Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 Y_RNA.80-201ENST00000362996 102 ntBASIC1.38□□□□□ -2.19
VIPAS39Q9H9C1 Y_RNA.267-201ENST00000364679 109 ntBASIC1.38□□□□□ -2.19
VIPAS39Q9H9C1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.38□□□□□ -2.19
VIPAS39Q9H9C1 Y_RNA.485-201ENST00000384395 102 ntBASIC1.38□□□□□ -2.19
VIPAS39Q9H9C1 Y_RNA.496-201ENST00000384444 101 ntBASIC1.38□□□□□ -2.19
VIPAS39Q9H9C1 MRPL42P3-201ENST00000401492 326 ntBASIC1.38□□□□□ -2.19
VIPAS39Q9H9C1 AF228730.4-201ENST00000421457 183 ntBASIC1.38□□□□□ -2.19
VIPAS39Q9H9C1 SDAD1P3-201ENST00000427380 333 ntBASIC1.38□□□□□ -2.19
VIPAS39Q9H9C1 FCF1P4-201ENST00000448326 183 ntBASIC1.38□□□□□ -2.19
VIPAS39Q9H9C1 RNU7-152P-201ENST00000458982 64 ntBASIC1.38□□□□□ -2.19
VIPAS39Q9H9C1 AC099513.1-201ENST00000490423 301 ntBASIC1.38□□□□□ -2.19
VIPAS39Q9H9C1 RNU6-548P-201ENST00000517083 115 ntBASIC1.38□□□□□ -2.19
VIPAS39Q9H9C1 SUMO2P16-201ENST00000519475 264 ntBASIC1.38□□□□□ -2.19
VIPAS39Q9H9C1 AC092447.9-201ENST00000603395 144 ntBASIC1.38□□□□□ -2.19
VIPAS39Q9H9C1 AL161722.3-201ENST00000605789 2983 ntBASIC1.38□□□□□ -2.19
VIPAS39Q9H9C1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 AC018630.2-201ENST00000534866 2403 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 MIR410-201ENST00000362222 80 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 RNU6-1115P-201ENST00000362490 106 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 Y_RNA.101-201ENST00000363154 102 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 RNU6-626P-201ENST00000363354 107 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 Y_RNA.315-201ENST00000365117 102 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 RNA5SP259-201ENST00000365541 109 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 RNU6-20P-201ENST00000384106 107 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 RNU6-1310P-201ENST00000384153 107 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 RNY3P4-201ENST00000384428 101 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 RNU6-376P-201ENST00000384731 106 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 RNU6-1031P-201ENST00000384773 107 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 MIR194-1-201ENST00000384892 85 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 MRPL35P1-201ENST00000404272 572 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 AC004965.1-201ENST00000413033 213 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 AL161935.2-201ENST00000414627 60 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 RPS29P29-201ENST00000456396 171 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 AC091021.1-201ENST00000468051 388 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 SNORA31.24-201ENST00000517232 57 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 RPL21P9-201ENST00000556149 474 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 MIR3683-201ENST00000580847 82 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 AC006435.5-201ENST00000624486 112 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 MIR6079-201ENST00000635807 62 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 U6.92-201ENST00000636464 89 ntBASIC1.37□□□□□ -2.19
VIPAS39Q9H9C1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
VIPAS39Q9H9C1 RNU4-79P-201ENST00000362764 141 ntBASIC1.36□□□□□ -2.19
VIPAS39Q9H9C1 Y_RNA.419-201ENST00000384041 102 ntBASIC1.36□□□□□ -2.19
VIPAS39Q9H9C1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.36□□□□□ -2.19
VIPAS39Q9H9C1 SNORD78.2-201ENST00000391076 69 ntBASIC1.36□□□□□ -2.19
VIPAS39Q9H9C1 AL627390.1-201ENST00000396055 340 ntBASIC1.36□□□□□ -2.19
VIPAS39Q9H9C1 RN7SKP200-201ENST00000410564 320 ntBASIC1.36□□□□□ -2.19
VIPAS39Q9H9C1 MTCO3P19-201ENST00000415864 321 ntBASIC1.36□□□□□ -2.19
VIPAS39Q9H9C1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.36□□□□□ -2.19
VIPAS39Q9H9C1 STAG3L5P-204ENST00000443759 179 ntBASIC1.36□□□□□ -2.19
VIPAS39Q9H9C1 RPS26P55-201ENST00000471178 356 ntBASIC1.36□□□□□ -2.19
VIPAS39Q9H9C1 AC079140.2-201ENST00000506193 142 ntBASIC1.36□□□□□ -2.19
VIPAS39Q9H9C1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.36□□□□□ -2.19
VIPAS39Q9H9C1 RNU6-1291P-201ENST00000516591 104 ntBASIC1.36□□□□□ -2.19
VIPAS39Q9H9C1 RNU6-1012P-201ENST00000516606 109 ntBASIC1.36□□□□□ -2.19
VIPAS39Q9H9C1 RAB11AP2-201ENST00000545905 639 ntBASIC1.36□□□□□ -2.19
VIPAS39Q9H9C1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.36□□□□□ -2.19
VIPAS39Q9H9C1 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
VIPAS39Q9H9C1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 Y_RNA.5-201ENST00000362334 102 ntBASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 RNU4-13P-201ENST00000364019 141 ntBASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 MIR513A1-201ENST00000385138 129 ntBASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 SNORA12.1-201ENST00000390873 148 ntBASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 RNU1-78P-201ENST00000391248 165 ntBASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 MTND1P14-201ENST00000427400 950 ntBASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 AL591806.2-201ENST00000433122 173 ntBASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 AL135790.2-201ENST00000437701 267 ntBASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 RNU6-966P-201ENST00000516479 104 ntBASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 AC015688.6-201ENST00000577737 104 ntBASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 MIR3937-201ENST00000580135 106 ntBASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 VN1R91P-201ENST00000594377 169 ntBASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 AC005176.2-201ENST00000596933 147 ntBASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 AL390123.1-201ENST00000603216 237 ntBASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 AL133255.1-201ENST00000606374 441 ntBASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 AL365434.2-201ENST00000607979 234 ntBASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 AC240442.1-201ENST00000616055 283 ntBASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 AC127459.3-201ENST00000624328 466 ntBASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 MIR4272-201ENST00000635924 64 ntBASIC1.35□□□□□ -2.19
VIPAS39Q9H9C1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
VIPAS39Q9H9C1 MIR302D-201ENST00000362275 68 ntBASIC1.34□□□□□ -2.19
VIPAS39Q9H9C1 RNU6-324P-201ENST00000363957 106 ntBASIC1.34□□□□□ -2.19
VIPAS39Q9H9C1 Y_RNA.243-201ENST00000364481 109 ntBASIC1.34□□□□□ -2.19
VIPAS39Q9H9C1 RNU6-950P-201ENST00000384651 107 ntBASIC1.34□□□□□ -2.19
VIPAS39Q9H9C1 MIR873-201ENST00000401120 77 ntBASIC1.34□□□□□ -2.19
VIPAS39Q9H9C1 RPEP5-201ENST00000441137 268 ntBASIC1.34□□□□□ -2.19
VIPAS39Q9H9C1 AL137792.2-201ENST00000443484 235 ntBASIC1.34□□□□□ -2.19
VIPAS39Q9H9C1 AC233266.1-201ENST00000454518 96 ntBASIC1.34□□□□□ -2.19
VIPAS39Q9H9C1 RNU7-94P-201ENST00000459576 63 ntBASIC1.34□□□□□ -2.19
VIPAS39Q9H9C1 RNU2-12P-201ENST00000517216 168 ntBASIC1.34□□□□□ -2.19
VIPAS39Q9H9C1 AC090821.2-201ENST00000523552 176 ntBASIC1.34□□□□□ -2.19
VIPAS39Q9H9C1 MIR4422-201ENST00000581938 83 ntBASIC1.34□□□□□ -2.19
VIPAS39Q9H9C1 PRR13P7-201ENST00000605538 430 ntBASIC1.34□□□□□ -2.19
VIPAS39Q9H9C1 AC006157.1-201ENST00000611750 366 ntBASIC1.34□□□□□ -2.19
VIPAS39Q9H9C1 AC242852.1-201ENST00000612151 96 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 234.6 ms