Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC008873.1-201ENST00000625051 138 ntBASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 AC068205.3-201ENST00000636385 468 ntBASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 LINC02555-201ENST00000563933 1951 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 MIR424-201ENST00000362227 98 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 RNA5SP493-201ENST00000364115 91 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 Y_RNA.326-201ENST00000365176 113 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 RNU6-975P-201ENST00000384296 105 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 SNORD14D-201ENST00000384390 87 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 MIR586-201ENST00000385035 97 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 RNA5SP465-201ENST00000391195 109 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 MIR1302-11-201ENST00000408051 138 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 MIR1302-9-201ENST00000408365 138 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 MIR1302-10-201ENST00000408734 138 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 SNORD12B-201ENST00000410433 91 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 RPL30P13-201ENST00000418873 348 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 RNU7-57P-201ENST00000459540 60 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 Y_RNA.683-201ENST00000516508 93 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 RNU6-911P-201ENST00000516523 104 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 RNU6-1012P-201ENST00000516606 109 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 AC008269.2-201ENST00000561915 1105 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 MIR3169-201ENST00000578032 83 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 MIR1302-2-201ENST00000607096 138 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 PART1_1.1-201ENST00000611761 217 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 AL353770.2-201ENST00000620024 78 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 U6.92-201ENST00000636464 89 ntBASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.18□□□□□ -2.22
RSPO3Q9BXY4 Y_RNA.39-201ENST00000362620 98 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 Y_RNA.99-201ENST00000363138 105 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 RNU6-454P-201ENST00000364292 107 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 RNU6-450P-201ENST00000364654 107 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 RNU6-438P-201ENST00000365561 103 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 RNU6-203P-201ENST00000384038 104 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 Y_RNA.458-201ENST00000384240 102 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 RNY3P4-201ENST00000384428 101 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 RNU6-1026P-201ENST00000384465 108 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 MIR597-201ENST00000384968 97 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 MIR300-201ENST00000401138 83 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 MRPL42P3-201ENST00000401492 326 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 RNU6-130P-201ENST00000411112 103 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 AC016909.1-201ENST00000415916 166 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 AC060773.1-201ENST00000421698 310 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 PCNPP5-201ENST00000452246 481 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 AC067942.3-201ENST00000512025 362 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 SNORA40.9-201ENST00000515895 93 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 SNORA40.14-201ENST00000516543 86 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 RNA5SP102-201ENST00000516865 106 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 MIR2355-201ENST00000517199 87 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 AP003072.1-201ENST00000531740 145 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 AC018448.1-201ENST00000552843 316 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 MIR4659A-201ENST00000580269 81 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 AC022432.1-201ENST00000595739 310 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 AC136443.5-201ENST00000603741 370 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 AC040896.1-201ENST00000613819 479 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 AC083806.3-201ENST00000614016 455 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 AC240442.1-201ENST00000616055 283 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 AC005592.1-201ENST00000566527 1640 ntBASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.17□□□□□ -2.22
RSPO3Q9BXY4 Y_RNA.27-201ENST00000362540 103 ntBASIC1.16□□□□□ -2.22
RSPO3Q9BXY4 MIR613-201ENST00000385248 95 ntBASIC1.16□□□□□ -2.22
RSPO3Q9BXY4 RNU6-823P-201ENST00000391042 103 ntBASIC1.16□□□□□ -2.22
RSPO3Q9BXY4 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
RSPO3Q9BXY4 MIR320B2-201ENST00000408479 138 ntBASIC1.16□□□□□ -2.22
RSPO3Q9BXY4 MIR1185-2-201ENST00000408687 86 ntBASIC1.16□□□□□ -2.22
RSPO3Q9BXY4 RNU6-57P-201ENST00000411348 103 ntBASIC1.16□□□□□ -2.22
RSPO3Q9BXY4 RPS4XP11-201ENST00000446897 772 ntBASIC1.16□□□□□ -2.22
RSPO3Q9BXY4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.16□□□□□ -2.22
RSPO3Q9BXY4 AC010655.3-201ENST00000478818 450 ntBASIC1.16□□□□□ -2.22
RSPO3Q9BXY4 RNU6-408P-201ENST00000515910 100 ntBASIC1.16□□□□□ -2.22
RSPO3Q9BXY4 SNORA25.10-201ENST00000515926 124 ntBASIC1.16□□□□□ -2.22
RSPO3Q9BXY4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.16□□□□□ -2.22
RSPO3Q9BXY4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.16□□□□□ -2.22
RSPO3Q9BXY4 MIR4753-201ENST00000585119 83 ntBASIC1.16□□□□□ -2.22
RSPO3Q9BXY4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.16□□□□□ -2.22
RSPO3Q9BXY4 AC099654.10-201ENST00000640395 161 ntBASIC1.16□□□□□ -2.22
RSPO3Q9BXY4 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.16□□□□□ -2.22
RSPO3Q9BXY4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
RSPO3Q9BXY4 SNORA33.2-201ENST00000365413 134 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 SNORD26-201ENST00000384147 75 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.527-201ENST00000384573 102 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 MIR29C-201ENST00000385231 88 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 AL117342.1-201ENST00000404861 406 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 AC113618.1-201ENST00000416747 285 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 AC099677.2-201ENST00000436385 175 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 UQCRBP2-201ENST00000447827 297 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 U8.20-201ENST00000459445 131 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 RNA5SP57-201ENST00000459463 123 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 RNU6-221P-201ENST00000459541 99 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 RNU6-948P-201ENST00000516374 107 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 RNU6-856P-201ENST00000516959 98 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 RNU1-92P-201ENST00000517017 135 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 AC025647.1-201ENST00000517879 253 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 RNU6-988P-201ENST00000519081 107 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms