Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 Y_RNA.412-201ENST00000384001 104 ntBASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 RNU6-1323P-201ENST00000384025 107 ntBASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 RNU6-417P-201ENST00000384712 107 ntBASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 SNORA36B-201ENST00000410438 131 ntBASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 RNU6-383P-201ENST00000410864 94 ntBASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 COTL1P1-201ENST00000422309 375 ntBASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 RPL36AP21-201ENST00000490372 323 ntBASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 RNU6-1041P-201ENST00000516254 102 ntBASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 RNU7-172P-201ENST00000517125 64 ntBASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 MIR3200-201ENST00000580767 85 ntBASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 AP003357.1-201ENST00000604497 148 ntBASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 AC104465.1-201ENST00000611365 139 ntBASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 AL449363.1-201ENST00000617815 186 ntBASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.59□□□□□ -2
HIST1H2AJQ99878 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.59□□□□□ -2
HIST1H2AJQ99878 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
HIST1H2AJQ99878 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
HIST1H2AJQ99878 RNU5E-9P-201ENST00000411164 104 ntBASIC2.58□□□□□ -2
HIST1H2AJQ99878 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.58□□□□□ -2
HIST1H2AJQ99878 AC096725.1-201ENST00000514266 313 ntBASIC2.58□□□□□ -2
HIST1H2AJQ99878 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.58□□□□□ -2
HIST1H2AJQ99878 RNU6-1278P-201ENST00000516130 107 ntBASIC2.58□□□□□ -2
HIST1H2AJQ99878 RNU6-453P-201ENST00000516819 85 ntBASIC2.58□□□□□ -2
HIST1H2AJQ99878 RNU6-1212P-201ENST00000517023 104 ntBASIC2.58□□□□□ -2
HIST1H2AJQ99878 AC022202.1-201ENST00000613515 211 ntBASIC2.58□□□□□ -2
HIST1H2AJQ99878 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.58□□□□□ -2
HIST1H2AJQ99878 AC021753.1-201ENST00000635724 168 ntBASIC2.58□□□□□ -2
HIST1H2AJQ99878 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.57□□□□□ -2
HIST1H2AJQ99878 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HIST1H2AJQ99878 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HIST1H2AJQ99878 snoU2-30.2-201ENST00000362805 70 ntBASIC2.57□□□□□ -2
HIST1H2AJQ99878 RNU4-13P-201ENST00000364019 141 ntBASIC2.57□□□□□ -2
HIST1H2AJQ99878 SNORD56.5-201ENST00000364281 72 ntBASIC2.57□□□□□ -2
HIST1H2AJQ99878 MIR526A2-201ENST00000390198 65 ntBASIC2.57□□□□□ -2
HIST1H2AJQ99878 AL162725.1-201ENST00000435405 301 ntBASIC2.57□□□□□ -2
HIST1H2AJQ99878 AC245047.8-201ENST00000456455 284 ntBASIC2.57□□□□□ -2
HIST1H2AJQ99878 RPL23AP54-201ENST00000495129 419 ntBASIC2.57□□□□□ -2
HIST1H2AJQ99878 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.57□□□□□ -2
HIST1H2AJQ99878 SCARNA8-201ENST00000515924 131 ntBASIC2.57□□□□□ -2
HIST1H2AJQ99878 RN7SKP164-201ENST00000516138 266 ntBASIC2.57□□□□□ -2
HIST1H2AJQ99878 AC079600.2-201ENST00000550076 130 ntBASIC2.57□□□□□ -2
HIST1H2AJQ99878 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.57□□□□□ -2
HIST1H2AJQ99878 AC127455.1-201ENST00000565496 145 ntBASIC2.57□□□□□ -2
HIST1H2AJQ99878 MIR4724-201ENST00000579485 89 ntBASIC2.57□□□□□ -2
HIST1H2AJQ99878 LARP7P3-201ENST00000579888 337 ntBASIC2.57□□□□□ -2
HIST1H2AJQ99878 U6.73-201ENST00000619194 103 ntBASIC2.57□□□□□ -2
HIST1H2AJQ99878 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.56□□□□□ -2
HIST1H2AJQ99878 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.56□□□□□ -2
HIST1H2AJQ99878 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.56□□□□□ -2
HIST1H2AJQ99878 MIR367-201ENST00000362299 68 ntBASIC2.56□□□□□ -2
HIST1H2AJQ99878 Y_RNA.8-201ENST00000362353 102 ntBASIC2.56□□□□□ -2
HIST1H2AJQ99878 Y_RNA.121-201ENST00000363309 113 ntBASIC2.56□□□□□ -2
HIST1H2AJQ99878 RNU6-144P-201ENST00000383951 107 ntBASIC2.56□□□□□ -2
HIST1H2AJQ99878 RNU6-804P-201ENST00000384286 107 ntBASIC2.56□□□□□ -2
HIST1H2AJQ99878 RNU6-160P-201ENST00000384591 107 ntBASIC2.56□□□□□ -2
HIST1H2AJQ99878 RNU6-376P-201ENST00000384731 106 ntBASIC2.56□□□□□ -2
HIST1H2AJQ99878 RNU6-1186P-201ENST00000410429 97 ntBASIC2.56□□□□□ -2
HIST1H2AJQ99878 AC010154.1-201ENST00000425857 269 ntBASIC2.56□□□□□ -2
HIST1H2AJQ99878 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.56□□□□□ -2
HIST1H2AJQ99878 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.56□□□□□ -2
HIST1H2AJQ99878 AC091021.1-201ENST00000468051 388 ntBASIC2.56□□□□□ -2
HIST1H2AJQ99878 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.56□□□□□ -2
HIST1H2AJQ99878 AC004486.1-201ENST00000546846 233 ntBASIC2.56□□□□□ -2
HIST1H2AJQ99878 MIR7106-201ENST00000612419 65 ntBASIC2.56□□□□□ -2
HIST1H2AJQ99878 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.55□□□□□ -2
HIST1H2AJQ99878 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
HIST1H2AJQ99878 RNU6-859P-201ENST00000362728 107 ntBASIC2.55□□□□□ -2
HIST1H2AJQ99878 SNORD115-3-201ENST00000363100 82 ntBASIC2.55□□□□□ -2
HIST1H2AJQ99878 MT-TT-201ENST00000387460 66 ntBASIC2.55□□□□□ -2
HIST1H2AJQ99878 RNA5SP210-201ENST00000391034 120 ntBASIC2.55□□□□□ -2
HIST1H2AJQ99878 RNA5SP467-201ENST00000391274 118 ntBASIC2.55□□□□□ -2
HIST1H2AJQ99878 RNU6-1135P-201ENST00000411083 103 ntBASIC2.55□□□□□ -2
HIST1H2AJQ99878 EDDM3CP-201ENST00000415977 425 ntBASIC2.55□□□□□ -2
HIST1H2AJQ99878 EBAG9P1-201ENST00000418955 543 ntBASIC2.55□□□□□ -2
HIST1H2AJQ99878 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.55□□□□□ -2
HIST1H2AJQ99878 Y_RNA.797-201ENST00000515977 94 ntBASIC2.55□□□□□ -2
HIST1H2AJQ99878 RNU6-1146P-201ENST00000516282 102 ntBASIC2.55□□□□□ -2
HIST1H2AJQ99878 RNU6-1007P-201ENST00000516586 107 ntBASIC2.55□□□□□ -2
HIST1H2AJQ99878 RNU7-116P-201ENST00000516940 62 ntBASIC2.55□□□□□ -2
HIST1H2AJQ99878 GTF3AP2-201ENST00000557014 266 ntBASIC2.55□□□□□ -2
HIST1H2AJQ99878 MIR5092-201ENST00000583139 88 ntBASIC2.55□□□□□ -2
HIST1H2AJQ99878 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.55□□□□□ -2
HIST1H2AJQ99878 AC006386.2-201ENST00000624491 75 ntBASIC2.55□□□□□ -2
HIST1H2AJQ99878 AC012005.1-201ENST00000624575 75 ntBASIC2.55□□□□□ -2
HIST1H2AJQ99878 MIR338-201ENST00000636369 67 ntBASIC2.55□□□□□ -2
HIST1H2AJQ99878 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.55□□□□□ -2
HIST1H2AJQ99878 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
HIST1H2AJQ99878 Y_RNA.75-201ENST00000362927 97 ntBASIC2.54□□□□□ -2
HIST1H2AJQ99878 Y_RNA.170-201ENST00000363746 110 ntBASIC2.54□□□□□ -2
HIST1H2AJQ99878 Y_RNA.229-201ENST00000364347 113 ntBASIC2.54□□□□□ -2
HIST1H2AJQ99878 Z92545.1-201ENST00000411782 234 ntBASIC2.54□□□□□ -2
HIST1H2AJQ99878 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.54□□□□□ -2
HIST1H2AJQ99878 AL353689.1-201ENST00000438895 199 ntBASIC2.54□□□□□ -2
HIST1H2AJQ99878 RPS4XP11-201ENST00000446897 772 ntBASIC2.54□□□□□ -2
HIST1H2AJQ99878 RNU1-131P-201ENST00000458943 161 ntBASIC2.54□□□□□ -2
HIST1H2AJQ99878 SNORD109B-201ENST00000458961 67 ntBASIC2.54□□□□□ -2
HIST1H2AJQ99878 SNORD109A-201ENST00000459128 67 ntBASIC2.54□□□□□ -2
HIST1H2AJQ99878 RNU6-437P-201ENST00000459408 95 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 204.4 ms