Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AL356292.1-201ENST00000283110 373 ntBASIC3.87□□□□□ -1.79
COL17A1Q9UMD9 FTH1P15-201ENST00000406984 280 ntBASIC3.87□□□□□ -1.79
COL17A1Q9UMD9 AC009414.1-201ENST00000427200 443 ntBASIC3.87□□□□□ -1.79
COL17A1Q9UMD9 AC007969.2-201ENST00000441891 191 ntBASIC3.87□□□□□ -1.79
COL17A1Q9UMD9 RNU6-58P-201ENST00000517143 103 ntBASIC3.87□□□□□ -1.79
COL17A1Q9UMD9 CYCSP23-201ENST00000519781 313 ntBASIC3.87□□□□□ -1.79
COL17A1Q9UMD9 AC018630.3-201ENST00000542637 96 ntBASIC3.87□□□□□ -1.79
COL17A1Q9UMD9 MIR5571-201ENST00000577998 113 ntBASIC3.87□□□□□ -1.79
COL17A1Q9UMD9 AC120024.3-201ENST00000603167 156 ntBASIC3.87□□□□□ -1.79
COL17A1Q9UMD9 AC103810.6-201ENST00000606708 136 ntBASIC3.87□□□□□ -1.79
COL17A1Q9UMD9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.87□□□□□ -1.79
COL17A1Q9UMD9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.87□□□□□ -1.79
COL17A1Q9UMD9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.87□□□□□ -1.79
COL17A1Q9UMD9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL17A1Q9UMD9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL17A1Q9UMD9 RNU6-508P-201ENST00000363231 103 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 U3.9-201ENST00000363823 204 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 RNY3P5-201ENST00000384127 102 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 MIRLET7F2-201ENST00000385277 83 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 MIR1302-5-201ENST00000408164 150 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 RNU2-54P-201ENST00000410299 190 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 RPL23AP70-201ENST00000483361 460 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 AC091874.1-201ENST00000511402 339 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 RNU6-1053P-201ENST00000515930 101 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 RNU2-58P-201ENST00000516403 183 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 AC136628.3-201ENST00000521868 290 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 CKS1BP7-201ENST00000522230 235 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 AC006199.1-201ENST00000548728 219 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 AC018448.1-201ENST00000552843 316 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 AL031274.2-201ENST00000599419 203 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 AC073308.1-201ENST00000623696 305 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 AC010329.5-201ENST00000623497 2174 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 AC092881.1-201ENST00000638218 2733 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 MIR26A1-201ENST00000362205 77 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 SNORD115-8-201ENST00000363856 82 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 SNORD115-38-201ENST00000365037 82 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 U8.10-201ENST00000384260 133 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 Y_RNA.498-201ENST00000384460 102 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 RNA5SP390-201ENST00000410191 113 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 RNU6-109P-201ENST00000516364 107 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 RNU6-184P-201ENST00000516514 107 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 AC025647.1-201ENST00000517879 253 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 MIR3690-201ENST00000580266 75 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 AC090115.4-201ENST00000609970 188 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.86□□□□□ -1.79
COL17A1Q9UMD9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
COL17A1Q9UMD9 Y_RNA.85-201ENST00000363014 111 ntBASIC3.85□□□□□ -1.79
COL17A1Q9UMD9 Y_RNA.120-201ENST00000363304 110 ntBASIC3.85□□□□□ -1.79
COL17A1Q9UMD9 RNU6-1125P-201ENST00000363601 107 ntBASIC3.85□□□□□ -1.79
COL17A1Q9UMD9 RNU6-1228P-201ENST00000391014 107 ntBASIC3.85□□□□□ -1.79
COL17A1Q9UMD9 AL359511.1-201ENST00000402970 211 ntBASIC3.85□□□□□ -1.79
COL17A1Q9UMD9 MIR320B2-201ENST00000408479 138 ntBASIC3.85□□□□□ -1.79
COL17A1Q9UMD9 AC073261.1-201ENST00000429409 121 ntBASIC3.85□□□□□ -1.79
COL17A1Q9UMD9 AC244670.1-201ENST00000436879 112 ntBASIC3.85□□□□□ -1.79
COL17A1Q9UMD9 AC091178.2-201ENST00000584401 117 ntBASIC3.85□□□□□ -1.79
COL17A1Q9UMD9 AL359198.2-201ENST00000611836 194 ntBASIC3.85□□□□□ -1.79
COL17A1Q9UMD9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.85□□□□□ -1.79
COL17A1Q9UMD9 MIR3199-2-201ENST00000636243 86 ntBASIC3.85□□□□□ -1.79
COL17A1Q9UMD9 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.84□□□□□ -1.79
COL17A1Q9UMD9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
COL17A1Q9UMD9 Y_RNA.229-201ENST00000364347 113 ntBASIC3.84□□□□□ -1.8
COL17A1Q9UMD9 Y_RNA.287-201ENST00000364853 94 ntBASIC3.84□□□□□ -1.8
COL17A1Q9UMD9 RNU6-1134P-201ENST00000365156 101 ntBASIC3.84□□□□□ -1.8
COL17A1Q9UMD9 RNU6-597P-201ENST00000365620 102 ntBASIC3.84□□□□□ -1.8
COL17A1Q9UMD9 RPS27AP10-201ENST00000496103 208 ntBASIC3.84□□□□□ -1.8
COL17A1Q9UMD9 RNU6-436P-201ENST00000516171 114 ntBASIC3.84□□□□□ -1.8
COL17A1Q9UMD9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
COL17A1Q9UMD9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
COL17A1Q9UMD9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.83□□□□□ -1.8
COL17A1Q9UMD9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.83□□□□□ -1.8
COL17A1Q9UMD9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.83□□□□□ -1.8
COL17A1Q9UMD9 RNU6-324P-201ENST00000363957 106 ntBASIC3.83□□□□□ -1.8
COL17A1Q9UMD9 RNU6-647P-201ENST00000364243 107 ntBASIC3.83□□□□□ -1.8
COL17A1Q9UMD9 Y_RNA.549-201ENST00000384657 102 ntBASIC3.83□□□□□ -1.8
COL17A1Q9UMD9 SNORD12C-201ENST00000386307 89 ntBASIC3.83□□□□□ -1.8
COL17A1Q9UMD9 AL590004.2-201ENST00000404787 371 ntBASIC3.83□□□□□ -1.8
COL17A1Q9UMD9 RNU4-43P-201ENST00000410628 137 ntBASIC3.83□□□□□ -1.8
COL17A1Q9UMD9 AC008134.1-201ENST00000420943 193 ntBASIC3.83□□□□□ -1.8
COL17A1Q9UMD9 HMGN2P10-201ENST00000448085 265 ntBASIC3.83□□□□□ -1.8
COL17A1Q9UMD9 RNU1-61P-201ENST00000516107 151 ntBASIC3.83□□□□□ -1.8
COL17A1Q9UMD9 RNA5SP281-201ENST00000516504 135 ntBASIC3.83□□□□□ -1.8
COL17A1Q9UMD9 SNORA31.23-201ENST00000517219 133 ntBASIC3.83□□□□□ -1.8
COL17A1Q9UMD9 AC010999.1-201ENST00000611856 324 ntBASIC3.83□□□□□ -1.8
COL17A1Q9UMD9 SNORA43.4-201ENST00000629559 138 ntBASIC3.83□□□□□ -1.8
COL17A1Q9UMD9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
COL17A1Q9UMD9 RNU6-487P-201ENST00000365430 104 ntBASIC3.82□□□□□ -1.8
COL17A1Q9UMD9 Y_RNA.544-201ENST00000384650 113 ntBASIC3.82□□□□□ -1.8
COL17A1Q9UMD9 RNA5SP490-201ENST00000517141 136 ntBASIC3.82□□□□□ -1.8
COL17A1Q9UMD9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.82□□□□□ -1.8
COL17A1Q9UMD9 MIR4635-201ENST00000583759 79 ntBASIC3.82□□□□□ -1.8
COL17A1Q9UMD9 MIR3202-2-201ENST00000635980 79 ntBASIC3.82□□□□□ -1.8
COL17A1Q9UMD9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
COL17A1Q9UMD9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.82□□□□□ -1.8
COL17A1Q9UMD9 AC008264.2-201ENST00000610193 3731 ntBASIC3.81□□□□□ -1.8
COL17A1Q9UMD9 RNU6-309P-201ENST00000364573 106 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms