Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC005336.3-201ENST00000623833 2679 ntBASIC2.22□□□□□ -2.05
CDT1Q9H211 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.22□□□□□ -2.05
CDT1Q9H211 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.22□□□□□ -2.05
CDT1Q9H211 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CDT1Q9H211 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CDT1Q9H211 Y_RNA.44-201ENST00000362676 108 ntBASIC2.21□□□□□ -2.06
CDT1Q9H211 SNORA6-201ENST00000384033 151 ntBASIC2.21□□□□□ -2.06
CDT1Q9H211 RNU1-148P-201ENST00000384472 162 ntBASIC2.21□□□□□ -2.06
CDT1Q9H211 MIR300-201ENST00000401138 83 ntBASIC2.21□□□□□ -2.06
CDT1Q9H211 SNORD23.1-201ENST00000408212 104 ntBASIC2.21□□□□□ -2.06
CDT1Q9H211 HMGN2P9-201ENST00000476875 229 ntBASIC2.21□□□□□ -2.06
CDT1Q9H211 RNU6-107P-201ENST00000516643 102 ntBASIC2.21□□□□□ -2.06
CDT1Q9H211 CYCSP23-201ENST00000519781 313 ntBASIC2.21□□□□□ -2.06
CDT1Q9H211 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.21□□□□□ -2.06
CDT1Q9H211 DEFB117-201ENST00000602356 141 ntBASIC2.21□□□□□ -2.06
CDT1Q9H211 BX284668.6-201ENST00000606899 438 ntBASIC2.21□□□□□ -2.06
CDT1Q9H211 MIR3674-201ENST00000636576 68 ntBASIC2.21□□□□□ -2.06
CDT1Q9H211 AC068700.1-201ENST00000565862 3754 ntBASIC2.21□□□□□ -2.06
CDT1Q9H211 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CDT1Q9H211 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.2□□□□□ -2.06
CDT1Q9H211 MIR410-201ENST00000362222 80 ntBASIC2.2□□□□□ -2.06
CDT1Q9H211 RNU4-80P-201ENST00000363200 141 ntBASIC2.2□□□□□ -2.06
CDT1Q9H211 Y_RNA.515-201ENST00000384535 112 ntBASIC2.2□□□□□ -2.06
CDT1Q9H211 MIR586-201ENST00000385035 97 ntBASIC2.2□□□□□ -2.06
CDT1Q9H211 MIR764-201ENST00000390811 85 ntBASIC2.2□□□□□ -2.06
CDT1Q9H211 AL137159.1-201ENST00000452808 512 ntBASIC2.2□□□□□ -2.06
CDT1Q9H211 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.2□□□□□ -2.06
CDT1Q9H211 AC016925.1-201ENST00000458303 298 ntBASIC2.2□□□□□ -2.06
CDT1Q9H211 RNU6-436P-201ENST00000516171 114 ntBASIC2.2□□□□□ -2.06
CDT1Q9H211 RNU2-12P-201ENST00000517216 168 ntBASIC2.2□□□□□ -2.06
CDT1Q9H211 MIR3126-201ENST00000577443 74 ntBASIC2.2□□□□□ -2.06
CDT1Q9H211 MIR4753-201ENST00000585119 83 ntBASIC2.2□□□□□ -2.06
CDT1Q9H211 AC008873.1-201ENST00000625051 138 ntBASIC2.2□□□□□ -2.06
CDT1Q9H211 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDT1Q9H211 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CDT1Q9H211 Y_RNA.136-201ENST00000363444 102 ntBASIC2.19□□□□□ -2.06
CDT1Q9H211 Y_RNA.297-201ENST00000364950 91 ntBASIC2.19□□□□□ -2.06
CDT1Q9H211 Y_RNA.329-201ENST00000365209 107 ntBASIC2.19□□□□□ -2.06
CDT1Q9H211 Y_RNA.332-201ENST00000365271 113 ntBASIC2.19□□□□□ -2.06
CDT1Q9H211 RNY4P28-201ENST00000365281 93 ntBASIC2.19□□□□□ -2.06
CDT1Q9H211 MIR1262-201ENST00000408276 93 ntBASIC2.19□□□□□ -2.06
CDT1Q9H211 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.19□□□□□ -2.06
CDT1Q9H211 RNU2-54P-201ENST00000410299 190 ntBASIC2.19□□□□□ -2.06
CDT1Q9H211 RNA5SP270-201ENST00000411361 118 ntBASIC2.19□□□□□ -2.06
CDT1Q9H211 RPL23AP36-201ENST00000413895 458 ntBASIC2.19□□□□□ -2.06
CDT1Q9H211 HMGN2P3-201ENST00000433603 273 ntBASIC2.19□□□□□ -2.06
CDT1Q9H211 HMGN2P5-201ENST00000436882 273 ntBASIC2.19□□□□□ -2.06
CDT1Q9H211 AL135790.2-201ENST00000437701 267 ntBASIC2.19□□□□□ -2.06
CDT1Q9H211 AC016717.1-201ENST00000448918 286 ntBASIC2.19□□□□□ -2.06
CDT1Q9H211 RNU6-191P-201ENST00000516295 94 ntBASIC2.19□□□□□ -2.06
CDT1Q9H211 RNY3P16-201ENST00000516338 101 ntBASIC2.19□□□□□ -2.06
CDT1Q9H211 RNU6-155P-201ENST00000516347 100 ntBASIC2.19□□□□□ -2.06
CDT1Q9H211 SNORA27.4-201ENST00000516650 95 ntBASIC2.19□□□□□ -2.06
CDT1Q9H211 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.19□□□□□ -2.06
CDT1Q9H211 MIR5694-201ENST00000581190 76 ntBASIC2.19□□□□□ -2.06
CDT1Q9H211 AC005828.6-201ENST00000606610 232 ntBASIC2.19□□□□□ -2.06
CDT1Q9H211 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CDT1Q9H211 Y_RNA.275-201ENST00000364726 110 ntBASIC2.18□□□□□ -2.06
CDT1Q9H211 RNA5SP160-201ENST00000364866 120 ntBASIC2.18□□□□□ -2.06
CDT1Q9H211 SNORA72.2-201ENST00000365028 127 ntBASIC2.18□□□□□ -2.06
CDT1Q9H211 RNU6-418P-201ENST00000384035 107 ntBASIC2.18□□□□□ -2.06
CDT1Q9H211 RNU6-1289P-201ENST00000384431 106 ntBASIC2.18□□□□□ -2.06
CDT1Q9H211 MIR144-201ENST00000384886 86 ntBASIC2.18□□□□□ -2.06
CDT1Q9H211 U3.40-201ENST00000408706 208 ntBASIC2.18□□□□□ -2.06
CDT1Q9H211 MIR1298-201ENST00000408783 112 ntBASIC2.18□□□□□ -2.06
CDT1Q9H211 RNA5SP475-201ENST00000410568 110 ntBASIC2.18□□□□□ -2.06
CDT1Q9H211 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.18□□□□□ -2.06
CDT1Q9H211 AC123900.1-201ENST00000420390 96 ntBASIC2.18□□□□□ -2.06
CDT1Q9H211 POLR2KP2-201ENST00000438155 177 ntBASIC2.18□□□□□ -2.06
CDT1Q9H211 AC005042.3-201ENST00000453230 174 ntBASIC2.18□□□□□ -2.06
CDT1Q9H211 MIR5089-201ENST00000580047 84 ntBASIC2.18□□□□□ -2.06
CDT1Q9H211 AL353997.5-201ENST00000618886 171 ntBASIC2.18□□□□□ -2.06
CDT1Q9H211 ZNF355P-201ENST00000427301 3216 ntBASIC2.18□□□□□ -2.06
CDT1Q9H211 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
CDT1Q9H211 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.17□□□□□ -2.06
CDT1Q9H211 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDT1Q9H211 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDT1Q9H211 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CDT1Q9H211 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDT1Q9H211 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
CDT1Q9H211 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CDT1Q9H211 U3.8-201ENST00000363675 217 ntBASIC2.17□□□□□ -2.06
CDT1Q9H211 Y_RNA.292-201ENST00000364904 97 ntBASIC2.17□□□□□ -2.06
CDT1Q9H211 RNU6-47P-201ENST00000383866 107 ntBASIC2.17□□□□□ -2.06
CDT1Q9H211 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.17□□□□□ -2.06
CDT1Q9H211 SNORA53-201ENST00000391141 249 ntBASIC2.17□□□□□ -2.06
CDT1Q9H211 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.17□□□□□ -2.06
CDT1Q9H211 Y_RNA.626-201ENST00000411288 95 ntBASIC2.17□□□□□ -2.06
CDT1Q9H211 SRIP3-201ENST00000413200 219 ntBASIC2.17□□□□□ -2.06
CDT1Q9H211 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.17□□□□□ -2.06
CDT1Q9H211 RNU7-57P-201ENST00000459540 60 ntBASIC2.17□□□□□ -2.06
CDT1Q9H211 AC107393.1-201ENST00000512403 346 ntBASIC2.17□□□□□ -2.06
CDT1Q9H211 RNU4-71P-201ENST00000516258 113 ntBASIC2.17□□□□□ -2.06
CDT1Q9H211 RNU7-193P-201ENST00000516723 65 ntBASIC2.17□□□□□ -2.06
CDT1Q9H211 IGLV3-17-201ENST00000519099 244 ntBASIC2.17□□□□□ -2.06
CDT1Q9H211 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.17□□□□□ -2.06
CDT1Q9H211 AC022559.1-201ENST00000520905 205 ntBASIC2.17□□□□□ -2.06
CDT1Q9H211 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.17□□□□□ -2.06
CDT1Q9H211 AC121758.2-201ENST00000553271 193 ntBASIC2.17□□□□□ -2.06
CDT1Q9H211 MIR4282-201ENST00000583613 67 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms