Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL512604.1-201ENST00000404812 257 ntBASIC1.95□□□□□ -2.1
PCDH9Q9HC56 RN7SKP284-201ENST00000411002 343 ntBASIC1.95□□□□□ -2.1
PCDH9Q9HC56 RNU6-1199P-201ENST00000411249 104 ntBASIC1.95□□□□□ -2.1
PCDH9Q9HC56 AC016909.1-201ENST00000415916 166 ntBASIC1.95□□□□□ -2.1
PCDH9Q9HC56 AL390729.2-201ENST00000416137 156 ntBASIC1.95□□□□□ -2.1
PCDH9Q9HC56 HMGN2P34-201ENST00000437647 269 ntBASIC1.95□□□□□ -2.1
PCDH9Q9HC56 SNORD65B-201ENST00000459126 73 ntBASIC1.95□□□□□ -2.1
PCDH9Q9HC56 AC025465.3-201ENST00000510570 311 ntBASIC1.95□□□□□ -2.1
PCDH9Q9HC56 RNU6-496P-201ENST00000516145 99 ntBASIC1.95□□□□□ -2.1
PCDH9Q9HC56 RNU2-12P-201ENST00000517216 168 ntBASIC1.95□□□□□ -2.1
PCDH9Q9HC56 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.95□□□□□ -2.1
PCDH9Q9HC56 MIR3145-201ENST00000580727 82 ntBASIC1.95□□□□□ -2.1
PCDH9Q9HC56 MIR4503-201ENST00000582187 83 ntBASIC1.95□□□□□ -2.1
PCDH9Q9HC56 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.95□□□□□ -2.1
PCDH9Q9HC56 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.95□□□□□ -2.1
PCDH9Q9HC56 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
PCDH9Q9HC56 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
PCDH9Q9HC56 Y_RNA.16-201ENST00000362421 102 ntBASIC1.94□□□□□ -2.1
PCDH9Q9HC56 Y_RNA.483-201ENST00000384380 101 ntBASIC1.94□□□□□ -2.1
PCDH9Q9HC56 Y_RNA.541-201ENST00000384640 113 ntBASIC1.94□□□□□ -2.1
PCDH9Q9HC56 MIR597-201ENST00000384968 97 ntBASIC1.94□□□□□ -2.1
PCDH9Q9HC56 MT-TW-201ENST00000387382 68 ntBASIC1.94□□□□□ -2.1
PCDH9Q9HC56 AL355796.1-201ENST00000406706 323 ntBASIC1.94□□□□□ -2.1
PCDH9Q9HC56 AC008134.1-201ENST00000420943 193 ntBASIC1.94□□□□□ -2.1
PCDH9Q9HC56 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.94□□□□□ -2.1
PCDH9Q9HC56 AC096920.1-201ENST00000423991 241 ntBASIC1.94□□□□□ -2.1
PCDH9Q9HC56 HMGN2P19-201ENST00000425149 265 ntBASIC1.94□□□□□ -2.1
PCDH9Q9HC56 POLR2KP2-201ENST00000438155 177 ntBASIC1.94□□□□□ -2.1
PCDH9Q9HC56 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.94□□□□□ -2.1
PCDH9Q9HC56 HSPE1P25-201ENST00000455484 251 ntBASIC1.94□□□□□ -2.1
PCDH9Q9HC56 TRBVB-201ENST00000477100 408 ntBASIC1.94□□□□□ -2.1
PCDH9Q9HC56 AC011406.1-201ENST00000512440 370 ntBASIC1.94□□□□□ -2.1
PCDH9Q9HC56 RNA5SP137-201ENST00000516833 135 ntBASIC1.94□□□□□ -2.1
PCDH9Q9HC56 RNU6-856P-201ENST00000516959 98 ntBASIC1.94□□□□□ -2.1
PCDH9Q9HC56 SCARNA24.2-201ENST00000516968 130 ntBASIC1.94□□□□□ -2.1
PCDH9Q9HC56 AL161670.1-201ENST00000554348 137 ntBASIC1.94□□□□□ -2.1
PCDH9Q9HC56 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.94□□□□□ -2.1
PCDH9Q9HC56 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.94□□□□□ -2.1
PCDH9Q9HC56 AC008555.8-201ENST00000623602 2168 ntBASIC1.93□□□□□ -2.1
PCDH9Q9HC56 RNU4-90P-201ENST00000362773 141 ntBASIC1.93□□□□□ -2.1
PCDH9Q9HC56 SNORD81.1-201ENST00000363064 77 ntBASIC1.93□□□□□ -2.1
PCDH9Q9HC56 Y_RNA.329-201ENST00000365209 107 ntBASIC1.93□□□□□ -2.1
PCDH9Q9HC56 RNU6-407P-201ENST00000365280 104 ntBASIC1.93□□□□□ -2.1
PCDH9Q9HC56 Y_RNA.383-201ENST00000383855 97 ntBASIC1.93□□□□□ -2.1
PCDH9Q9HC56 SNORA20B-201ENST00000384220 132 ntBASIC1.93□□□□□ -2.1
PCDH9Q9HC56 RNU6-463P-201ENST00000384340 107 ntBASIC1.93□□□□□ -2.1
PCDH9Q9HC56 RNU6-417P-201ENST00000384712 107 ntBASIC1.93□□□□□ -2.1
PCDH9Q9HC56 MIR29C-201ENST00000385231 88 ntBASIC1.93□□□□□ -2.1
PCDH9Q9HC56 Y_RNA.581-201ENST00000391017 97 ntBASIC1.93□□□□□ -2.1
PCDH9Q9HC56 AC019129.1-201ENST00000403786 261 ntBASIC1.93□□□□□ -2.1
PCDH9Q9HC56 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.93□□□□□ -2.1
PCDH9Q9HC56 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.93□□□□□ -2.1
PCDH9Q9HC56 RNU6-436P-201ENST00000516171 114 ntBASIC1.93□□□□□ -2.1
PCDH9Q9HC56 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.93□□□□□ -2.1
PCDH9Q9HC56 AC023157.2-201ENST00000540596 141 ntBASIC1.93□□□□□ -2.1
PCDH9Q9HC56 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.93□□□□□ -2.1
PCDH9Q9HC56 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.93□□□□□ -2.1
PCDH9Q9HC56 7SK.10-201ENST00000621414 298 ntBASIC1.93□□□□□ -2.1
PCDH9Q9HC56 RNU1-58P-201ENST00000362413 163 ntBASIC1.92□□□□□ -2.1
PCDH9Q9HC56 SNORD115-30-201ENST00000364117 82 ntBASIC1.92□□□□□ -2.1
PCDH9Q9HC56 Y_RNA.243-201ENST00000364481 109 ntBASIC1.92□□□□□ -2.1
PCDH9Q9HC56 Y_RNA.569-201ENST00000384749 103 ntBASIC1.92□□□□□ -2.1
PCDH9Q9HC56 MIR518A2-201ENST00000384966 87 ntBASIC1.92□□□□□ -2.1
PCDH9Q9HC56 HMGN2P39-201ENST00000398005 273 ntBASIC1.92□□□□□ -2.1
PCDH9Q9HC56 AL031003.1-201ENST00000404229 172 ntBASIC1.92□□□□□ -2.1
PCDH9Q9HC56 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.92□□□□□ -2.1
PCDH9Q9HC56 AL121890.1-201ENST00000435457 205 ntBASIC1.92□□□□□ -2.1
PCDH9Q9HC56 MRPS10P1-201ENST00000448483 130 ntBASIC1.92□□□□□ -2.1
PCDH9Q9HC56 UBL5P3-201ENST00000475112 231 ntBASIC1.92□□□□□ -2.1
PCDH9Q9HC56 RPS27P22-201ENST00000478056 241 ntBASIC1.92□□□□□ -2.1
PCDH9Q9HC56 AC010598.1-201ENST00000510378 103 ntBASIC1.92□□□□□ -2.1
PCDH9Q9HC56 DEFB108E-201ENST00000524692 240 ntBASIC1.92□□□□□ -2.1
PCDH9Q9HC56 DEFB117-201ENST00000602356 141 ntBASIC1.92□□□□□ -2.1
PCDH9Q9HC56 U4.1-201ENST00000620349 87 ntBASIC1.92□□□□□ -2.1
PCDH9Q9HC56 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PCDH9Q9HC56 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
PCDH9Q9HC56 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
PCDH9Q9HC56 ZNF702P-202ENST00000434269 1966 ntBASIC1.91□□□□□ -2.1
PCDH9Q9HC56 AC010615.1-201ENST00000594254 1764 ntBASIC1.91□□□□□ -2.1
PCDH9Q9HC56 Y_RNA.124-201ENST00000363339 93 ntBASIC1.91□□□□□ -2.1
PCDH9Q9HC56 SNORA16.1-201ENST00000364597 132 ntBASIC1.91□□□□□ -2.1
PCDH9Q9HC56 RNU6-1203P-201ENST00000410703 110 ntBASIC1.91□□□□□ -2.1
PCDH9Q9HC56 HMGN2P3-201ENST00000433603 273 ntBASIC1.91□□□□□ -2.1
PCDH9Q9HC56 HMGN2P5-201ENST00000436882 273 ntBASIC1.91□□□□□ -2.1
PCDH9Q9HC56 ATP5J2P3-201ENST00000451550 258 ntBASIC1.91□□□□□ -2.1
PCDH9Q9HC56 RNU1-131P-201ENST00000458943 161 ntBASIC1.91□□□□□ -2.1
PCDH9Q9HC56 RPL23AP42-201ENST00000471152 471 ntBASIC1.91□□□□□ -2.1
PCDH9Q9HC56 YWHAEP4-201ENST00000505390 198 ntBASIC1.91□□□□□ -2.1
PCDH9Q9HC56 SUMO2P18-201ENST00000518873 252 ntBASIC1.91□□□□□ -2.1
PCDH9Q9HC56 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.91□□□□□ -2.1
PCDH9Q9HC56 MIR3169-201ENST00000578032 83 ntBASIC1.91□□□□□ -2.1
PCDH9Q9HC56 MIR3149-201ENST00000584629 83 ntBASIC1.91□□□□□ -2.1
PCDH9Q9HC56 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.91□□□□□ -2.1
PCDH9Q9HC56 U6.104-201ENST00000637979 90 ntBASIC1.91□□□□□ -2.1
PCDH9Q9HC56 RNA5SP276-201ENST00000362580 94 ntBASIC1.9□□□□□ -2.11
PCDH9Q9HC56 RNU6-862P-201ENST00000362804 105 ntBASIC1.9□□□□□ -2.11
PCDH9Q9HC56 Y_RNA.237-201ENST00000364439 102 ntBASIC1.9□□□□□ -2.11
PCDH9Q9HC56 RNU6-290P-201ENST00000365212 101 ntBASIC1.9□□□□□ -2.11
PCDH9Q9HC56 MIR1283-2-201ENST00000408621 87 ntBASIC1.9□□□□□ -2.11
PCDH9Q9HC56 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms