Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 U3.44-201ENST00000458938 192 ntBASIC3.65□□□□□ -1.83
COL25A1Q9BXS0 snoU13.15-201ENST00000459407 104 ntBASIC3.65□□□□□ -1.83
COL25A1Q9BXS0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.65□□□□□ -1.83
COL25A1Q9BXS0 AC015712.3-201ENST00000559380 164 ntBASIC3.65□□□□□ -1.83
COL25A1Q9BXS0 MIR4668-201ENST00000582284 70 ntBASIC3.65□□□□□ -1.83
COL25A1Q9BXS0 Z83843.1-201ENST00000604070 3685 ntBASIC3.65□□□□□ -1.83
COL25A1Q9BXS0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
COL25A1Q9BXS0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 Y_RNA.96-201ENST00000363092 109 ntBASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 Y_RNA.360-201ENST00000365512 102 ntBASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 SNORD38C-201ENST00000384381 69 ntBASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 AC004552.1-201ENST00000419089 348 ntBASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 HMGN2P21-201ENST00000447764 270 ntBASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 RPS26P3-201ENST00000470205 348 ntBASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 AC090543.2-201ENST00000483963 348 ntBASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 AC004057.1-201ENST00000485827 348 ntBASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 RNU7-172P-201ENST00000517125 64 ntBASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 MIR4305-201ENST00000583252 102 ntBASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 AC008739.2-201ENST00000597006 317 ntBASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 AC087741.2-201ENST00000619415 172 ntBASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 U4.6-201ENST00000621618 127 ntBASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.64□□□□□ -1.83
COL25A1Q9BXS0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 OTUD4P1-201ENST00000237841 3067 ntBASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 AC009487.4-201ENST00000624969 3585 ntBASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 Y_RNA.410-201ENST00000383992 113 ntBASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 AC084357.1-201ENST00000473404 255 ntBASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 HMGN1P7-201ENST00000491722 313 ntBASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 PPBPP1-201ENST00000510807 373 ntBASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 RNU2-35P-201ENST00000516446 142 ntBASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 HIGD1AP1-201ENST00000550979 275 ntBASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 MIR4319-201ENST00000577285 85 ntBASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 MIR3618-201ENST00000580330 88 ntBASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 FAM35DP-201ENST00000323387 2712 ntBASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 AL672167.1-203ENST00000641299 2975 ntBASIC3.63□□□□□ -1.83
COL25A1Q9BXS0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 AC017071.1-201ENST00000564407 2204 ntBASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 AC093908.1-201ENST00000623125 8092 ntBASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 RNU6-363P-201ENST00000362895 105 ntBASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 MIR3074-201ENST00000384885 81 ntBASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 SNORD96B-201ENST00000386148 79 ntBASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 RNU6-733P-201ENST00000410759 104 ntBASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 RNU1-131P-201ENST00000458943 161 ntBASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 RAC1P2-201ENST00000511164 579 ntBASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 RNU6-1096P-201ENST00000517089 102 ntBASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 MIR4438-201ENST00000585271 93 ntBASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 MIR7702-201ENST00000621931 59 ntBASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 AC073308.1-201ENST00000623696 305 ntBASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 AP000553.6-201ENST00000641242 118 ntBASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 AC091304.10-201ENST00000641554 121 ntBASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.62□□□□□ -1.83
COL25A1Q9BXS0 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 Y_RNA.94-201ENST00000363068 106 ntBASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 Y_RNA.155-201ENST00000363632 101 ntBASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 RNU6-1189P-201ENST00000383958 107 ntBASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 SNORA18-201ENST00000384416 132 ntBASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 RNU2-49P-201ENST00000410666 184 ntBASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 Y_RNA.611-201ENST00000410682 108 ntBASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 RNA5SP184-201ENST00000411071 108 ntBASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 AC108938.1-201ENST00000451204 136 ntBASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 RNU6-948P-201ENST00000516374 107 ntBASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 MIR3683-201ENST00000580847 82 ntBASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 MIR1255B1-201ENST00000636325 63 ntBASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 AP003122.5-201ENST00000527668 3766 ntBASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms