Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHGA11Q9Y5H2 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHGA11Q9Y5H2 Z83843.1-201ENST00000604070 3685 ntBASIC3.45□□□□□ -1.86
PCDHGA11Q9Y5H2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHGA11Q9Y5H2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHGA11Q9Y5H2 U8.11-201ENST00000384699 133 ntBASIC3.44□□□□□ -1.86
PCDHGA11Q9Y5H2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PCDHGA11Q9Y5H2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PCDHGA11Q9Y5H2 SNORD77.3-201ENST00000391113 65 ntBASIC3.44□□□□□ -1.86
PCDHGA11Q9Y5H2 SNORA57.1-201ENST00000391227 145 ntBASIC3.44□□□□□ -1.86
PCDHGA11Q9Y5H2 RNA5SP89-201ENST00000410300 108 ntBASIC3.44□□□□□ -1.86
PCDHGA11Q9Y5H2 U8.18-201ENST00000459285 133 ntBASIC3.44□□□□□ -1.86
PCDHGA11Q9Y5H2 AC010401.1-201ENST00000463867 348 ntBASIC3.44□□□□□ -1.86
PCDHGA11Q9Y5H2 AC110768.1-201ENST00000509222 400 ntBASIC3.44□□□□□ -1.86
PCDHGA11Q9Y5H2 AC007536.1-201ENST00000533382 349 ntBASIC3.44□□□□□ -1.86
PCDHGA11Q9Y5H2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.44□□□□□ -1.86
PCDHGA11Q9Y5H2 AL449363.1-201ENST00000617815 186 ntBASIC3.44□□□□□ -1.86
PCDHGA11Q9Y5H2 U6.108-201ENST00000637764 58 ntBASIC3.44□□□□□ -1.86
PCDHGA11Q9Y5H2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHGA11Q9Y5H2 AC068647.1-201ENST00000489539 2265 ntBASIC3.44□□□□□ -1.86
PCDHGA11Q9Y5H2 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGA11Q9Y5H2 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGA11Q9Y5H2 MIR30E-201ENST00000362104 92 ntBASIC3.43□□□□□ -1.86
PCDHGA11Q9Y5H2 MIR522-201ENST00000385071 87 ntBASIC3.43□□□□□ -1.86
PCDHGA11Q9Y5H2 ATP5A1P2-201ENST00000412323 255 ntBASIC3.43□□□□□ -1.86
PCDHGA11Q9Y5H2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.43□□□□□ -1.86
PCDHGA11Q9Y5H2 SNORD105B-201ENST00000458770 79 ntBASIC3.43□□□□□ -1.86
PCDHGA11Q9Y5H2 RPS27P29-201ENST00000463110 252 ntBASIC3.43□□□□□ -1.86
PCDHGA11Q9Y5H2 RN7SL594P-201ENST00000470590 287 ntBASIC3.43□□□□□ -1.86
PCDHGA11Q9Y5H2 Y_RNA.694-201ENST00000516677 117 ntBASIC3.43□□□□□ -1.86
PCDHGA11Q9Y5H2 AC091544.4-201ENST00000555268 342 ntBASIC3.43□□□□□ -1.86
PCDHGA11Q9Y5H2 AC006130.2-201ENST00000586202 326 ntBASIC3.43□□□□□ -1.86
PCDHGA11Q9Y5H2 AL137067.1-201ENST00000615933 120 ntBASIC3.43□□□□□ -1.86
PCDHGA11Q9Y5H2 AC134878.1-201ENST00000619901 243 ntBASIC3.43□□□□□ -1.86
PCDHGA11Q9Y5H2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.43□□□□□ -1.86
PCDHGA11Q9Y5H2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGA11Q9Y5H2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PCDHGA11Q9Y5H2 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGA11Q9Y5H2 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGA11Q9Y5H2 SNORA1B-201ENST00000362535 133 ntBASIC3.42□□□□□ -1.86
PCDHGA11Q9Y5H2 RNA5SP51-201ENST00000364750 119 ntBASIC3.42□□□□□ -1.86
PCDHGA11Q9Y5H2 RNU6-32P-201ENST00000383948 107 ntBASIC3.42□□□□□ -1.86
PCDHGA11Q9Y5H2 Y_RNA.410-201ENST00000383992 113 ntBASIC3.42□□□□□ -1.86
PCDHGA11Q9Y5H2 RNU6-13P-201ENST00000384248 107 ntBASIC3.42□□□□□ -1.86
PCDHGA11Q9Y5H2 RNU6-12P-201ENST00000384604 107 ntBASIC3.42□□□□□ -1.86
PCDHGA11Q9Y5H2 RNU6-41P-201ENST00000384741 107 ntBASIC3.42□□□□□ -1.86
PCDHGA11Q9Y5H2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHGA11Q9Y5H2 CST2P1-201ENST00000425770 87 ntBASIC3.42□□□□□ -1.86
PCDHGA11Q9Y5H2 IGKV1-22-201ENST00000524313 326 ntBASIC3.42□□□□□ -1.86
PCDHGA11Q9Y5H2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHGA11Q9Y5H2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 RNU6-1084P-201ENST00000362498 107 ntBASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 SNORD9-201ENST00000362566 104 ntBASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 SNORD14E-201ENST00000364009 85 ntBASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 RNA5SP125-201ENST00000364843 120 ntBASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 RNU6-442P-201ENST00000383968 104 ntBASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 SNORA26.7-201ENST00000391288 122 ntBASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 MIR1193-201ENST00000408109 78 ntBASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 AL035423.1-201ENST00000420331 213 ntBASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 AC009238.1-201ENST00000442165 424 ntBASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 AC009237.6-201ENST00000446969 424 ntBASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 AC026333.2-201ENST00000542164 106 ntBASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 AC006254.2-201ENST00000603259 279 ntBASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 AC022149.2-201ENST00000621061 203 ntBASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 AC245060.5-201ENST00000610778 3293 ntBASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 MFSD8-233ENST00000641482 4860 ntBASIC3.41□□□□□ -1.86
PCDHGA11Q9Y5H2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
PCDHGA11Q9Y5H2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHGA11Q9Y5H2 SNORD68-201ENST00000363214 84 ntBASIC3.4□□□□□ -1.87
PCDHGA11Q9Y5H2 Y_RNA.116-201ENST00000363292 103 ntBASIC3.4□□□□□ -1.87
PCDHGA11Q9Y5H2 SNORD114-6-201ENST00000364393 72 ntBASIC3.4□□□□□ -1.87
PCDHGA11Q9Y5H2 MIR570-201ENST00000384917 97 ntBASIC3.4□□□□□ -1.87
PCDHGA11Q9Y5H2 COX6CP6-201ENST00000490840 228 ntBASIC3.4□□□□□ -1.87
PCDHGA11Q9Y5H2 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHGA11Q9Y5H2 RN7SKP18-201ENST00000516005 275 ntBASIC3.4□□□□□ -1.87
PCDHGA11Q9Y5H2 MIR5197-201ENST00000583721 112 ntBASIC3.4□□□□□ -1.87
PCDHGA11Q9Y5H2 SNORA51-201ENST00000606420 132 ntBASIC3.4□□□□□ -1.87
PCDHGA11Q9Y5H2 MIR7851-201ENST00000610611 160 ntBASIC3.4□□□□□ -1.87
PCDHGA11Q9Y5H2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHGA11Q9Y5H2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDHGA11Q9Y5H2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDHGA11Q9Y5H2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PCDHGA11Q9Y5H2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PCDHGA11Q9Y5H2 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.39□□□□□ -1.87
PCDHGA11Q9Y5H2 Y_RNA.281-201ENST00000364774 94 ntBASIC3.39□□□□□ -1.87
PCDHGA11Q9Y5H2 Y_RNA.495-201ENST00000384435 112 ntBASIC3.39□□□□□ -1.87
PCDHGA11Q9Y5H2 RNU6-1072P-201ENST00000384703 107 ntBASIC3.39□□□□□ -1.87
PCDHGA11Q9Y5H2 RNU6-443P-201ENST00000384780 107 ntBASIC3.39□□□□□ -1.87
PCDHGA11Q9Y5H2 MIR548A2-201ENST00000384956 97 ntBASIC3.39□□□□□ -1.87
PCDHGA11Q9Y5H2 MIR518F-201ENST00000384973 87 ntBASIC3.39□□□□□ -1.87
PCDHGA11Q9Y5H2 MIR1289-1-201ENST00000408836 144 ntBASIC3.39□□□□□ -1.87
PCDHGA11Q9Y5H2 RNA5SP293-201ENST00000410527 113 ntBASIC3.39□□□□□ -1.87
PCDHGA11Q9Y5H2 AC104332.2-201ENST00000429959 156 ntBASIC3.39□□□□□ -1.87
PCDHGA11Q9Y5H2 GOT2P5-201ENST00000433995 546 ntBASIC3.39□□□□□ -1.87
PCDHGA11Q9Y5H2 RN7SL442P-201ENST00000473804 320 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms