Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 RNU6-63P-201ENST00000516690 95 ntBASIC2.41□□□□□ -2.02
TIMP4Q99727 AC004486.1-201ENST00000546846 233 ntBASIC2.41□□□□□ -2.02
TIMP4Q99727 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.41□□□□□ -2.02
TIMP4Q99727 MIR3684-201ENST00000579779 74 ntBASIC2.41□□□□□ -2.02
TIMP4Q99727 AC090616.3-201ENST00000582184 217 ntBASIC2.41□□□□□ -2.02
TIMP4Q99727 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.41□□□□□ -2.02
TIMP4Q99727 MIR1248-201ENST00000629190 106 ntBASIC2.41□□□□□ -2.02
TIMP4Q99727 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TIMP4Q99727 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TIMP4Q99727 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TIMP4Q99727 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.4□□□□□ -2.02
TIMP4Q99727 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
TIMP4Q99727 AL356292.1-201ENST00000283110 373 ntBASIC2.4□□□□□ -2.03
TIMP4Q99727 MIR367-201ENST00000362299 68 ntBASIC2.4□□□□□ -2.03
TIMP4Q99727 SNORA27.1-201ENST00000362604 124 ntBASIC2.4□□□□□ -2.03
TIMP4Q99727 RNU6-103P-201ENST00000363686 107 ntBASIC2.4□□□□□ -2.03
TIMP4Q99727 Y_RNA.215-201ENST00000364204 112 ntBASIC2.4□□□□□ -2.03
TIMP4Q99727 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
TIMP4Q99727 RNU6-239P-201ENST00000390990 99 ntBASIC2.4□□□□□ -2.03
TIMP4Q99727 EBAG9P1-201ENST00000418955 543 ntBASIC2.4□□□□□ -2.03
TIMP4Q99727 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.4□□□□□ -2.03
TIMP4Q99727 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.4□□□□□ -2.03
TIMP4Q99727 AL121914.1-201ENST00000450188 156 ntBASIC2.4□□□□□ -2.03
TIMP4Q99727 HMGN2P18-201ENST00000450680 270 ntBASIC2.4□□□□□ -2.03
TIMP4Q99727 RNU6-221P-201ENST00000459541 99 ntBASIC2.4□□□□□ -2.03
TIMP4Q99727 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.4□□□□□ -2.03
TIMP4Q99727 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.4□□□□□ -2.03
TIMP4Q99727 RNU6-948P-201ENST00000516374 107 ntBASIC2.4□□□□□ -2.03
TIMP4Q99727 SCARNA3-201ENST00000517097 143 ntBASIC2.4□□□□□ -2.03
TIMP4Q99727 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.4□□□□□ -2.03
TIMP4Q99727 AC022616.8-201ENST00000533569 253 ntBASIC2.4□□□□□ -2.03
TIMP4Q99727 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.4□□□□□ -2.03
TIMP4Q99727 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
TIMP4Q99727 MIR4724-201ENST00000579485 89 ntBASIC2.4□□□□□ -2.03
TIMP4Q99727 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
TIMP4Q99727 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.4□□□□□ -2.03
TIMP4Q99727 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
TIMP4Q99727 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.4□□□□□ -2.03
TIMP4Q99727 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TIMP4Q99727 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.4□□□□□ -2.03
TIMP4Q99727 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.03
TIMP4Q99727 VTRNA1-1-201ENST00000363120 99 ntBASIC2.39□□□□□ -2.03
TIMP4Q99727 RNA5SP68-201ENST00000363885 119 ntBASIC2.39□□□□□ -2.03
TIMP4Q99727 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
TIMP4Q99727 RNU6-136P-201ENST00000384663 107 ntBASIC2.39□□□□□ -2.03
TIMP4Q99727 SNORA36B-201ENST00000410438 131 ntBASIC2.39□□□□□ -2.03
TIMP4Q99727 AC080013.2-201ENST00000460866 323 ntBASIC2.39□□□□□ -2.03
TIMP4Q99727 AC005840.1-201ENST00000498412 377 ntBASIC2.39□□□□□ -2.03
TIMP4Q99727 AC010598.1-201ENST00000510378 103 ntBASIC2.39□□□□□ -2.03
TIMP4Q99727 RNA5SP20-201ENST00000515976 84 ntBASIC2.39□□□□□ -2.03
TIMP4Q99727 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.39□□□□□ -2.03
TIMP4Q99727 AC109810.1-201ENST00000534066 224 ntBASIC2.39□□□□□ -2.03
TIMP4Q99727 MIR548AI-201ENST00000579940 88 ntBASIC2.39□□□□□ -2.03
TIMP4Q99727 MIR4431-201ENST00000579990 94 ntBASIC2.39□□□□□ -2.03
TIMP4Q99727 AC105245.1-201ENST00000581934 244 ntBASIC2.39□□□□□ -2.03
TIMP4Q99727 MIR3670-2-201ENST00000582974 65 ntBASIC2.39□□□□□ -2.03
TIMP4Q99727 MIR3670-1-201ENST00000584160 65 ntBASIC2.39□□□□□ -2.03
TIMP4Q99727 MIR3670-3-201ENST00000584855 65 ntBASIC2.39□□□□□ -2.03
TIMP4Q99727 MIR3670-4-201ENST00000612260 65 ntBASIC2.39□□□□□ -2.03
TIMP4Q99727 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.39□□□□□ -2.03
TIMP4Q99727 MIR548AY-201ENST00000617669 107 ntBASIC2.39□□□□□ -2.03
TIMP4Q99727 Y_RNA.778-201ENST00000620203 90 ntBASIC2.39□□□□□ -2.03
TIMP4Q99727 AC010297.1-201ENST00000623948 149 ntBASIC2.39□□□□□ -2.03
TIMP4Q99727 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
TIMP4Q99727 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
TIMP4Q99727 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TIMP4Q99727 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.38□□□□□ -2.03
TIMP4Q99727 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TIMP4Q99727 Y_RNA.229-201ENST00000364347 113 ntBASIC2.38□□□□□ -2.03
TIMP4Q99727 SNORD113-1-201ENST00000365321 69 ntBASIC2.38□□□□□ -2.03
TIMP4Q99727 RNU6-81P-201ENST00000365608 104 ntBASIC2.38□□□□□ -2.03
TIMP4Q99727 RNU6-144P-201ENST00000383951 107 ntBASIC2.38□□□□□ -2.03
TIMP4Q99727 MIR616-201ENST00000385293 97 ntBASIC2.38□□□□□ -2.03
TIMP4Q99727 MIR526A2-201ENST00000390198 65 ntBASIC2.38□□□□□ -2.03
TIMP4Q99727 RNU2-32P-201ENST00000411193 191 ntBASIC2.38□□□□□ -2.03
TIMP4Q99727 AC006461.1-201ENST00000412637 326 ntBASIC2.38□□□□□ -2.03
TIMP4Q99727 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.38□□□□□ -2.03
TIMP4Q99727 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.38□□□□□ -2.03
TIMP4Q99727 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.38□□□□□ -2.03
TIMP4Q99727 RNU6-561P-201ENST00000516222 102 ntBASIC2.38□□□□□ -2.03
TIMP4Q99727 RNU7-115P-201ENST00000516433 55 ntBASIC2.38□□□□□ -2.03
TIMP4Q99727 RNU6-426P-201ENST00000516464 97 ntBASIC2.38□□□□□ -2.03
TIMP4Q99727 RPPH1-2P-201ENST00000516688 293 ntBASIC2.38□□□□□ -2.03
TIMP4Q99727 POLR3GP1-201ENST00000594073 261 ntBASIC2.38□□□□□ -2.03
TIMP4Q99727 MIR5739-201ENST00000619803 80 ntBASIC2.38□□□□□ -2.03
TIMP4Q99727 AC080128.1-201ENST00000474389 1917 ntBASIC2.38□□□□□ -2.03
TIMP4Q99727 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TIMP4Q99727 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.37□□□□□ -2.03
TIMP4Q99727 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TIMP4Q99727 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.37□□□□□ -2.03
TIMP4Q99727 RNU6-271P-201ENST00000363858 105 ntBASIC2.37□□□□□ -2.03
TIMP4Q99727 RNU6-546P-201ENST00000383991 107 ntBASIC2.37□□□□□ -2.03
TIMP4Q99727 Y_RNA.568-201ENST00000384742 113 ntBASIC2.37□□□□□ -2.03
TIMP4Q99727 AL606845.1-201ENST00000404881 255 ntBASIC2.37□□□□□ -2.03
TIMP4Q99727 U6atac.2-201ENST00000408644 118 ntBASIC2.37□□□□□ -2.03
TIMP4Q99727 AL162725.1-201ENST00000435405 301 ntBASIC2.37□□□□□ -2.03
TIMP4Q99727 RPS26P55-201ENST00000471178 356 ntBASIC2.37□□□□□ -2.03
TIMP4Q99727 AC107027.2-201ENST00000512197 115 ntBASIC2.37□□□□□ -2.03
TIMP4Q99727 RNU6-826P-201ENST00000516827 104 ntBASIC2.37□□□□□ -2.03
TIMP4Q99727 RNA5SP490-201ENST00000517141 136 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms