHA2Q9Y5H9 POLR3GP1-201ENST00000594073 261 ntBASIC2.89□□□□□ -1.95
PCDHA2Q9Y5H9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDHA2Q9Y5H9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDHA2Q9Y5H9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
PCDHA2Q9Y5H9 MIR367-201ENST00000362299 68 ntBASIC2.88□□□□□ -1.95
PCDHA2Q9Y5H9 RNU6-704P-201ENST00000364162 103 ntBASIC2.88□□□□□ -1.95
PCDHA2Q9Y5H9 RNU6-449P-201ENST00000383914 107 ntBASIC2.88□□□□□ -1.95
PCDHA2Q9Y5H9 SNORD116-18-201ENST00000383961 92 ntBASIC2.88□□□□□ -1.95
PCDHA2Q9Y5H9 AC010409.1-201ENST00000487382 476 ntBASIC2.88□□□□□ -1.95
PCDHA2Q9Y5H9 RNU6-63P-201ENST00000516690 95 ntBASIC2.88□□□□□ -1.95
PCDHA2Q9Y5H9 RN7SKP282-201ENST00000516824 299 ntBASIC2.88□□□□□ -1.95
PCDHA2Q9Y5H9 RNU6-856P-201ENST00000516959 98 ntBASIC2.88□□□□□ -1.95
PCDHA2Q9Y5H9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDHA2Q9Y5H9 MIR4431-201ENST00000579990 94 ntBASIC2.88□□□□□ -1.95
PCDHA2Q9Y5H9 MIR3117-201ENST00000584034 78 ntBASIC2.88□□□□□ -1.95
PCDHA2Q9Y5H9 AC132825.6-201ENST00000638861 357 ntBASIC2.88□□□□□ -1.95
PCDHA2Q9Y5H9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
PCDHA2Q9Y5H9 AC138915.1-201ENST00000565427 1685 ntBASIC2.88□□□□□ -1.95
PCDHA2Q9Y5H9 Y_RNA.229-201ENST00000364347 113 ntBASIC2.87□□□□□ -1.95
PCDHA2Q9Y5H9 RNA5SP511-201ENST00000410487 115 ntBASIC2.87□□□□□ -1.95
PCDHA2Q9Y5H9 AL513477.1-202ENST00000417061 214 ntBASIC2.87□□□□□ -1.95
PCDHA2Q9Y5H9 AC104332.2-201ENST00000429959 156 ntBASIC2.87□□□□□ -1.95
PCDHA2Q9Y5H9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDHA2Q9Y5H9 AC245047.8-201ENST00000456455 284 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms