Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AL512310.8-201ENST00000550183 120 ntBASIC1.38□□□□□ -2.19
CHCHD3Q9NX63 AC015712.3-201ENST00000559380 164 ntBASIC1.38□□□□□ -2.19
CHCHD3Q9NX63 AC091178.2-201ENST00000584401 117 ntBASIC1.38□□□□□ -2.19
CHCHD3Q9NX63 BX248123.2-201ENST00000606318 124 ntBASIC1.38□□□□□ -2.19
CHCHD3Q9NX63 AL365434.2-201ENST00000607979 234 ntBASIC1.38□□□□□ -2.19
CHCHD3Q9NX63 AL353997.5-201ENST00000618886 171 ntBASIC1.38□□□□□ -2.19
CHCHD3Q9NX63 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.38□□□□□ -2.19
CHCHD3Q9NX63 Y_RNA.259-201ENST00000364619 101 ntBASIC1.37□□□□□ -2.19
CHCHD3Q9NX63 SNORA25.8-201ENST00000364831 128 ntBASIC1.37□□□□□ -2.19
CHCHD3Q9NX63 AC015922.2-201ENST00000435593 184 ntBASIC1.37□□□□□ -2.19
CHCHD3Q9NX63 HSPE1P13-201ENST00000451143 297 ntBASIC1.37□□□□□ -2.19
CHCHD3Q9NX63 RNU6-250P-201ENST00000516958 103 ntBASIC1.37□□□□□ -2.19
CHCHD3Q9NX63 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.37□□□□□ -2.19
CHCHD3Q9NX63 AC006380.1-201ENST00000603598 186 ntBASIC1.37□□□□□ -2.19
CHCHD3Q9NX63 RBM11P1-201ENST00000604951 799 ntBASIC1.37□□□□□ -2.19
CHCHD3Q9NX63 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.37□□□□□ -2.19
CHCHD3Q9NX63 AC127459.3-201ENST00000624328 466 ntBASIC1.37□□□□□ -2.19
CHCHD3Q9NX63 SNORD3E-202ENST00000627253 216 ntBASIC1.37□□□□□ -2.19
CHCHD3Q9NX63 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CHCHD3Q9NX63 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CHCHD3Q9NX63 Y_RNA.265-201ENST00000364677 108 ntBASIC1.36□□□□□ -2.19
CHCHD3Q9NX63 RNU6-1283P-201ENST00000365314 105 ntBASIC1.36□□□□□ -2.19
CHCHD3Q9NX63 MIR628-201ENST00000385229 95 ntBASIC1.36□□□□□ -2.19
CHCHD3Q9NX63 MIR618-201ENST00000385287 98 ntBASIC1.36□□□□□ -2.19
CHCHD3Q9NX63 STAG3L5P-204ENST00000443759 179 ntBASIC1.36□□□□□ -2.19
CHCHD3Q9NX63 AL163540.1-201ENST00000485382 386 ntBASIC1.36□□□□□ -2.19
CHCHD3Q9NX63 RNU2-12P-201ENST00000517216 168 ntBASIC1.36□□□□□ -2.19
CHCHD3Q9NX63 AL513534.2-201ENST00000603836 250 ntBASIC1.36□□□□□ -2.19
CHCHD3Q9NX63 AL021879.1-201ENST00000611756 288 ntBASIC1.36□□□□□ -2.19
CHCHD3Q9NX63 MIR6845-201ENST00000613182 61 ntBASIC1.36□□□□□ -2.19
CHCHD3Q9NX63 AL138825.1-201ENST00000618587 192 ntBASIC1.36□□□□□ -2.19
CHCHD3Q9NX63 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.35□□□□□ -2.19
CHCHD3Q9NX63 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CHCHD3Q9NX63 RNU6-454P-201ENST00000364292 107 ntBASIC1.35□□□□□ -2.19
CHCHD3Q9NX63 RNU4-76P-201ENST00000364509 141 ntBASIC1.35□□□□□ -2.19
CHCHD3Q9NX63 RNU6-117P-201ENST00000365415 107 ntBASIC1.35□□□□□ -2.19
CHCHD3Q9NX63 RNY4P36-201ENST00000391116 96 ntBASIC1.35□□□□□ -2.19
CHCHD3Q9NX63 MIR1289-2-201ENST00000408360 111 ntBASIC1.35□□□□□ -2.19
CHCHD3Q9NX63 Y_RNA.605-201ENST00000410577 105 ntBASIC1.35□□□□□ -2.19
CHCHD3Q9NX63 MTCO2P27-201ENST00000420740 428 ntBASIC1.35□□□□□ -2.19
CHCHD3Q9NX63 AL135790.2-201ENST00000437701 267 ntBASIC1.35□□□□□ -2.19
CHCHD3Q9NX63 RPL30P15-201ENST00000457129 321 ntBASIC1.35□□□□□ -2.19
CHCHD3Q9NX63 FGF7P4-201ENST00000509595 295 ntBASIC1.35□□□□□ -2.19
CHCHD3Q9NX63 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
CHCHD3Q9NX63 AC019288.1-201ENST00000557918 224 ntBASIC1.35□□□□□ -2.19
CHCHD3Q9NX63 SNORD53B-201ENST00000577887 78 ntBASIC1.35□□□□□ -2.19
CHCHD3Q9NX63 MIR3664-201ENST00000579074 99 ntBASIC1.35□□□□□ -2.19
CHCHD3Q9NX63 MIR8065-201ENST00000620577 100 ntBASIC1.35□□□□□ -2.19
CHCHD3Q9NX63 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.35□□□□□ -2.19
CHCHD3Q9NX63 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
CHCHD3Q9NX63 Y_RNA.230-201ENST00000364348 109 ntBASIC1.34□□□□□ -2.19
CHCHD3Q9NX63 MIR517C-201ENST00000385103 95 ntBASIC1.34□□□□□ -2.19
CHCHD3Q9NX63 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
CHCHD3Q9NX63 RNU5A-5P-201ENST00000411054 116 ntBASIC1.34□□□□□ -2.19
CHCHD3Q9NX63 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.34□□□□□ -2.19
CHCHD3Q9NX63 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.34□□□□□ -2.19
CHCHD3Q9NX63 AC091021.1-201ENST00000468051 388 ntBASIC1.34□□□□□ -2.19
CHCHD3Q9NX63 RN7SKP179-201ENST00000516126 217 ntBASIC1.34□□□□□ -2.19
CHCHD3Q9NX63 SUMO2P16-201ENST00000519475 264 ntBASIC1.34□□□□□ -2.19
CHCHD3Q9NX63 AP002001.1-203ENST00000534002 267 ntBASIC1.34□□□□□ -2.19
CHCHD3Q9NX63 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.34□□□□□ -2.19
CHCHD3Q9NX63 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
CHCHD3Q9NX63 RNU6-199P-201ENST00000362954 107 ntBASIC1.33□□□□□ -2.2
CHCHD3Q9NX63 RNU6-1040P-201ENST00000383974 107 ntBASIC1.33□□□□□ -2.2
CHCHD3Q9NX63 RNU6-424P-201ENST00000384367 105 ntBASIC1.33□□□□□ -2.2
CHCHD3Q9NX63 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.33□□□□□ -2.2
CHCHD3Q9NX63 RNU6-408P-201ENST00000515910 100 ntBASIC1.33□□□□□ -2.2
CHCHD3Q9NX63 RNU6-322P-201ENST00000516010 103 ntBASIC1.33□□□□□ -2.2
CHCHD3Q9NX63 RNU6-277P-201ENST00000516272 106 ntBASIC1.33□□□□□ -2.2
CHCHD3Q9NX63 AC005730.3-201ENST00000583067 366 ntBASIC1.33□□□□□ -2.2
CHCHD3Q9NX63 MIR8081-201ENST00000611533 95 ntBASIC1.33□□□□□ -2.2
CHCHD3Q9NX63 U2.1-201ENST00000618978 145 ntBASIC1.33□□□□□ -2.2
CHCHD3Q9NX63 Y_RNA.27-201ENST00000362540 103 ntBASIC1.32□□□□□ -2.2
CHCHD3Q9NX63 SNORA72.1-201ENST00000363485 129 ntBASIC1.32□□□□□ -2.2
CHCHD3Q9NX63 SNORD115-30-201ENST00000364117 82 ntBASIC1.32□□□□□ -2.2
CHCHD3Q9NX63 SNORA12.1-201ENST00000390873 148 ntBASIC1.32□□□□□ -2.2
CHCHD3Q9NX63 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.32□□□□□ -2.2
CHCHD3Q9NX63 MTCO3P10-201ENST00000455912 772 ntBASIC1.32□□□□□ -2.2
CHCHD3Q9NX63 RNU7-152P-201ENST00000458982 64 ntBASIC1.32□□□□□ -2.2
CHCHD3Q9NX63 U8.19-201ENST00000459095 133 ntBASIC1.32□□□□□ -2.2
CHCHD3Q9NX63 RNU6-1012P-201ENST00000516606 109 ntBASIC1.32□□□□□ -2.2
CHCHD3Q9NX63 RN7SKP88-201ENST00000516847 250 ntBASIC1.32□□□□□ -2.2
CHCHD3Q9NX63 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.32□□□□□ -2.2
CHCHD3Q9NX63 AL132765.2-201ENST00000610812 351 ntBASIC1.32□□□□□ -2.2
CHCHD3Q9NX63 7SK.8-201ENST00000612110 250 ntBASIC1.32□□□□□ -2.2
CHCHD3Q9NX63 7SK.11-201ENST00000615477 250 ntBASIC1.32□□□□□ -2.2
CHCHD3Q9NX63 7SK.13-201ENST00000622040 250 ntBASIC1.32□□□□□ -2.2
CHCHD3Q9NX63 MIR1302-1-201ENST00000637932 143 ntBASIC1.32□□□□□ -2.2
CHCHD3Q9NX63 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
CHCHD3Q9NX63 Y_RNA.314-201ENST00000365114 102 ntBASIC1.31□□□□□ -2.2
CHCHD3Q9NX63 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.31□□□□□ -2.2
CHCHD3Q9NX63 RNU6-505P-201ENST00000384427 107 ntBASIC1.31□□□□□ -2.2
CHCHD3Q9NX63 MIR559-201ENST00000385188 96 ntBASIC1.31□□□□□ -2.2
CHCHD3Q9NX63 MIR653-201ENST00000385279 96 ntBASIC1.31□□□□□ -2.2
CHCHD3Q9NX63 RNU2-54P-201ENST00000410299 190 ntBASIC1.31□□□□□ -2.2
CHCHD3Q9NX63 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.31□□□□□ -2.2
CHCHD3Q9NX63 SNRPGP13-201ENST00000442212 177 ntBASIC1.31□□□□□ -2.2
CHCHD3Q9NX63 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.31□□□□□ -2.2
CHCHD3Q9NX63 OR9P1P-201ENST00000496431 281 ntBASIC1.31□□□□□ -2.2
CHCHD3Q9NX63 AC105758.1-201ENST00000506038 399 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms