Protein–RNA interactions for Protein: Q9NY59

SMPD3, Sphingomyelin phosphodiesterase 3, humanhuman

Predicted RBP Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3Q9NY59 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SMPD3Q9NY59 RNU6-99P-201ENST00000364721 107 ntBASIC1.04□□□□□ -2.24
SMPD3Q9NY59 RNU6-407P-201ENST00000365280 104 ntBASIC1.04□□□□□ -2.24
SMPD3Q9NY59 Y_RNA.338-201ENST00000365320 114 ntBASIC1.04□□□□□ -2.24
SMPD3Q9NY59 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.04□□□□□ -2.24
SMPD3Q9NY59 PDCL2P1-201ENST00000419302 352 ntBASIC1.04□□□□□ -2.24
SMPD3Q9NY59 MIR2053-201ENST00000459295 91 ntBASIC1.04□□□□□ -2.24
SMPD3Q9NY59 RNU6-625P-201ENST00000459412 107 ntBASIC1.04□□□□□ -2.24
SMPD3Q9NY59 UBL5P1-201ENST00000507979 193 ntBASIC1.04□□□□□ -2.24
SMPD3Q9NY59 SNORA40.9-201ENST00000515895 93 ntBASIC1.04□□□□□ -2.24
SMPD3Q9NY59 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.04□□□□□ -2.24
SMPD3Q9NY59 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
SMPD3Q9NY59 AC016727.1-205ENST00000605437 569 ntBASIC1.04□□□□□ -2.24
SMPD3Q9NY59 AC073349.3-201ENST00000617616 186 ntBASIC1.04□□□□□ -2.24
SMPD3Q9NY59 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.04□□□□□ -2.24
SMPD3Q9NY59 MIR378A-201ENST00000362177 66 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 MIR410-201ENST00000362222 80 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 RNU6-457P-201ENST00000363999 107 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 RNU6-318P-201ENST00000384283 103 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.03□□□□□ -2.24
SMPD3Q9NY59 FGF7P8-201ENST00000402994 292 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 RNA5SP475-201ENST00000410568 110 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 RNU4-14P-201ENST00000410858 122 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 RNU6-370P-201ENST00000411008 104 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 AC114482.1-201ENST00000418010 247 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 AC018865.2-201ENST00000423631 129 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.03□□□□□ -2.24
SMPD3Q9NY59 RAB28P5-201ENST00000427490 651 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 STAG3L5P-204ENST00000443759 179 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 HSPE1P13-201ENST00000451143 297 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 RNA5SP20-201ENST00000515976 84 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 SNORA70.22-201ENST00000517160 124 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 MIR2355-201ENST00000517199 87 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 DNAJC19P9-201ENST00000555084 351 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 SNORA28-201ENST00000606769 126 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 SNORD3E-202ENST00000627253 216 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 MIR6079-201ENST00000635807 62 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 MIR3674-201ENST00000636576 68 ntBASIC1.03□□□□□ -2.24
SMPD3Q9NY59 SNORA27.1-201ENST00000362604 124 ntBASIC1.02□□□□□ -2.25
SMPD3Q9NY59 SNORD81.2-201ENST00000365153 76 ntBASIC1.02□□□□□ -2.25
SMPD3Q9NY59 MIR562-201ENST00000384894 95 ntBASIC1.02□□□□□ -2.25
SMPD3Q9NY59 SNORA12.1-201ENST00000390873 148 ntBASIC1.02□□□□□ -2.25
SMPD3Q9NY59 SNORD12B-201ENST00000410433 91 ntBASIC1.02□□□□□ -2.25
SMPD3Q9NY59 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.02□□□□□ -2.25
SMPD3Q9NY59 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.02□□□□□ -2.25
SMPD3Q9NY59 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.02□□□□□ -2.25
SMPD3Q9NY59 RNU6-264P-201ENST00000517134 104 ntBASIC1.02□□□□□ -2.25
SMPD3Q9NY59 RNU6-165P-201ENST00000517170 99 ntBASIC1.02□□□□□ -2.25
SMPD3Q9NY59 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.02□□□□□ -2.25
SMPD3Q9NY59 AP000942.3-201ENST00000603702 160 ntBASIC1.02□□□□□ -2.25
SMPD3Q9NY59 AC022306.2-201ENST00000617563 647 ntBASIC1.02□□□□□ -2.25
SMPD3Q9NY59 Y_RNA.140-201ENST00000363474 103 ntBASIC1.01□□□□□ -2.25
SMPD3Q9NY59 Y_RNA.265-201ENST00000364677 108 ntBASIC1.01□□□□□ -2.25
SMPD3Q9NY59 SNORA22-201ENST00000383907 134 ntBASIC1.01□□□□□ -2.25
SMPD3Q9NY59 SNORA22C-201ENST00000384614 134 ntBASIC1.01□□□□□ -2.25
SMPD3Q9NY59 RNU6-376P-201ENST00000384731 106 ntBASIC1.01□□□□□ -2.25
SMPD3Q9NY59 MIR625-201ENST00000385047 85 ntBASIC1.01□□□□□ -2.25
SMPD3Q9NY59 SNORD12-201ENST00000391002 90 ntBASIC1.01□□□□□ -2.25
SMPD3Q9NY59 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.01□□□□□ -2.25
SMPD3Q9NY59 AC091021.1-201ENST00000468051 388 ntBASIC1.01□□□□□ -2.25
SMPD3Q9NY59 AC092991.1-201ENST00000477176 376 ntBASIC1.01□□□□□ -2.25
SMPD3Q9NY59 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.01□□□□□ -2.25
SMPD3Q9NY59 RNU6-1278P-201ENST00000516130 107 ntBASIC1.01□□□□□ -2.25
SMPD3Q9NY59 RNU2-56P-201ENST00000516826 190 ntBASIC1.01□□□□□ -2.25
SMPD3Q9NY59 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.01□□□□□ -2.25
SMPD3Q9NY59 AC136932.1-201ENST00000574771 208 ntBASIC1.01□□□□□ -2.25
SMPD3Q9NY59 MIR4421-201ENST00000578133 69 ntBASIC1.01□□□□□ -2.25
SMPD3Q9NY59 MIR4661-201ENST00000582720 75 ntBASIC1.01□□□□□ -2.25
SMPD3Q9NY59 MIR5690-201ENST00000583739 73 ntBASIC1.01□□□□□ -2.25
SMPD3Q9NY59 AC080078.3-201ENST00000605407 463 ntBASIC1.01□□□□□ -2.25
SMPD3Q9NY59 U6.115-201ENST00000636045 103 ntBASIC1.01□□□□□ -2.25
SMPD3Q9NY59 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1□□□□□ -2.25
SMPD3Q9NY59 RNU6-1301P-201ENST00000362724 104 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 SNORA7.1-201ENST00000363750 139 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 RNU6-1188P-201ENST00000363795 107 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 RNA5SP99-201ENST00000364020 114 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 RNU4-76P-201ENST00000364509 141 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 Y_RNA.267-201ENST00000364679 109 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 Y_RNA.577-201ENST00000384794 101 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 MIR19B1-201ENST00000384829 87 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 MIR660-201ENST00000385235 97 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 SNORA69.1-201ENST00000390904 137 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 SNORA75.6-201ENST00000391318 127 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 MIR873-201ENST00000401120 77 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 Y_RNA.646-201ENST00000410980 101 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 AC108667.1-201ENST00000428618 249 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 DYNLT3P2-201ENST00000442517 295 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 SUMO1P2-201ENST00000452524 304 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 AL163540.1-201ENST00000485382 386 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 AC082651.2-201ENST00000496833 166 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1□□□□□ -2.25
SMPD3Q9NY59 AP002001.1-203ENST00000534002 267 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 MIR4303-201ENST00000581299 66 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 GHRLOS.1-201ENST00000610995 70 ntBASIC1□□□□□ -2.25
SMPD3Q9NY59 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
SMPD3Q9NY59 RNU6-454P-201ENST00000364292 107 ntBASIC0.99□□□□□ -2.25
SMPD3Q9NY59 RNU6-1310P-201ENST00000384153 107 ntBASIC0.99□□□□□ -2.25
SMPD3Q9NY59 RNU6-505P-201ENST00000384427 107 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 201.6 ms