Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.06□□□□□ -2.08
NPAS1Q99742 MIR4448-201ENST00000584360 86 ntBASIC2.06□□□□□ -2.08
NPAS1Q99742 AC069114.2-201ENST00000604699 304 ntBASIC2.06□□□□□ -2.08
NPAS1Q99742 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.06□□□□□ -2.08
NPAS1Q99742 U6.73-201ENST00000619194 103 ntBASIC2.06□□□□□ -2.08
NPAS1Q99742 7SK.10-201ENST00000621414 298 ntBASIC2.06□□□□□ -2.08
NPAS1Q99742 MIR6766-201ENST00000622641 72 ntBASIC2.06□□□□□ -2.08
NPAS1Q99742 AC127459.3-201ENST00000624328 466 ntBASIC2.06□□□□□ -2.08
NPAS1Q99742 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.06□□□□□ -2.08
NPAS1Q99742 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.05□□□□□ -2.08
NPAS1Q99742 AL356292.1-201ENST00000283110 373 ntBASIC2.05□□□□□ -2.08
NPAS1Q99742 RNU4-80P-201ENST00000363200 141 ntBASIC2.05□□□□□ -2.08
NPAS1Q99742 RNU4-13P-201ENST00000364019 141 ntBASIC2.05□□□□□ -2.08
NPAS1Q99742 Y_RNA.288-201ENST00000364854 92 ntBASIC2.05□□□□□ -2.08
NPAS1Q99742 Y_RNA.556-201ENST00000384677 113 ntBASIC2.05□□□□□ -2.08
NPAS1Q99742 MIR568-201ENST00000385036 95 ntBASIC2.05□□□□□ -2.08
NPAS1Q99742 RNA5SP450-201ENST00000411206 102 ntBASIC2.05□□□□□ -2.08
NPAS1Q99742 RPL23AP7-203ENST00000449021 469 ntBASIC2.05□□□□□ -2.08
NPAS1Q99742 AC055731.1-201ENST00000474387 401 ntBASIC2.05□□□□□ -2.08
NPAS1Q99742 RNU6-1278P-201ENST00000516130 107 ntBASIC2.05□□□□□ -2.08
NPAS1Q99742 RNVU1-2-201ENST00000516326 135 ntBASIC2.05□□□□□ -2.08
NPAS1Q99742 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.05□□□□□ -2.08
NPAS1Q99742 AC005828.6-201ENST00000606610 232 ntBASIC2.05□□□□□ -2.08
NPAS1Q99742 AL353149.1-201ENST00000610667 244 ntBASIC2.05□□□□□ -2.08
NPAS1Q99742 U4.1-201ENST00000620349 87 ntBASIC2.05□□□□□ -2.08
NPAS1Q99742 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NPAS1Q99742 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
NPAS1Q99742 MIRLET7G-201ENST00000362280 84 ntBASIC2.04□□□□□ -2.08
NPAS1Q99742 Y_RNA.341-201ENST00000365341 102 ntBASIC2.04□□□□□ -2.08
NPAS1Q99742 Y_RNA.396-201ENST00000383949 103 ntBASIC2.04□□□□□ -2.08
NPAS1Q99742 RNU6-574P-201ENST00000384265 107 ntBASIC2.04□□□□□ -2.08
NPAS1Q99742 RNU6-463P-201ENST00000384340 107 ntBASIC2.04□□□□□ -2.08
NPAS1Q99742 Y_RNA.483-201ENST00000384380 101 ntBASIC2.04□□□□□ -2.08
NPAS1Q99742 MIR221-201ENST00000385135 110 ntBASIC2.04□□□□□ -2.08
NPAS1Q99742 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.04□□□□□ -2.08
NPAS1Q99742 SNORA3.2-201ENST00000408221 125 ntBASIC2.04□□□□□ -2.08
NPAS1Q99742 Z98742.3-201ENST00000418637 326 ntBASIC2.04□□□□□ -2.08
NPAS1Q99742 ZNF702P-202ENST00000434269 1966 ntBASIC2.04□□□□□ -2.08
NPAS1Q99742 AC099677.2-201ENST00000436385 175 ntBASIC2.04□□□□□ -2.08
NPAS1Q99742 MTND4LP30-201ENST00000454092 297 ntBASIC2.04□□□□□ -2.08
NPAS1Q99742 RPS26P55-201ENST00000471178 356 ntBASIC2.04□□□□□ -2.08
NPAS1Q99742 RNU6-1338P-201ENST00000516328 91 ntBASIC2.04□□□□□ -2.08
NPAS1Q99742 AC091544.4-201ENST00000555268 342 ntBASIC2.04□□□□□ -2.08
NPAS1Q99742 MIR4287-201ENST00000579398 78 ntBASIC2.04□□□□□ -2.08
NPAS1Q99742 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.04□□□□□ -2.08
NPAS1Q99742 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.08
NPAS1Q99742 Y_RNA.237-201ENST00000364439 102 ntBASIC2.03□□□□□ -2.08
NPAS1Q99742 RNU6-326P-201ENST00000365480 107 ntBASIC2.03□□□□□ -2.08
NPAS1Q99742 MT-TW-201ENST00000387382 68 ntBASIC2.03□□□□□ -2.08
NPAS1Q99742 RNU11-5P-201ENST00000391216 129 ntBASIC2.03□□□□□ -2.08
NPAS1Q99742 AL117342.1-201ENST00000404861 406 ntBASIC2.03□□□□□ -2.08
NPAS1Q99742 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
NPAS1Q99742 EBAG9P1-201ENST00000418955 543 ntBASIC2.03□□□□□ -2.08
NPAS1Q99742 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.03□□□□□ -2.08
NPAS1Q99742 HSPE1P21-201ENST00000438283 308 ntBASIC2.03□□□□□ -2.08
NPAS1Q99742 AL163195.1-201ENST00000496941 348 ntBASIC2.03□□□□□ -2.08
NPAS1Q99742 RNU7-99P-201ENST00000516271 62 ntBASIC2.03□□□□□ -2.08
NPAS1Q99742 RNU6-1337P-201ENST00000516525 95 ntBASIC2.03□□□□□ -2.08
NPAS1Q99742 RNU6-63P-201ENST00000516690 95 ntBASIC2.03□□□□□ -2.08
NPAS1Q99742 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.03□□□□□ -2.08
NPAS1Q99742 MIR4503-201ENST00000582187 83 ntBASIC2.03□□□□□ -2.08
NPAS1Q99742 AC073413.2-201ENST00000604332 360 ntBASIC2.03□□□□□ -2.08
NPAS1Q99742 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.03□□□□□ -2.08
NPAS1Q99742 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
NPAS1Q99742 SNORD114-7-201ENST00000362520 77 ntBASIC2.02□□□□□ -2.09
NPAS1Q99742 RNU1-22P-201ENST00000363334 158 ntBASIC2.02□□□□□ -2.09
NPAS1Q99742 SNORA33-201ENST00000363664 130 ntBASIC2.02□□□□□ -2.09
NPAS1Q99742 RNU6-1019P-201ENST00000364424 107 ntBASIC2.02□□□□□ -2.09
NPAS1Q99742 RNU2-61P-201ENST00000411069 191 ntBASIC2.02□□□□□ -2.09
NPAS1Q99742 OOSP1P1-201ENST00000423265 274 ntBASIC2.02□□□□□ -2.09
NPAS1Q99742 RPS27P21-201ENST00000486977 252 ntBASIC2.02□□□□□ -2.09
NPAS1Q99742 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.02□□□□□ -2.09
NPAS1Q99742 AC097462.1-201ENST00000514125 324 ntBASIC2.02□□□□□ -2.09
NPAS1Q99742 RNA5SP24-201ENST00000516478 95 ntBASIC2.02□□□□□ -2.09
NPAS1Q99742 MIR514B-201ENST00000516774 80 ntBASIC2.02□□□□□ -2.09
NPAS1Q99742 AC084364.2-201ENST00000546924 395 ntBASIC2.02□□□□□ -2.09
NPAS1Q99742 MIR3149-201ENST00000584629 83 ntBASIC2.02□□□□□ -2.09
NPAS1Q99742 AC002984.1-201ENST00000591692 448 ntBASIC2.02□□□□□ -2.09
NPAS1Q99742 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.02□□□□□ -2.09
NPAS1Q99742 AL590808.1-201ENST00000618696 141 ntBASIC2.02□□□□□ -2.09
NPAS1Q99742 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.02□□□□□ -2.09
NPAS1Q99742 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
NPAS1Q99742 RNU6-702P-201ENST00000364982 107 ntBASIC2.01□□□□□ -2.09
NPAS1Q99742 SNORA48.1-201ENST00000390879 135 ntBASIC2.01□□□□□ -2.09
NPAS1Q99742 RNA5SP508-201ENST00000411327 119 ntBASIC2.01□□□□□ -2.09
NPAS1Q99742 MTCO1P5-201ENST00000433573 344 ntBASIC2.01□□□□□ -2.09
NPAS1Q99742 MTND2P29-201ENST00000438595 412 ntBASIC2.01□□□□□ -2.09
NPAS1Q99742 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.01□□□□□ -2.09
NPAS1Q99742 TRBV12-1-201ENST00000479785 344 ntBASIC2.01□□□□□ -2.09
NPAS1Q99742 AC104435.1-201ENST00000483483 166 ntBASIC2.01□□□□□ -2.09
NPAS1Q99742 SERF1AP1-201ENST00000514575 187 ntBASIC2.01□□□□□ -2.09
NPAS1Q99742 AC024995.1-201ENST00000523014 93 ntBASIC2.01□□□□□ -2.09
NPAS1Q99742 AC022513.1-201ENST00000624512 117 ntBASIC2.01□□□□□ -2.09
NPAS1Q99742 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
NPAS1Q99742 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
NPAS1Q99742 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
NPAS1Q99742 Y_RNA.54-201ENST00000362766 105 ntBASIC2□□□□□ -2.09
NPAS1Q99742 RNA5SP37-201ENST00000365420 130 ntBASIC2□□□□□ -2.09
NPAS1Q99742 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2□□□□□ -2.09
NPAS1Q99742 Y_RNA.418-201ENST00000384029 102 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 1030.5 ms