Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC107297.1-201ENST00000459991 176 ntBASIC-1.02□□□□□ -2.57
SCAPERQ9BY12 RNU6-344P-201ENST00000516635 111 ntBASIC-1.02□□□□□ -2.57
SCAPERQ9BY12 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-1.02□□□□□ -2.57
SCAPERQ9BY12 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-1.02□□□□□ -2.57
SCAPERQ9BY12 MIR6828-201ENST00000636181 60 ntBASIC-1.02□□□□□ -2.57
SCAPERQ9BY12 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.02□□□□□ -2.57
SCAPERQ9BY12 SNORA24.1-201ENST00000384401 135 ntBASIC-1.03□□□□□ -2.57
SCAPERQ9BY12 MIR196A1-201ENST00000388006 70 ntBASIC-1.03□□□□□ -2.57
SCAPERQ9BY12 AL512326.2-201ENST00000426359 151 ntBASIC-1.03□□□□□ -2.57
SCAPERQ9BY12 POLR2KP2-201ENST00000438155 177 ntBASIC-1.03□□□□□ -2.57
SCAPERQ9BY12 AL117351.1-201ENST00000438864 766 ntBASIC-1.03□□□□□ -2.57
SCAPERQ9BY12 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.03□□□□□ -2.57
SCAPERQ9BY12 RNU6-469P-201ENST00000516253 101 ntBASIC-1.03□□□□□ -2.57
SCAPERQ9BY12 RNU6-448P-201ENST00000517052 107 ntBASIC-1.03□□□□□ -2.57
SCAPERQ9BY12 AC068587.5-201ENST00000528506 175 ntBASIC-1.03□□□□□ -2.57
SCAPERQ9BY12 MTND4LP25-201ENST00000570218 163 ntBASIC-1.03□□□□□ -2.57
SCAPERQ9BY12 MIR3152-201ENST00000579801 74 ntBASIC-1.03□□□□□ -2.57
SCAPERQ9BY12 RNU6-88P-201ENST00000606801 100 ntBASIC-1.03□□□□□ -2.57
SCAPERQ9BY12 AC006435.5-201ENST00000624486 112 ntBASIC-1.03□□□□□ -2.57
SCAPERQ9BY12 AC106754.1-201ENST00000562632 1513 ntBASIC-1.03□□□□□ -2.57
SCAPERQ9BY12 AC117470.1-201ENST00000381974 330 ntBASIC-1.04□□□□□ -2.58
SCAPERQ9BY12 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-1.04□□□□□ -2.58
SCAPERQ9BY12 AC133104.1-201ENST00000429100 218 ntBASIC-1.04□□□□□ -2.58
SCAPERQ9BY12 AL353572.1-201ENST00000442490 417 ntBASIC-1.04□□□□□ -2.58
SCAPERQ9BY12 RNU7-182P-201ENST00000459009 62 ntBASIC-1.04□□□□□ -2.58
SCAPERQ9BY12 SNORD123-201ENST00000459473 70 ntBASIC-1.04□□□□□ -2.58
SCAPERQ9BY12 AC123904.2-201ENST00000548059 300 ntBASIC-1.04□□□□□ -2.58
SCAPERQ9BY12 AP000753.3-201ENST00000604083 169 ntBASIC-1.04□□□□□ -2.58
SCAPERQ9BY12 AL442067.1-201ENST00000613261 223 ntBASIC-1.04□□□□□ -2.58
SCAPERQ9BY12 Y_RNA.46-201ENST00000362695 102 ntBASIC-1.05□□□□□ -2.58
SCAPERQ9BY12 MIR548L-201ENST00000408303 86 ntBASIC-1.05□□□□□ -2.58
SCAPERQ9BY12 MIR320B2-201ENST00000408479 138 ntBASIC-1.05□□□□□ -2.58
SCAPERQ9BY12 MTCO3P19-201ENST00000415864 321 ntBASIC-1.05□□□□□ -2.58
SCAPERQ9BY12 BTBD7P2-201ENST00000441962 620 ntBASIC-1.05□□□□□ -2.58
SCAPERQ9BY12 AC107934.1-201ENST00000522215 217 ntBASIC-1.05□□□□□ -2.58
SCAPERQ9BY12 NAMPTP3-201ENST00000569273 224 ntBASIC-1.05□□□□□ -2.58
SCAPERQ9BY12 MTND1P8-201ENST00000571424 950 ntBASIC-1.05□□□□□ -2.58
SCAPERQ9BY12 AC005776.1-201ENST00000603164 290 ntBASIC-1.05□□□□□ -2.58
SCAPERQ9BY12 AP002802.2-201ENST00000605877 235 ntBASIC-1.05□□□□□ -2.58
SCAPERQ9BY12 SNORA3B-201ENST00000391305 131 ntBASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 ELOCP21-201ENST00000412558 336 ntBASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 AC091133.4-201ENST00000511142 308 ntBASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 RNU7-172P-201ENST00000517125 64 ntBASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 MIR4324-201ENST00000584846 72 ntBASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 SNORD92-201ENST00000585078 85 ntBASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 RNU4-21P-201ENST00000362802 126 ntBASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 SNORD56.2-201ENST00000363242 71 ntBASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 RNU6-205P-201ENST00000390858 107 ntBASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 RNU2-54P-201ENST00000410299 190 ntBASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 RNU2-8P-201ENST00000410727 190 ntBASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 MTND2P30-201ENST00000456663 382 ntBASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 SNORD65B-201ENST00000459126 73 ntBASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 AC097462.1-201ENST00000514125 324 ntBASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 RNU6-897P-201ENST00000517135 105 ntBASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 AL358944.1-201ENST00000528537 144 ntBASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 AC068587.4-201ENST00000533893 186 ntBASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 CR383656.4-201ENST00000546909 122 ntBASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 AC087683.1-201ENST00000591187 441 ntBASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 AC091304.10-201ENST00000641554 121 ntBASIC-1.06□□□□□ -2.58
SCAPERQ9BY12 RNA5SP205-201ENST00000364653 136 ntBASIC-1.07□□□□□ -2.58
SCAPERQ9BY12 SNORD114-3-201ENST00000364969 75 ntBASIC-1.07□□□□□ -2.58
SCAPERQ9BY12 MIR125B2-201ENST00000385128 89 ntBASIC-1.07□□□□□ -2.58
SCAPERQ9BY12 RNU2-39P-201ENST00000410604 198 ntBASIC-1.07□□□□□ -2.58
SCAPERQ9BY12 ZNF736P7Y-201ENST00000425158 820 ntBASIC-1.07□□□□□ -2.58
SCAPERQ9BY12 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.07□□□□□ -2.58
SCAPERQ9BY12 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.07□□□□□ -2.58
SCAPERQ9BY12 ZNF114P1-201ENST00000453500 292 ntBASIC-1.07□□□□□ -2.58
SCAPERQ9BY12 MTND1P12-201ENST00000455231 147 ntBASIC-1.07□□□□□ -2.58
SCAPERQ9BY12 SCARNA17-201ENST00000516183 144 ntBASIC-1.07□□□□□ -2.58
SCAPERQ9BY12 MIR6514-201ENST00000622549 70 ntBASIC-1.07□□□□□ -2.58
SCAPERQ9BY12 SNORD114-14-201ENST00000362723 75 ntBASIC-1.08□□□□□ -2.58
SCAPERQ9BY12 SNORA26.5-201ENST00000391215 123 ntBASIC-1.08□□□□□ -2.58
SCAPERQ9BY12 MTCO2P33-201ENST00000402100 465 ntBASIC-1.08□□□□□ -2.58
SCAPERQ9BY12 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-1.08□□□□□ -2.58
SCAPERQ9BY12 AC109327.2-201ENST00000448339 378 ntBASIC-1.08□□□□□ -2.58
SCAPERQ9BY12 RNU6-201P-201ENST00000517100 61 ntBASIC-1.08□□□□□ -2.58
SCAPERQ9BY12 MIR378F-201ENST00000578143 78 ntBASIC-1.08□□□□□ -2.58
SCAPERQ9BY12 AC121334.2-201ENST00000605387 271 ntBASIC-1.08□□□□□ -2.58
SCAPERQ9BY12 MTND4P9-201ENST00000507819 1346 ntBASIC-1.08□□□□□ -2.58
SCAPERQ9BY12 RNU6-827P-201ENST00000365553 106 ntBASIC-1.09□□□□□ -2.58
SCAPERQ9BY12 SNORD83B-201ENST00000386745 93 ntBASIC-1.09□□□□□ -2.58
SCAPERQ9BY12 SNORA40.2-201ENST00000390847 128 ntBASIC-1.09□□□□□ -2.58
SCAPERQ9BY12 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.09□□□□□ -2.58
SCAPERQ9BY12 SPINT5P-201ENST00000448174 155 ntBASIC-1.09□□□□□ -2.58
SCAPERQ9BY12 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.09□□□□□ -2.58
SCAPERQ9BY12 RNU6-685P-201ENST00000517088 95 ntBASIC-1.09□□□□□ -2.58
SCAPERQ9BY12 RNU7-156P-201ENST00000517214 74 ntBASIC-1.09□□□□□ -2.58
SCAPERQ9BY12 MIR4264-201ENST00000583520 66 ntBASIC-1.09□□□□□ -2.58
SCAPERQ9BY12 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.1□□□□□ -2.59
SCAPERQ9BY12 RNU6-560P-201ENST00000364007 108 ntBASIC-1.1□□□□□ -2.59
SCAPERQ9BY12 RNU6-61P-201ENST00000365528 109 ntBASIC-1.1□□□□□ -2.59
SCAPERQ9BY12 MIR563-201ENST00000385080 79 ntBASIC-1.1□□□□□ -2.59
SCAPERQ9BY12 RNU6-387P-201ENST00000411331 105 ntBASIC-1.1□□□□□ -2.59
SCAPERQ9BY12 SUMO1P3-201ENST00000439961 304 ntBASIC-1.1□□□□□ -2.59
SCAPERQ9BY12 AL031274.1-201ENST00000450334 232 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms