Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
COL20A1Q9P218 SNORA27.1-201ENST00000362604 124 ntBASIC2.33□□□□□ -2.04
COL20A1Q9P218 Y_RNA.286-201ENST00000364813 102 ntBASIC2.33□□□□□ -2.04
COL20A1Q9P218 MIR215-201ENST00000384858 110 ntBASIC2.33□□□□□ -2.04
COL20A1Q9P218 RNU11-5P-201ENST00000391216 129 ntBASIC2.33□□□□□ -2.04
COL20A1Q9P218 AL355796.1-201ENST00000406706 323 ntBASIC2.33□□□□□ -2.04
COL20A1Q9P218 AC104435.1-201ENST00000483483 166 ntBASIC2.33□□□□□ -2.04
COL20A1Q9P218 RNU6-436P-201ENST00000516171 114 ntBASIC2.33□□□□□ -2.04
COL20A1Q9P218 RNU7-193P-201ENST00000516723 65 ntBASIC2.33□□□□□ -2.04
COL20A1Q9P218 SNORA31.25-201ENST00000517242 134 ntBASIC2.33□□□□□ -2.04
COL20A1Q9P218 AP005660.1-201ENST00000522972 293 ntBASIC2.33□□□□□ -2.04
COL20A1Q9P218 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.33□□□□□ -2.04
COL20A1Q9P218 AC009127.3-201ENST00000570531 403 ntBASIC2.33□□□□□ -2.04
COL20A1Q9P218 SNRPGP19-201ENST00000603826 189 ntBASIC2.33□□□□□ -2.04
COL20A1Q9P218 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.33□□□□□ -2.04
COL20A1Q9P218 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.33□□□□□ -2.04
COL20A1Q9P218 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
COL20A1Q9P218 MIR335-201ENST00000362173 94 ntBASIC2.32□□□□□ -2.04
COL20A1Q9P218 Y_RNA.288-201ENST00000364854 92 ntBASIC2.32□□□□□ -2.04
COL20A1Q9P218 RNU6-407P-201ENST00000365280 104 ntBASIC2.32□□□□□ -2.04
COL20A1Q9P218 RNU6-326P-201ENST00000365480 107 ntBASIC2.32□□□□□ -2.04
COL20A1Q9P218 Y_RNA.361-201ENST00000365515 120 ntBASIC2.32□□□□□ -2.04
COL20A1Q9P218 Y_RNA.396-201ENST00000383949 103 ntBASIC2.32□□□□□ -2.04
COL20A1Q9P218 Y_RNA.401-201ENST00000383965 117 ntBASIC2.32□□□□□ -2.04
COL20A1Q9P218 RNU6-574P-201ENST00000384265 107 ntBASIC2.32□□□□□ -2.04
COL20A1Q9P218 MT-TW-201ENST00000387382 68 ntBASIC2.32□□□□□ -2.04
COL20A1Q9P218 U8.13-201ENST00000390842 128 ntBASIC2.32□□□□□ -2.04
COL20A1Q9P218 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.32□□□□□ -2.04
COL20A1Q9P218 CST2P1-201ENST00000425770 87 ntBASIC2.32□□□□□ -2.04
COL20A1Q9P218 RPS27P22-201ENST00000478056 241 ntBASIC2.32□□□□□ -2.04
COL20A1Q9P218 RNA5SP82-201ENST00000516707 92 ntBASIC2.32□□□□□ -2.04
COL20A1Q9P218 RNU2-31P-201ENST00000516954 155 ntBASIC2.32□□□□□ -2.04
COL20A1Q9P218 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.32□□□□□ -2.04
COL20A1Q9P218 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.32□□□□□ -2.04
COL20A1Q9P218 MIR338-201ENST00000636369 67 ntBASIC2.32□□□□□ -2.04
COL20A1Q9P218 ZNF720P1-201ENST00000562403 1939 ntBASIC2.32□□□□□ -2.04
COL20A1Q9P218 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.31□□□□□ -2.04
COL20A1Q9P218 Y_RNA.329-201ENST00000365209 107 ntBASIC2.31□□□□□ -2.04
COL20A1Q9P218 RNU6-514P-201ENST00000384208 107 ntBASIC2.31□□□□□ -2.04
COL20A1Q9P218 Y_RNA.483-201ENST00000384380 101 ntBASIC2.31□□□□□ -2.04
COL20A1Q9P218 RNU6-102P-201ENST00000384485 104 ntBASIC2.31□□□□□ -2.04
COL20A1Q9P218 Y_RNA.541-201ENST00000384640 113 ntBASIC2.31□□□□□ -2.04
COL20A1Q9P218 RNU6-417P-201ENST00000384712 107 ntBASIC2.31□□□□□ -2.04
COL20A1Q9P218 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
COL20A1Q9P218 MIR1283-2-201ENST00000408621 87 ntBASIC2.31□□□□□ -2.04
COL20A1Q9P218 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
COL20A1Q9P218 RPL23AP7-203ENST00000449021 469 ntBASIC2.31□□□□□ -2.04
COL20A1Q9P218 RPL23AP3-201ENST00000453844 468 ntBASIC2.31□□□□□ -2.04
COL20A1Q9P218 snoU13.23-201ENST00000458863 104 ntBASIC2.31□□□□□ -2.04
COL20A1Q9P218 RNA5SP20-201ENST00000515976 84 ntBASIC2.31□□□□□ -2.04
COL20A1Q9P218 RNU6-1338P-201ENST00000516328 91 ntBASIC2.31□□□□□ -2.04
COL20A1Q9P218 AC027419.1-201ENST00000522976 328 ntBASIC2.31□□□□□ -2.04
COL20A1Q9P218 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.31□□□□□ -2.04
COL20A1Q9P218 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.31□□□□□ -2.04
COL20A1Q9P218 MIR4524B-201ENST00000581569 115 ntBASIC2.31□□□□□ -2.04
COL20A1Q9P218 AC007229.1-201ENST00000590455 412 ntBASIC2.31□□□□□ -2.04
COL20A1Q9P218 AP001282.2-201ENST00000616149 309 ntBASIC2.31□□□□□ -2.04
COL20A1Q9P218 U1.36-201ENST00000620684 176 ntBASIC2.31□□□□□ -2.04
COL20A1Q9P218 AC010615.1-201ENST00000594254 1764 ntBASIC2.31□□□□□ -2.04
COL20A1Q9P218 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
COL20A1Q9P218 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
COL20A1Q9P218 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
COL20A1Q9P218 Y_RNA.136-201ENST00000363444 102 ntBASIC2.3□□□□□ -2.04
COL20A1Q9P218 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
COL20A1Q9P218 RNU2-61P-201ENST00000411069 191 ntBASIC2.3□□□□□ -2.04
COL20A1Q9P218 MRPS10P1-201ENST00000448483 130 ntBASIC2.3□□□□□ -2.04
COL20A1Q9P218 AC011753.1-201ENST00000451001 220 ntBASIC2.3□□□□□ -2.04
COL20A1Q9P218 HSPE1P13-201ENST00000451143 297 ntBASIC2.3□□□□□ -2.04
COL20A1Q9P218 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.3□□□□□ -2.04
COL20A1Q9P218 RNU6-966P-201ENST00000516479 104 ntBASIC2.3□□□□□ -2.04
COL20A1Q9P218 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.3□□□□□ -2.04
COL20A1Q9P218 MIR5089-201ENST00000580047 84 ntBASIC2.3□□□□□ -2.04
COL20A1Q9P218 MIR4438-201ENST00000585271 93 ntBASIC2.3□□□□□ -2.04
COL20A1Q9P218 AC062037.2-201ENST00000610137 73 ntBASIC2.3□□□□□ -2.04
COL20A1Q9P218 U6.73-201ENST00000619194 103 ntBASIC2.3□□□□□ -2.04
COL20A1Q9P218 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.3□□□□□ -2.04
COL20A1Q9P218 MIR203B-201ENST00000636080 86 ntBASIC2.3□□□□□ -2.04
COL20A1Q9P218 AL391987.6-201ENST00000305671 199 ntBASIC2.29□□□□□ -2.04
COL20A1Q9P218 SNORA25.1-201ENST00000362326 128 ntBASIC2.29□□□□□ -2.04
COL20A1Q9P218 RNU1-96P-201ENST00000364163 162 ntBASIC2.29□□□□□ -2.04
COL20A1Q9P218 Y_RNA.287-201ENST00000364853 94 ntBASIC2.29□□□□□ -2.04
COL20A1Q9P218 RNU6-505P-201ENST00000384427 107 ntBASIC2.29□□□□□ -2.04
COL20A1Q9P218 MIR597-201ENST00000384968 97 ntBASIC2.29□□□□□ -2.04
COL20A1Q9P218 SNORD23.1-201ENST00000408212 104 ntBASIC2.29□□□□□ -2.04
COL20A1Q9P218 MTND2P29-201ENST00000438595 412 ntBASIC2.29□□□□□ -2.04
COL20A1Q9P218 SNORD127-201ENST00000458892 86 ntBASIC2.29□□□□□ -2.04
COL20A1Q9P218 RPS26P55-201ENST00000471178 356 ntBASIC2.29□□□□□ -2.04
COL20A1Q9P218 RNU1-142P-201ENST00000516682 145 ntBASIC2.29□□□□□ -2.04
COL20A1Q9P218 AC024995.1-201ENST00000523014 93 ntBASIC2.29□□□□□ -2.04
COL20A1Q9P218 DEFB117-201ENST00000602356 141 ntBASIC2.29□□□□□ -2.04
COL20A1Q9P218 AL359075.3-201ENST00000613288 217 ntBASIC2.29□□□□□ -2.04
COL20A1Q9P218 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
COL20A1Q9P218 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
COL20A1Q9P218 ZNF355P-201ENST00000427301 3216 ntBASIC2.28□□□□□ -2.04
COL20A1Q9P218 RNU6-862P-201ENST00000362804 105 ntBASIC2.28□□□□□ -2.04
COL20A1Q9P218 RNA5SP323-201ENST00000391094 133 ntBASIC2.28□□□□□ -2.04
COL20A1Q9P218 AL117342.1-201ENST00000404861 406 ntBASIC2.28□□□□□ -2.04
COL20A1Q9P218 Y_RNA.618-201ENST00000410949 107 ntBASIC2.28□□□□□ -2.04
COL20A1Q9P218 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.28□□□□□ -2.04
COL20A1Q9P218 RNU6-1278P-201ENST00000516130 107 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms