Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 Y_RNA.16-201ENST00000362421 102 ntBASIC1.93□□□□□ -2.1
UPF2Q9HAU5 Y_RNA.84-201ENST00000363011 104 ntBASIC1.93□□□□□ -2.1
UPF2Q9HAU5 SNORD113-8-201ENST00000363497 74 ntBASIC1.93□□□□□ -2.1
UPF2Q9HAU5 Y_RNA.149-201ENST00000363558 117 ntBASIC1.93□□□□□ -2.1
UPF2Q9HAU5 Y_RNA.361-201ENST00000365515 120 ntBASIC1.93□□□□□ -2.1
UPF2Q9HAU5 RNU6-463P-201ENST00000384340 107 ntBASIC1.93□□□□□ -2.1
UPF2Q9HAU5 SNORA40.18-201ENST00000391200 128 ntBASIC1.93□□□□□ -2.1
UPF2Q9HAU5 AL357139.1-201ENST00000407792 426 ntBASIC1.93□□□□□ -2.1
UPF2Q9HAU5 RNA5SP450-201ENST00000411206 102 ntBASIC1.93□□□□□ -2.1
UPF2Q9HAU5 AC245102.2-201ENST00000448956 180 ntBASIC1.93□□□□□ -2.1
UPF2Q9HAU5 RNU7-57P-201ENST00000459540 60 ntBASIC1.93□□□□□ -2.1
UPF2Q9HAU5 Y_RNA.668-201ENST00000516233 93 ntBASIC1.93□□□□□ -2.1
UPF2Q9HAU5 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.93□□□□□ -2.1
UPF2Q9HAU5 AC005176.2-201ENST00000596933 147 ntBASIC1.93□□□□□ -2.1
UPF2Q9HAU5 MIR502-201ENST00000606349 86 ntBASIC1.93□□□□□ -2.1
UPF2Q9HAU5 MIR6715A-201ENST00000615929 79 ntBASIC1.93□□□□□ -2.1
UPF2Q9HAU5 AC022513.1-201ENST00000624512 117 ntBASIC1.93□□□□□ -2.1
UPF2Q9HAU5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.93□□□□□ -2.1
UPF2Q9HAU5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.92□□□□□ -2.1
UPF2Q9HAU5 Y_RNA.176-201ENST00000363815 109 ntBASIC1.92□□□□□ -2.1
UPF2Q9HAU5 Y_RNA.230-201ENST00000364348 109 ntBASIC1.92□□□□□ -2.1
UPF2Q9HAU5 RNU6-505P-201ENST00000384427 107 ntBASIC1.92□□□□□ -2.1
UPF2Q9HAU5 RNU6-1026P-201ENST00000384465 108 ntBASIC1.92□□□□□ -2.1
UPF2Q9HAU5 AC139712.2-201ENST00000424302 339 ntBASIC1.92□□□□□ -2.1
UPF2Q9HAU5 HMGN2P3-201ENST00000433603 273 ntBASIC1.92□□□□□ -2.1
UPF2Q9HAU5 HMGN2P5-201ENST00000436882 273 ntBASIC1.92□□□□□ -2.1
UPF2Q9HAU5 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.92□□□□□ -2.1
UPF2Q9HAU5 RNU6-221P-201ENST00000459541 99 ntBASIC1.92□□□□□ -2.1
UPF2Q9HAU5 RNU6-107P-201ENST00000516643 102 ntBASIC1.92□□□□□ -2.1
UPF2Q9HAU5 SNORA40.15-201ENST00000516884 107 ntBASIC1.92□□□□□ -2.1
UPF2Q9HAU5 Y_RNA.713-201ENST00000517013 96 ntBASIC1.92□□□□□ -2.1
UPF2Q9HAU5 RNU6-570P-201ENST00000517051 105 ntBASIC1.92□□□□□ -2.1
UPF2Q9HAU5 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.92□□□□□ -2.1
UPF2Q9HAU5 AC005828.6-201ENST00000606610 232 ntBASIC1.92□□□□□ -2.1
UPF2Q9HAU5 7SK.10-201ENST00000621414 298 ntBASIC1.92□□□□□ -2.1
UPF2Q9HAU5 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
UPF2Q9HAU5 Y_RNA.152-201ENST00000363578 100 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 SNORD115-30-201ENST00000364117 82 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 RNU6-1235P-201ENST00000384559 107 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 MIR29C-201ENST00000385231 88 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 AL355796.1-201ENST00000406706 323 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 MIR1289-2-201ENST00000408360 111 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 Y_RNA.602-201ENST00000410535 92 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 RNU6-1203P-201ENST00000410703 110 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 RNU6-57P-201ENST00000411348 103 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 SRIP3-201ENST00000413200 219 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 AC060773.1-201ENST00000421698 310 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.91□□□□□ -2.1
UPF2Q9HAU5 AC096920.1-201ENST00000423991 241 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 TOMM22P2-201ENST00000430735 237 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 AL353689.1-201ENST00000438895 199 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 RNU6-498P-201ENST00000459468 107 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.91□□□□□ -2.1
UPF2Q9HAU5 MTND1P19-201ENST00000511780 315 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 RNU6-856P-201ENST00000516959 98 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 MIR4753-201ENST00000585119 83 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 AL590240.4-201ENST00000616908 390 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 snoZ196.1-201ENST00000625269 89 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 U6.115-201ENST00000636045 103 ntBASIC1.91□□□□□ -2.1
UPF2Q9HAU5 Y_RNA.243-201ENST00000364481 109 ntBASIC1.9□□□□□ -2.11
UPF2Q9HAU5 RNU6-438P-201ENST00000365561 103 ntBASIC1.9□□□□□ -2.11
UPF2Q9HAU5 Y_RNA.418-201ENST00000384029 102 ntBASIC1.9□□□□□ -2.11
UPF2Q9HAU5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
UPF2Q9HAU5 RNU2-54P-201ENST00000410299 190 ntBASIC1.9□□□□□ -2.11
UPF2Q9HAU5 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.9□□□□□ -2.11
UPF2Q9HAU5 BX510359.4-201ENST00000423750 193 ntBASIC1.9□□□□□ -2.11
UPF2Q9HAU5 AL357134.1-201ENST00000445848 426 ntBASIC1.9□□□□□ -2.11
UPF2Q9HAU5 RPL23AP63-201ENST00000498752 471 ntBASIC1.9□□□□□ -2.11
UPF2Q9HAU5 AC025647.1-201ENST00000517879 253 ntBASIC1.9□□□□□ -2.11
UPF2Q9HAU5 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.9□□□□□ -2.11
UPF2Q9HAU5 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.9□□□□□ -2.11
UPF2Q9HAU5 MIR3169-201ENST00000578032 83 ntBASIC1.9□□□□□ -2.11
UPF2Q9HAU5 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
UPF2Q9HAU5 Y_RNA.99-201ENST00000363138 105 ntBASIC1.89□□□□□ -2.11
UPF2Q9HAU5 Y_RNA.452-201ENST00000384202 108 ntBASIC1.89□□□□□ -2.11
UPF2Q9HAU5 Y_RNA.461-201ENST00000384263 103 ntBASIC1.89□□□□□ -2.11
UPF2Q9HAU5 RNU6-196P-201ENST00000384315 107 ntBASIC1.89□□□□□ -2.11
UPF2Q9HAU5 MIR320A-201ENST00000385302 82 ntBASIC1.89□□□□□ -2.11
UPF2Q9HAU5 MIR1283-2-201ENST00000408621 87 ntBASIC1.89□□□□□ -2.11
UPF2Q9HAU5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.89□□□□□ -2.11
UPF2Q9HAU5 AL135790.2-201ENST00000437701 267 ntBASIC1.89□□□□□ -2.11
UPF2Q9HAU5 Y_RNA.680-201ENST00000516441 93 ntBASIC1.89□□□□□ -2.11
UPF2Q9HAU5 RNU6-250P-201ENST00000516958 103 ntBASIC1.89□□□□□ -2.11
UPF2Q9HAU5 AC023157.2-201ENST00000540596 141 ntBASIC1.89□□□□□ -2.11
UPF2Q9HAU5 BX248123.2-201ENST00000606318 124 ntBASIC1.89□□□□□ -2.11
UPF2Q9HAU5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.89□□□□□ -2.11
UPF2Q9HAU5 AC010615.1-201ENST00000594254 1764 ntBASIC1.88□□□□□ -2.11
UPF2Q9HAU5 Y_RNA.124-201ENST00000363339 93 ntBASIC1.88□□□□□ -2.11
UPF2Q9HAU5 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
UPF2Q9HAU5 RNU5A-5P-201ENST00000411054 116 ntBASIC1.88□□□□□ -2.11
UPF2Q9HAU5 RPL23AP6-201ENST00000446637 472 ntBASIC1.88□□□□□ -2.11
UPF2Q9HAU5 MRPS10P1-201ENST00000448483 130 ntBASIC1.88□□□□□ -2.11
UPF2Q9HAU5 RNU6-436P-201ENST00000516171 114 ntBASIC1.88□□□□□ -2.11
UPF2Q9HAU5 RNU7-110P-201ENST00000516891 62 ntBASIC1.88□□□□□ -2.11
UPF2Q9HAU5 MIR4299-201ENST00000577899 72 ntBASIC1.88□□□□□ -2.11
UPF2Q9HAU5 MIR3145-201ENST00000580727 82 ntBASIC1.88□□□□□ -2.11
UPF2Q9HAU5 MIR3149-201ENST00000584629 83 ntBASIC1.88□□□□□ -2.11
UPF2Q9HAU5 AC011373.1-201ENST00000607270 237 ntBASIC1.88□□□□□ -2.11
UPF2Q9HAU5 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.88□□□□□ -2.11
UPF2Q9HAU5 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms