Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 COX6CP10-201ENST00000416832 224 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 MRPS10P1-201ENST00000448483 130 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 RNU7-94P-201ENST00000459576 63 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 Y_RNA.631-201ENST00000459607 101 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 AL163195.1-201ENST00000496941 348 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 RNU7-99P-201ENST00000516271 62 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 CBX3P4-201ENST00000538909 354 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 AL390123.1-201ENST00000603216 237 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 AL121655.1-201ENST00000605811 308 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 AC011476.5-201ENST00000615594 130 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 U6.115-201ENST00000636045 103 ntBASIC1.88□□□□□ -2.11
KDM3AQ9Y4C1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
KDM3AQ9Y4C1 AC005592.1-201ENST00000566527 1640 ntBASIC1.87□□□□□ -2.11
KDM3AQ9Y4C1 Y_RNA.226-201ENST00000364337 114 ntBASIC1.87□□□□□ -2.11
KDM3AQ9Y4C1 Y_RNA.230-201ENST00000364348 109 ntBASIC1.87□□□□□ -2.11
KDM3AQ9Y4C1 RNU6-20P-201ENST00000384106 107 ntBASIC1.87□□□□□ -2.11
KDM3AQ9Y4C1 RNU6-296P-201ENST00000384608 107 ntBASIC1.87□□□□□ -2.11
KDM3AQ9Y4C1 MCFD2P1-201ENST00000417812 300 ntBASIC1.87□□□□□ -2.11
KDM3AQ9Y4C1 MTCO2P12-201ENST00000427426 682 ntBASIC1.87□□□□□ -2.11
KDM3AQ9Y4C1 HSPE1P9-201ENST00000440046 311 ntBASIC1.87□□□□□ -2.11
KDM3AQ9Y4C1 AC093852.1-201ENST00000503587 266 ntBASIC1.87□□□□□ -2.11
KDM3AQ9Y4C1 AC108729.3-201ENST00000513484 108 ntBASIC1.87□□□□□ -2.11
KDM3AQ9Y4C1 SNORA70.12-201ENST00000516084 153 ntBASIC1.87□□□□□ -2.11
KDM3AQ9Y4C1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KDM3AQ9Y4C1 snoU13.31-201ENST00000607291 104 ntBASIC1.87□□□□□ -2.11
KDM3AQ9Y4C1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.87□□□□□ -2.11
KDM3AQ9Y4C1 AC007485.1-201ENST00000616755 206 ntBASIC1.87□□□□□ -2.11
KDM3AQ9Y4C1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KDM3AQ9Y4C1 SNORA33-201ENST00000363664 130 ntBASIC1.86□□□□□ -2.11
KDM3AQ9Y4C1 SNORA63D-201ENST00000364359 132 ntBASIC1.86□□□□□ -2.11
KDM3AQ9Y4C1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
KDM3AQ9Y4C1 RNU6-360P-201ENST00000390944 104 ntBASIC1.86□□□□□ -2.11
KDM3AQ9Y4C1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.86□□□□□ -2.11
KDM3AQ9Y4C1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.86□□□□□ -2.11
KDM3AQ9Y4C1 AC073910.1-201ENST00000445047 438 ntBASIC1.86□□□□□ -2.11
KDM3AQ9Y4C1 RPL26P26-201ENST00000480251 434 ntBASIC1.86□□□□□ -2.11
KDM3AQ9Y4C1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.86□□□□□ -2.11
KDM3AQ9Y4C1 AC025465.3-201ENST00000510570 311 ntBASIC1.86□□□□□ -2.11
KDM3AQ9Y4C1 RNU6-1053P-201ENST00000515930 101 ntBASIC1.86□□□□□ -2.11
KDM3AQ9Y4C1 RNA5SP20-201ENST00000515976 84 ntBASIC1.86□□□□□ -2.11
KDM3AQ9Y4C1 RNU7-172P-201ENST00000517125 64 ntBASIC1.86□□□□□ -2.11
KDM3AQ9Y4C1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.86□□□□□ -2.11
KDM3AQ9Y4C1 AC134503.1-201ENST00000633048 54 ntBASIC1.86□□□□□ -2.11
KDM3AQ9Y4C1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
KDM3AQ9Y4C1 MIR378A-201ENST00000362177 66 ntBASIC1.85□□□□□ -2.11
KDM3AQ9Y4C1 SNORA27.1-201ENST00000362604 124 ntBASIC1.85□□□□□ -2.11
KDM3AQ9Y4C1 MIR873-201ENST00000401120 77 ntBASIC1.85□□□□□ -2.11
KDM3AQ9Y4C1 AL355796.1-201ENST00000406706 323 ntBASIC1.85□□□□□ -2.11
KDM3AQ9Y4C1 MIR1302-11-201ENST00000408051 138 ntBASIC1.85□□□□□ -2.11
KDM3AQ9Y4C1 MIR1302-9-201ENST00000408365 138 ntBASIC1.85□□□□□ -2.11
KDM3AQ9Y4C1 MIR1302-10-201ENST00000408734 138 ntBASIC1.85□□□□□ -2.11
KDM3AQ9Y4C1 RNU4-62P-201ENST00000410125 130 ntBASIC1.85□□□□□ -2.11
KDM3AQ9Y4C1 AL390729.2-201ENST00000416137 156 ntBASIC1.85□□□□□ -2.11
KDM3AQ9Y4C1 BTF3P4-201ENST00000418852 495 ntBASIC1.85□□□□□ -2.11
KDM3AQ9Y4C1 MTND4P19-201ENST00000446659 478 ntBASIC1.85□□□□□ -2.11
KDM3AQ9Y4C1 U8.20-201ENST00000459445 131 ntBASIC1.85□□□□□ -2.11
KDM3AQ9Y4C1 RNU6-1278P-201ENST00000516130 107 ntBASIC1.85□□□□□ -2.11
KDM3AQ9Y4C1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.85□□□□□ -2.11
KDM3AQ9Y4C1 AC040926.1-201ENST00000530195 238 ntBASIC1.85□□□□□ -2.11
KDM3AQ9Y4C1 AP002001.1-203ENST00000534002 267 ntBASIC1.85□□□□□ -2.11
KDM3AQ9Y4C1 MIR1302-2-201ENST00000607096 138 ntBASIC1.85□□□□□ -2.11
KDM3AQ9Y4C1 SNORD58B-201ENST00000607313 66 ntBASIC1.85□□□□□ -2.11
KDM3AQ9Y4C1 AC010205.1-201ENST00000616668 449 ntBASIC1.85□□□□□ -2.11
KDM3AQ9Y4C1 Y_RNA.80-201ENST00000362996 102 ntBASIC1.84□□□□□ -2.12
KDM3AQ9Y4C1 RNU6-454P-201ENST00000364292 107 ntBASIC1.84□□□□□ -2.12
KDM3AQ9Y4C1 Y_RNA.439-201ENST00000384119 94 ntBASIC1.84□□□□□ -2.12
KDM3AQ9Y4C1 Y_RNA.485-201ENST00000384395 102 ntBASIC1.84□□□□□ -2.12
KDM3AQ9Y4C1 RNU6-308P-201ENST00000390957 107 ntBASIC1.84□□□□□ -2.12
KDM3AQ9Y4C1 RNU5A-5P-201ENST00000411054 116 ntBASIC1.84□□□□□ -2.12
KDM3AQ9Y4C1 RN7SKP101-201ENST00000411376 320 ntBASIC1.84□□□□□ -2.12
KDM3AQ9Y4C1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.84□□□□□ -2.12
KDM3AQ9Y4C1 RNA5SP437-201ENST00000517249 129 ntBASIC1.84□□□□□ -2.12
KDM3AQ9Y4C1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.84□□□□□ -2.12
KDM3AQ9Y4C1 MIR4303-201ENST00000581299 66 ntBASIC1.84□□□□□ -2.12
KDM3AQ9Y4C1 MIR8074-201ENST00000615081 81 ntBASIC1.84□□□□□ -2.12
KDM3AQ9Y4C1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 AC091812.1-201ENST00000432235 1948 ntBASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 Y_RNA.28-201ENST00000362554 111 ntBASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 RNU6-324P-201ENST00000363957 106 ntBASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 Y_RNA.243-201ENST00000364481 109 ntBASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 AC117470.1-201ENST00000381974 330 ntBASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 Y_RNA.471-201ENST00000384312 102 ntBASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 RNU6-376P-201ENST00000384731 106 ntBASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 MIR562-201ENST00000384894 95 ntBASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 MIR30A-201ENST00000385092 71 ntBASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 MIR1267-201ENST00000408723 78 ntBASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 RNU2-54P-201ENST00000410299 190 ntBASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 AP1B1P2-201ENST00000416196 106 ntBASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 MTND1P14-201ENST00000427400 950 ntBASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 snoU13.27-201ENST00000459278 104 ntBASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 RPS26P45-201ENST00000471748 340 ntBASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 AC097462.1-201ENST00000514125 324 ntBASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 RNU6-155P-201ENST00000516347 100 ntBASIC1.83□□□□□ -2.12
KDM3AQ9Y4C1 MIR4709-201ENST00000577272 72 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms