Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 MTND5P22-201ENST00000458380 195 ntBASIC1.86□□□□□ -2.11
LIMA1Q9UHB6 HMGB3P17-201ENST00000504195 649 ntBASIC1.86□□□□□ -2.11
LIMA1Q9UHB6 RNU6-1045P-201ENST00000516321 107 ntBASIC1.86□□□□□ -2.11
LIMA1Q9UHB6 RNU1-142P-201ENST00000516682 145 ntBASIC1.86□□□□□ -2.11
LIMA1Q9UHB6 AC027419.1-201ENST00000522976 328 ntBASIC1.86□□□□□ -2.11
LIMA1Q9UHB6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.86□□□□□ -2.11
LIMA1Q9UHB6 AL390123.1-201ENST00000603216 237 ntBASIC1.86□□□□□ -2.11
LIMA1Q9UHB6 AC240442.1-201ENST00000616055 283 ntBASIC1.86□□□□□ -2.11
LIMA1Q9UHB6 U6.73-201ENST00000619194 103 ntBASIC1.86□□□□□ -2.11
LIMA1Q9UHB6 U6.108-201ENST00000637764 58 ntBASIC1.86□□□□□ -2.11
LIMA1Q9UHB6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 RNU6-661P-201ENST00000362409 107 ntBASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 Y_RNA.26-201ENST00000362539 101 ntBASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 Y_RNA.105-201ENST00000363182 111 ntBASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 RNU6-961P-201ENST00000363893 105 ntBASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 RNU6-454P-201ENST00000364292 107 ntBASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 RNU4-50P-201ENST00000364361 141 ntBASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 RNU6-1310P-201ENST00000384153 107 ntBASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 SNORA20B-201ENST00000384220 132 ntBASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 AL355796.1-201ENST00000406706 323 ntBASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 RNU6-1186P-201ENST00000410429 97 ntBASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 HSPE1P9-201ENST00000440046 311 ntBASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 RPS27P22-201ENST00000478056 241 ntBASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 RNU6-397P-201ENST00000516226 104 ntBASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 Y_RNA.721-201ENST00000517207 102 ntBASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 AC131281.1-201ENST00000522984 164 ntBASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 MIR4659A-201ENST00000580269 81 ntBASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 MIR4438-201ENST00000585271 93 ntBASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 AL121655.1-201ENST00000605811 308 ntBASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 AC010205.1-201ENST00000616668 449 ntBASIC1.85□□□□□ -2.11
LIMA1Q9UHB6 AL356292.1-201ENST00000283110 373 ntBASIC1.84□□□□□ -2.11
LIMA1Q9UHB6 Y_RNA.133-201ENST00000363428 110 ntBASIC1.84□□□□□ -2.11
LIMA1Q9UHB6 Y_RNA.471-201ENST00000384312 102 ntBASIC1.84□□□□□ -2.11
LIMA1Q9UHB6 Y_RNA.551-201ENST00000384661 102 ntBASIC1.84□□□□□ -2.11
LIMA1Q9UHB6 RNU6-1105P-201ENST00000384774 107 ntBASIC1.84□□□□□ -2.11
LIMA1Q9UHB6 RPL21P1-201ENST00000399532 476 ntBASIC1.84□□□□□ -2.11
LIMA1Q9UHB6 MRPL35P1-201ENST00000404272 572 ntBASIC1.84□□□□□ -2.11
LIMA1Q9UHB6 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.84□□□□□ -2.11
LIMA1Q9UHB6 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.84□□□□□ -2.11
LIMA1Q9UHB6 MRPS10P1-201ENST00000448483 130 ntBASIC1.84□□□□□ -2.11
LIMA1Q9UHB6 RPS26P45-201ENST00000471748 340 ntBASIC1.84□□□□□ -2.11
LIMA1Q9UHB6 AL163195.1-201ENST00000496941 348 ntBASIC1.84□□□□□ -2.11
LIMA1Q9UHB6 RNA5SP481-201ENST00000516814 122 ntBASIC1.84□□□□□ -2.11
LIMA1Q9UHB6 RNU7-128P-201ENST00000517247 62 ntBASIC1.84□□□□□ -2.11
LIMA1Q9UHB6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.84□□□□□ -2.11
LIMA1Q9UHB6 AC023157.2-201ENST00000540596 141 ntBASIC1.84□□□□□ -2.11
LIMA1Q9UHB6 AL117187.1-201ENST00000555482 181 ntBASIC1.84□□□□□ -2.11
LIMA1Q9UHB6 AC055872.1-201ENST00000570978 278 ntBASIC1.84□□□□□ -2.11
LIMA1Q9UHB6 AL355297.3-201ENST00000604082 446 ntBASIC1.84□□□□□ -2.11
LIMA1Q9UHB6 U6.115-201ENST00000636045 103 ntBASIC1.84□□□□□ -2.11
LIMA1Q9UHB6 Y_RNA.210-201ENST00000364161 110 ntBASIC1.83□□□□□ -2.12
LIMA1Q9UHB6 Y_RNA.214-201ENST00000364201 112 ntBASIC1.83□□□□□ -2.12
LIMA1Q9UHB6 RNU6-806P-201ENST00000365147 105 ntBASIC1.83□□□□□ -2.12
LIMA1Q9UHB6 Y_RNA.380-201ENST00000365663 111 ntBASIC1.83□□□□□ -2.12
LIMA1Q9UHB6 Y_RNA.526-201ENST00000384572 110 ntBASIC1.83□□□□□ -2.12
LIMA1Q9UHB6 RNU6-121P-201ENST00000410525 99 ntBASIC1.83□□□□□ -2.12
LIMA1Q9UHB6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.83□□□□□ -2.12
LIMA1Q9UHB6 ELOCP20-201ENST00000422460 345 ntBASIC1.83□□□□□ -2.12
LIMA1Q9UHB6 AC005002.2-201ENST00000438228 269 ntBASIC1.83□□□□□ -2.12
LIMA1Q9UHB6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
LIMA1Q9UHB6 AC073910.1-201ENST00000445047 438 ntBASIC1.83□□□□□ -2.12
LIMA1Q9UHB6 RPL36AP21-201ENST00000490372 323 ntBASIC1.83□□□□□ -2.12
LIMA1Q9UHB6 MRPS35P2-201ENST00000508242 191 ntBASIC1.83□□□□□ -2.12
LIMA1Q9UHB6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.83□□□□□ -2.12
LIMA1Q9UHB6 RNU6-897P-201ENST00000517135 105 ntBASIC1.83□□□□□ -2.12
LIMA1Q9UHB6 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.83□□□□□ -2.12
LIMA1Q9UHB6 AC136932.1-201ENST00000574771 208 ntBASIC1.83□□□□□ -2.12
LIMA1Q9UHB6 RPS29P30-201ENST00000600975 111 ntBASIC1.83□□□□□ -2.12
LIMA1Q9UHB6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
LIMA1Q9UHB6 RNA5SP363-201ENST00000365072 115 ntBASIC1.82□□□□□ -2.12
LIMA1Q9UHB6 SNORA63.7-201ENST00000365579 123 ntBASIC1.82□□□□□ -2.12
LIMA1Q9UHB6 Y_RNA.459-201ENST00000384251 102 ntBASIC1.82□□□□□ -2.12
LIMA1Q9UHB6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
LIMA1Q9UHB6 RPL31P63-201ENST00000422565 375 ntBASIC1.82□□□□□ -2.12
LIMA1Q9UHB6 AC025465.3-201ENST00000510570 311 ntBASIC1.82□□□□□ -2.12
LIMA1Q9UHB6 RNU1-41P-201ENST00000516161 162 ntBASIC1.82□□□□□ -2.12
LIMA1Q9UHB6 RNU7-99P-201ENST00000516271 62 ntBASIC1.82□□□□□ -2.12
LIMA1Q9UHB6 RNU1-48P-201ENST00000516400 162 ntBASIC1.82□□□□□ -2.12
LIMA1Q9UHB6 RNU6-966P-201ENST00000516479 104 ntBASIC1.82□□□□□ -2.12
LIMA1Q9UHB6 AC005828.6-201ENST00000606610 232 ntBASIC1.82□□□□□ -2.12
LIMA1Q9UHB6 AC084768.2-201ENST00000622736 221 ntBASIC1.82□□□□□ -2.12
LIMA1Q9UHB6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
LIMA1Q9UHB6 SNORA27.1-201ENST00000362604 124 ntBASIC1.81□□□□□ -2.12
LIMA1Q9UHB6 SNORD114-1-201ENST00000362705 72 ntBASIC1.81□□□□□ -2.12
LIMA1Q9UHB6 RNU6-1309P-201ENST00000363305 108 ntBASIC1.81□□□□□ -2.12
LIMA1Q9UHB6 Y_RNA.276-201ENST00000364732 109 ntBASIC1.81□□□□□ -2.12
LIMA1Q9UHB6 Y_RNA.512-201ENST00000384518 102 ntBASIC1.81□□□□□ -2.12
LIMA1Q9UHB6 MIR568-201ENST00000385036 95 ntBASIC1.81□□□□□ -2.12
LIMA1Q9UHB6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
LIMA1Q9UHB6 RNU6-360P-201ENST00000390944 104 ntBASIC1.81□□□□□ -2.12
LIMA1Q9UHB6 RNA5SP109-201ENST00000391010 116 ntBASIC1.81□□□□□ -2.12
LIMA1Q9UHB6 SNORA40.18-201ENST00000391200 128 ntBASIC1.81□□□□□ -2.12
LIMA1Q9UHB6 AL121890.1-201ENST00000435457 205 ntBASIC1.81□□□□□ -2.12
LIMA1Q9UHB6 SUMO1P2-201ENST00000452524 304 ntBASIC1.81□□□□□ -2.12
LIMA1Q9UHB6 HMGN2P23-201ENST00000456759 269 ntBASIC1.81□□□□□ -2.12
LIMA1Q9UHB6 AC097462.1-201ENST00000514125 324 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms