Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 HMGN2P31-201ENST00000432430 273 ntBASIC4.78□□□□□ -1.64
TRIM35Q9UPQ4 AC104619.4-201ENST00000510773 249 ntBASIC4.78□□□□□ -1.64
TRIM35Q9UPQ4 RNU7-99P-201ENST00000516271 62 ntBASIC4.78□□□□□ -1.64
TRIM35Q9UPQ4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM35Q9UPQ4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM35Q9UPQ4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TRIM35Q9UPQ4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM35Q9UPQ4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
TRIM35Q9UPQ4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM35Q9UPQ4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM35Q9UPQ4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TRIM35Q9UPQ4 RNU6-1163P-201ENST00000364516 107 ntBASIC4.77□□□□□ -1.65
TRIM35Q9UPQ4 MIR607-201ENST00000385241 96 ntBASIC4.77□□□□□ -1.65
TRIM35Q9UPQ4 RNU6-129P-201ENST00000391022 107 ntBASIC4.77□□□□□ -1.65
TRIM35Q9UPQ4 PTMAP2-201ENST00000397627 327 ntBASIC4.77□□□□□ -1.65
TRIM35Q9UPQ4 RNA5SP239-201ENST00000410218 129 ntBASIC4.77□□□□□ -1.65
TRIM35Q9UPQ4 RNA5SP129-201ENST00000410276 118 ntBASIC4.77□□□□□ -1.65
TRIM35Q9UPQ4 RPL31P63-201ENST00000422565 375 ntBASIC4.77□□□□□ -1.65
TRIM35Q9UPQ4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
TRIM35Q9UPQ4 RNU7-113P-201ENST00000459273 62 ntBASIC4.77□□□□□ -1.65
TRIM35Q9UPQ4 RN7SL93P-201ENST00000463035 293 ntBASIC4.77□□□□□ -1.65
TRIM35Q9UPQ4 MIR4429-201ENST00000580105 73 ntBASIC4.77□□□□□ -1.65
TRIM35Q9UPQ4 MIR486-1-201ENST00000612171 68 ntBASIC4.77□□□□□ -1.65
TRIM35Q9UPQ4 uc_338.14-201ENST00000613162 166 ntBASIC4.77□□□□□ -1.65
TRIM35Q9UPQ4 U2.20-201ENST00000613956 192 ntBASIC4.77□□□□□ -1.65
TRIM35Q9UPQ4 MIR6079-201ENST00000635807 62 ntBASIC4.77□□□□□ -1.65
TRIM35Q9UPQ4 AC009093.8-201ENST00000641769 292 ntBASIC4.77□□□□□ -1.65
TRIM35Q9UPQ4 AL049781.1-201ENST00000623195 3585 ntBASIC4.76□□□□□ -1.65
TRIM35Q9UPQ4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM35Q9UPQ4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM35Q9UPQ4 AC005336.3-201ENST00000623833 2679 ntBASIC4.76□□□□□ -1.65
TRIM35Q9UPQ4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM35Q9UPQ4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM35Q9UPQ4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM35Q9UPQ4 SNORA40.18-201ENST00000391200 128 ntBASIC4.76□□□□□ -1.65
TRIM35Q9UPQ4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.76□□□□□ -1.65
TRIM35Q9UPQ4 AC106707.2-201ENST00000484182 374 ntBASIC4.76□□□□□ -1.65
TRIM35Q9UPQ4 AC078918.1-201ENST00000498515 228 ntBASIC4.76□□□□□ -1.65
TRIM35Q9UPQ4 RNU6-871P-201ENST00000516122 100 ntBASIC4.76□□□□□ -1.65
TRIM35Q9UPQ4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM35Q9UPQ4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM35Q9UPQ4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM35Q9UPQ4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM35Q9UPQ4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
TRIM35Q9UPQ4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM35Q9UPQ4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM35Q9UPQ4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM35Q9UPQ4 Y_RNA.247-201ENST00000364500 92 ntBASIC4.75□□□□□ -1.65
TRIM35Q9UPQ4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.75□□□□□ -1.65
TRIM35Q9UPQ4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.75□□□□□ -1.65
TRIM35Q9UPQ4 AC069257.2-201ENST00000441819 155 ntBASIC4.75□□□□□ -1.65
TRIM35Q9UPQ4 SNORA31.4-201ENST00000516049 129 ntBASIC4.75□□□□□ -1.65
TRIM35Q9UPQ4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
TRIM35Q9UPQ4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
TRIM35Q9UPQ4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM35Q9UPQ4 AC008264.2-201ENST00000610193 3731 ntBASIC4.75□□□□□ -1.65
TRIM35Q9UPQ4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM35Q9UPQ4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 SNORA71.3-201ENST00000362582 128 ntBASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 SNORD115-2-201ENST00000362842 82 ntBASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 RNU1-18P-201ENST00000363062 164 ntBASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 Y_RNA.140-201ENST00000363474 103 ntBASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 RNA5SP42-201ENST00000364278 115 ntBASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 SNORD115-20-201ENST00000365099 82 ntBASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 AC097463.2-201ENST00000421074 142 ntBASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 RNA5SP143-201ENST00000516936 115 ntBASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 SCARNA3-201ENST00000517097 143 ntBASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 RNU7-128P-201ENST00000517247 62 ntBASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 SNORA51-201ENST00000606420 132 ntBASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 AL353149.1-201ENST00000610667 244 ntBASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 AL110115.1-201ENST00000614396 364 ntBASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM35Q9UPQ4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
TRIM35Q9UPQ4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM35Q9UPQ4 Y_RNA.57-201ENST00000362806 113 ntBASIC4.73□□□□□ -1.65
TRIM35Q9UPQ4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TRIM35Q9UPQ4 SNORA48.7-201ENST00000391302 135 ntBASIC4.73□□□□□ -1.65
TRIM35Q9UPQ4 CYCSP4-201ENST00000429682 331 ntBASIC4.73□□□□□ -1.65
TRIM35Q9UPQ4 HMGN2P34-201ENST00000437647 269 ntBASIC4.73□□□□□ -1.65
TRIM35Q9UPQ4 AC107083.1-201ENST00000439643 279 ntBASIC4.73□□□□□ -1.65
TRIM35Q9UPQ4 MIR1270-201ENST00000459320 83 ntBASIC4.73□□□□□ -1.65
TRIM35Q9UPQ4 LINC00901.1-201ENST00000617252 152 ntBASIC4.73□□□□□ -1.65
TRIM35Q9UPQ4 AC093831.2-201ENST00000624393 3427 ntBASIC4.73□□□□□ -1.65
TRIM35Q9UPQ4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TRIM35Q9UPQ4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM35Q9UPQ4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM35Q9UPQ4 RNA5SP322-201ENST00000363617 119 ntBASIC4.72□□□□□ -1.65
TRIM35Q9UPQ4 Y_RNA.171-201ENST00000363760 102 ntBASIC4.72□□□□□ -1.65
TRIM35Q9UPQ4 snoU2-30.1-201ENST00000365012 70 ntBASIC4.72□□□□□ -1.65
TRIM35Q9UPQ4 RNU6-1274P-201ENST00000384557 107 ntBASIC4.72□□□□□ -1.65
TRIM35Q9UPQ4 RNU1-89P-201ENST00000384592 164 ntBASIC4.72□□□□□ -1.65
TRIM35Q9UPQ4 MTND4LP19-201ENST00000403051 166 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 213.5 ms