Protein–RNA interactions for Protein: Q9H0W5

CCDC8, Coiled-coil domain-containing protein 8, humanhuman

Predicted RBP Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8Q9H0W5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC8Q9H0W5 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC8Q9H0W5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC8Q9H0W5 Y_RNA.144-201ENST00000363521 113 ntBASIC2.55□□□□□ -2
CCDC8Q9H0W5 RNU6-324P-201ENST00000363957 106 ntBASIC2.55□□□□□ -2
CCDC8Q9H0W5 Y_RNA.376-201ENST00000365638 108 ntBASIC2.55□□□□□ -2
CCDC8Q9H0W5 RNU2-2P-201ENST00000410396 191 ntBASIC2.55□□□□□ -2
CCDC8Q9H0W5 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.55□□□□□ -2
CCDC8Q9H0W5 HMGN2P3-201ENST00000433603 273 ntBASIC2.55□□□□□ -2
CCDC8Q9H0W5 HMGN2P5-201ENST00000436882 273 ntBASIC2.55□□□□□ -2
CCDC8Q9H0W5 MRPS10P1-201ENST00000448483 130 ntBASIC2.55□□□□□ -2
CCDC8Q9H0W5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.55□□□□□ -2
CCDC8Q9H0W5 AC098869.1-201ENST00000481627 292 ntBASIC2.55□□□□□ -2
CCDC8Q9H0W5 RNA5SP20-201ENST00000515976 84 ntBASIC2.55□□□□□ -2
CCDC8Q9H0W5 RNU2-31P-201ENST00000516954 155 ntBASIC2.55□□□□□ -2
CCDC8Q9H0W5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.55□□□□□ -2
CCDC8Q9H0W5 AC007229.1-201ENST00000590455 412 ntBASIC2.55□□□□□ -2
CCDC8Q9H0W5 AL359075.3-201ENST00000613288 217 ntBASIC2.55□□□□□ -2
CCDC8Q9H0W5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.55□□□□□ -2
CCDC8Q9H0W5 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.55□□□□□ -2
CCDC8Q9H0W5 7SK.10-201ENST00000621414 298 ntBASIC2.55□□□□□ -2
CCDC8Q9H0W5 MIR219B-201ENST00000637023 88 ntBASIC2.55□□□□□ -2
CCDC8Q9H0W5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC8Q9H0W5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC8Q9H0W5 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC8Q9H0W5 Y_RNA.26-201ENST00000362539 101 ntBASIC2.54□□□□□ -2
CCDC8Q9H0W5 Y_RNA.287-201ENST00000364853 94 ntBASIC2.54□□□□□ -2
CCDC8Q9H0W5 SNORA48.1-201ENST00000390879 135 ntBASIC2.54□□□□□ -2
CCDC8Q9H0W5 RPS26P55-201ENST00000471178 356 ntBASIC2.54□□□□□ -2
CCDC8Q9H0W5 HMGN1P10-201ENST00000474557 553 ntBASIC2.54□□□□□ -2
CCDC8Q9H0W5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.54□□□□□ -2
CCDC8Q9H0W5 RNU7-99P-201ENST00000516271 62 ntBASIC2.54□□□□□ -2
CCDC8Q9H0W5 SNORA31.15-201ENST00000516771 132 ntBASIC2.54□□□□□ -2
CCDC8Q9H0W5 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.54□□□□□ -2
CCDC8Q9H0W5 MIR4438-201ENST00000585271 93 ntBASIC2.54□□□□□ -2
CCDC8Q9H0W5 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.53□□□□□ -2
CCDC8Q9H0W5 SNORD114-1-201ENST00000362705 72 ntBASIC2.53□□□□□ -2
CCDC8Q9H0W5 Y_RNA.286-201ENST00000364813 102 ntBASIC2.53□□□□□ -2
CCDC8Q9H0W5 Y_RNA.329-201ENST00000365209 107 ntBASIC2.53□□□□□ -2
CCDC8Q9H0W5 Y_RNA.452-201ENST00000384202 108 ntBASIC2.53□□□□□ -2
CCDC8Q9H0W5 MIR568-201ENST00000385036 95 ntBASIC2.53□□□□□ -2
CCDC8Q9H0W5 AC069257.2-201ENST00000441819 155 ntBASIC2.53□□□□□ -2
CCDC8Q9H0W5 RPS27P22-201ENST00000478056 241 ntBASIC2.53□□□□□ -2
CCDC8Q9H0W5 RPL36AP21-201ENST00000490372 323 ntBASIC2.53□□□□□ -2
CCDC8Q9H0W5 AC004817.2-201ENST00000561794 651 ntBASIC2.53□□□□□ -2
CCDC8Q9H0W5 SNRPGP19-201ENST00000603826 189 ntBASIC2.53□□□□□ -2
CCDC8Q9H0W5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CCDC8Q9H0W5 Y_RNA.193-201ENST00000363979 102 ntBASIC2.52□□□□□ -2.01
CCDC8Q9H0W5 Y_RNA.461-201ENST00000384263 103 ntBASIC2.52□□□□□ -2.01
CCDC8Q9H0W5 Y_RNA.541-201ENST00000384640 113 ntBASIC2.52□□□□□ -2.01
CCDC8Q9H0W5 RNU6-417P-201ENST00000384712 107 ntBASIC2.52□□□□□ -2.01
CCDC8Q9H0W5 RNA5SP450-201ENST00000411206 102 ntBASIC2.52□□□□□ -2.01
CCDC8Q9H0W5 AL445646.1-201ENST00000431784 216 ntBASIC2.52□□□□□ -2.01
CCDC8Q9H0W5 AC055731.1-201ENST00000474387 401 ntBASIC2.52□□□□□ -2.01
CCDC8Q9H0W5 RNU6-1278P-201ENST00000516130 107 ntBASIC2.52□□□□□ -2.01
CCDC8Q9H0W5 RNU6-966P-201ENST00000516479 104 ntBASIC2.52□□□□□ -2.01
CCDC8Q9H0W5 RNU1-142P-201ENST00000516682 145 ntBASIC2.52□□□□□ -2.01
CCDC8Q9H0W5 AC012640.5-201ENST00000623897 319 ntBASIC2.52□□□□□ -2.01
CCDC8Q9H0W5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CCDC8Q9H0W5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC8Q9H0W5 RNU6-862P-201ENST00000362804 105 ntBASIC2.51□□□□□ -2.01
CCDC8Q9H0W5 RNU6-1019P-201ENST00000364424 107 ntBASIC2.51□□□□□ -2.01
CCDC8Q9H0W5 Y_RNA.288-201ENST00000364854 92 ntBASIC2.51□□□□□ -2.01
CCDC8Q9H0W5 RNA5SP160-201ENST00000364866 120 ntBASIC2.51□□□□□ -2.01
CCDC8Q9H0W5 RNU6-505P-201ENST00000384427 107 ntBASIC2.51□□□□□ -2.01
CCDC8Q9H0W5 RNU6-102P-201ENST00000384485 104 ntBASIC2.51□□□□□ -2.01
CCDC8Q9H0W5 MIR215-201ENST00000384858 110 ntBASIC2.51□□□□□ -2.01
CCDC8Q9H0W5 MIR562-201ENST00000384894 95 ntBASIC2.51□□□□□ -2.01
CCDC8Q9H0W5 RNU6-482P-201ENST00000391068 107 ntBASIC2.51□□□□□ -2.01
CCDC8Q9H0W5 RNU7-94P-201ENST00000459576 63 ntBASIC2.51□□□□□ -2.01
CCDC8Q9H0W5 HMGB3P3-201ENST00000510526 400 ntBASIC2.51□□□□□ -2.01
CCDC8Q9H0W5 AP005660.1-201ENST00000522972 293 ntBASIC2.51□□□□□ -2.01
CCDC8Q9H0W5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC8Q9H0W5 AC023157.2-201ENST00000540596 141 ntBASIC2.51□□□□□ -2.01
CCDC8Q9H0W5 AC069114.2-201ENST00000604699 304 ntBASIC2.51□□□□□ -2.01
CCDC8Q9H0W5 AC022513.1-201ENST00000624512 117 ntBASIC2.51□□□□□ -2.01
CCDC8Q9H0W5 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.51□□□□□ -2.01
CCDC8Q9H0W5 AC010615.1-201ENST00000594254 1764 ntBASIC2.51□□□□□ -2.01
CCDC8Q9H0W5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC8Q9H0W5 AC080100.1-201ENST00000624239 5356 ntBASIC2.5□□□□□ -2.01
CCDC8Q9H0W5 RNU1-22P-201ENST00000363334 158 ntBASIC2.5□□□□□ -2.01
CCDC8Q9H0W5 RNU6-407P-201ENST00000365280 104 ntBASIC2.5□□□□□ -2.01
CCDC8Q9H0W5 Y_RNA.456-201ENST00000384232 111 ntBASIC2.5□□□□□ -2.01
CCDC8Q9H0W5 RNU6-472P-201ENST00000384299 107 ntBASIC2.5□□□□□ -2.01
CCDC8Q9H0W5 MIR597-201ENST00000384968 97 ntBASIC2.5□□□□□ -2.01
CCDC8Q9H0W5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC8Q9H0W5 AC097462.1-201ENST00000514125 324 ntBASIC2.5□□□□□ -2.01
CCDC8Q9H0W5 SERF1AP1-201ENST00000514575 187 ntBASIC2.5□□□□□ -2.01
CCDC8Q9H0W5 RNU6-1338P-201ENST00000516328 91 ntBASIC2.5□□□□□ -2.01
CCDC8Q9H0W5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.5□□□□□ -2.01
CCDC8Q9H0W5 RPL21P9-201ENST00000556149 474 ntBASIC2.5□□□□□ -2.01
CCDC8Q9H0W5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC8Q9H0W5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC8Q9H0W5 AL391987.6-201ENST00000305671 199 ntBASIC2.49□□□□□ -2.01
CCDC8Q9H0W5 RNU6-702P-201ENST00000364982 107 ntBASIC2.49□□□□□ -2.01
CCDC8Q9H0W5 Y_RNA.368-201ENST00000365547 113 ntBASIC2.49□□□□□ -2.01
CCDC8Q9H0W5 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC8Q9H0W5 RNU6-514P-201ENST00000384208 107 ntBASIC2.49□□□□□ -2.01
CCDC8Q9H0W5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CCDC8Q9H0W5 AC099677.2-201ENST00000436385 175 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms