Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
EBF3Q9H4W6 AC010329.5-201ENST00000623497 2174 ntBASIC2.37□□□□□ -2.03
EBF3Q9H4W6 RNU6-959P-201ENST00000384671 107 ntBASIC2.37□□□□□ -2.03
EBF3Q9H4W6 Y_RNA.568-201ENST00000384742 113 ntBASIC2.37□□□□□ -2.03
EBF3Q9H4W6 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.37□□□□□ -2.03
EBF3Q9H4W6 RPS15AP28-201ENST00000435088 386 ntBASIC2.37□□□□□ -2.03
EBF3Q9H4W6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.37□□□□□ -2.03
EBF3Q9H4W6 RNU6-237P-201ENST00000515985 71 ntBASIC2.37□□□□□ -2.03
EBF3Q9H4W6 SNORD116-25-201ENST00000516517 92 ntBASIC2.37□□□□□ -2.03
EBF3Q9H4W6 AC100767.1-201ENST00000528178 123 ntBASIC2.37□□□□□ -2.03
EBF3Q9H4W6 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.37□□□□□ -2.03
EBF3Q9H4W6 MIR5007-201ENST00000583098 95 ntBASIC2.37□□□□□ -2.03
EBF3Q9H4W6 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.37□□□□□ -2.03
EBF3Q9H4W6 MIR4769-201ENST00000584126 77 ntBASIC2.37□□□□□ -2.03
EBF3Q9H4W6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.37□□□□□ -2.03
EBF3Q9H4W6 AC067747.1-201ENST00000608026 250 ntBASIC2.37□□□□□ -2.03
EBF3Q9H4W6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
EBF3Q9H4W6 Y_RNA.75-201ENST00000362927 97 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 RNU6-1290P-201ENST00000362957 109 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 U3.9-201ENST00000363823 204 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 Y_RNA.182-201ENST00000363880 111 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 RNU6-1048P-201ENST00000364054 107 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 SNORD115-30-201ENST00000364117 82 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 RNU4-84P-201ENST00000364200 139 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 RNU4-10P-201ENST00000364383 140 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 Y_RNA.400-201ENST00000383963 111 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 RNU6-22P-201ENST00000384355 107 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 Y_RNA.497-201ENST00000384447 98 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 RNU6-1081P-201ENST00000384537 107 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 Y_RNA.572-201ENST00000384757 98 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 RNU6-381P-201ENST00000391259 108 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 MIR320B2-201ENST00000408479 138 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.36□□□□□ -2.03
EBF3Q9H4W6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
EBF3Q9H4W6 AC003685.2-201ENST00000422795 395 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 AL162725.1-201ENST00000435405 301 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.36□□□□□ -2.03
EBF3Q9H4W6 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.36□□□□□ -2.03
EBF3Q9H4W6 AC145146.1-201ENST00000496370 254 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 RNU1-104P-201ENST00000517280 175 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 SNRPGP20-201ENST00000604477 205 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.36□□□□□ -2.03
EBF3Q9H4W6 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.36□□□□□ -2.03
EBF3Q9H4W6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.35□□□□□ -2.03
EBF3Q9H4W6 AC007336.1-201ENST00000576365 3828 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 Z82209.1-201ENST00000422141 2135 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
EBF3Q9H4W6 MIR21-201ENST00000362134 72 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 Y_RNA.23-201ENST00000362496 106 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 Y_RNA.215-201ENST00000364204 112 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 snoU2_19.4-201ENST00000364329 80 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 RNU4-17P-201ENST00000365598 141 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 RNU6-1264P-201ENST00000383891 107 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 RNU6-449P-201ENST00000383914 107 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 RNU6-1310P-201ENST00000384153 107 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 RNU6-1117P-201ENST00000384525 104 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 Y_RNA.586-201ENST00000391146 98 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 RNA5SP475-201ENST00000410568 110 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 RNU6-735P-201ENST00000410612 107 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 RNU2-51P-201ENST00000410708 197 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 AC027124.2-201ENST00000428249 105 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 HMGN2P3-201ENST00000433603 273 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 HMGN2P5-201ENST00000436882 273 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 AC004386.2-201ENST00000441858 148 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.35□□□□□ -2.03
EBF3Q9H4W6 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
EBF3Q9H4W6 RNU6-426P-201ENST00000516464 97 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 AC090616.3-201ENST00000582184 217 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 AL365222.1-201ENST00000614661 98 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 MTND1P7-201ENST00000632801 297 ntBASIC2.35□□□□□ -2.03
EBF3Q9H4W6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
EBF3Q9H4W6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.34□□□□□ -2.03
EBF3Q9H4W6 SNORD114-1-201ENST00000362705 72 ntBASIC2.34□□□□□ -2.03
EBF3Q9H4W6 Y_RNA.121-201ENST00000363309 113 ntBASIC2.34□□□□□ -2.03
EBF3Q9H4W6 RNU6-461P-201ENST00000364195 107 ntBASIC2.34□□□□□ -2.03
EBF3Q9H4W6 RNU6-312P-201ENST00000364629 107 ntBASIC2.34□□□□□ -2.03
EBF3Q9H4W6 SNORA18.2-201ENST00000383865 132 ntBASIC2.34□□□□□ -2.03
EBF3Q9H4W6 SNORA67.2-201ENST00000384300 149 ntBASIC2.34□□□□□ -2.03
EBF3Q9H4W6 Y_RNA.488-201ENST00000384403 102 ntBASIC2.34□□□□□ -2.03
EBF3Q9H4W6 SNORA22C-201ENST00000384614 134 ntBASIC2.34□□□□□ -2.03
EBF3Q9H4W6 MIR221-201ENST00000385135 110 ntBASIC2.34□□□□□ -2.03
EBF3Q9H4W6 MIR569-201ENST00000385228 96 ntBASIC2.34□□□□□ -2.03
EBF3Q9H4W6 AC018634.1-201ENST00000437554 401 ntBASIC2.34□□□□□ -2.03
EBF3Q9H4W6 SCARNA8-201ENST00000515924 131 ntBASIC2.34□□□□□ -2.03
EBF3Q9H4W6 RNU6-107P-201ENST00000516643 102 ntBASIC2.34□□□□□ -2.03
EBF3Q9H4W6 MIR3616-201ENST00000584070 92 ntBASIC2.34□□□□□ -2.03
EBF3Q9H4W6 RPL30P11-203ENST00000598995 310 ntBASIC2.34□□□□□ -2.03
EBF3Q9H4W6 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.34□□□□□ -2.03
EBF3Q9H4W6 MIR7157-201ENST00000635801 60 ntBASIC2.34□□□□□ -2.03
EBF3Q9H4W6 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
EBF3Q9H4W6 AC100821.1-201ENST00000523153 2479 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.33□□□□□ -2.04
EBF3Q9H4W6 AC134026.1-201ENST00000623249 2239 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 snoU2_19.1-201ENST00000362361 80 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 RNU6-324P-201ENST00000363957 106 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 RNU6-151P-201ENST00000364158 107 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 RNU6-275P-201ENST00000364910 107 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 SNORA64-201ENST00000384674 134 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 MIR144-201ENST00000384886 86 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms