Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SNORA75.5-201ENST00000391291 81 ntBASIC2.85□□□□□ -1.95
CDK5RAP1Q96SZ6 SNRPGP8-201ENST00000454064 226 ntBASIC2.85□□□□□ -1.95
CDK5RAP1Q96SZ6 AC003982.1-202ENST00000469928 248 ntBASIC2.85□□□□□ -1.95
CDK5RAP1Q96SZ6 RN7SKP132-201ENST00000516001 208 ntBASIC2.85□□□□□ -1.95
CDK5RAP1Q96SZ6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.85□□□□□ -1.95
CDK5RAP1Q96SZ6 HSPE1P18-201ENST00000517602 280 ntBASIC2.85□□□□□ -1.95
CDK5RAP1Q96SZ6 EIF4A1P12-201ENST00000551910 141 ntBASIC2.85□□□□□ -1.95
CDK5RAP1Q96SZ6 MIR4319-201ENST00000577285 85 ntBASIC2.85□□□□□ -1.95
CDK5RAP1Q96SZ6 MIR3646-201ENST00000578301 84 ntBASIC2.85□□□□□ -1.95
CDK5RAP1Q96SZ6 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.85□□□□□ -1.95
CDK5RAP1Q96SZ6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDK5RAP1Q96SZ6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDK5RAP1Q96SZ6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDK5RAP1Q96SZ6 AL161431.1-201ENST00000618966 4205 ntBASIC2.85□□□□□ -1.95
CDK5RAP1Q96SZ6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 CENPCP1-201ENST00000533085 2578 ntBASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 AC062016.1-201ENST00000355719 319 ntBASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 RNA5SP354-201ENST00000391247 136 ntBASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 AL355796.1-201ENST00000406706 323 ntBASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 SNORA36B-201ENST00000410438 131 ntBASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 CYCSP48-201ENST00000417124 323 ntBASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 MLLT10P1-201ENST00000418346 262 ntBASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 AC063976.4-201ENST00000421971 163 ntBASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 SNORD109B-201ENST00000458961 67 ntBASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 SNORD109A-201ENST00000459128 67 ntBASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 RN7SKP179-201ENST00000516126 217 ntBASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 RNU6-168P-201ENST00000516189 101 ntBASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 AC105137.2-201ENST00000569073 466 ntBASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 MIR3162-201ENST00000581818 82 ntBASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 MIR548AY-201ENST00000617669 107 ntBASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.84□□□□□ -1.95
CDK5RAP1Q96SZ6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
CDK5RAP1Q96SZ6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
CDK5RAP1Q96SZ6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.84□□□□□ -1.96
CDK5RAP1Q96SZ6 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 AC004944.1-201ENST00000517807 3059 ntBASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 Y_RNA.35-201ENST00000362601 101 ntBASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 U3.9-201ENST00000363823 204 ntBASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 Y_RNA.587-201ENST00000391210 103 ntBASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 AL365496.1-201ENST00000426885 215 ntBASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 TOMM22P2-201ENST00000430735 237 ntBASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 AL357134.1-201ENST00000445848 426 ntBASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 AC107626.1-201ENST00000471084 183 ntBASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 AC096725.1-201ENST00000514266 313 ntBASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 RNU7-115P-201ENST00000516433 55 ntBASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 RNU6-1337P-201ENST00000516525 95 ntBASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 RNU6-63P-201ENST00000516690 95 ntBASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 AC027419.1-201ENST00000522976 328 ntBASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 AC079600.2-201ENST00000550076 130 ntBASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 RPL12P50-201ENST00000603116 116 ntBASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 AC006023.1-201ENST00000603944 259 ntBASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.83□□□□□ -1.96
CDK5RAP1Q96SZ6 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDK5RAP1Q96SZ6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDK5RAP1Q96SZ6 MIR450A1-201ENST00000362262 91 ntBASIC2.82□□□□□ -1.96
CDK5RAP1Q96SZ6 RNU6-1305P-201ENST00000364353 104 ntBASIC2.82□□□□□ -1.96
CDK5RAP1Q96SZ6 RNU1-112P-201ENST00000364401 164 ntBASIC2.82□□□□□ -1.96
CDK5RAP1Q96SZ6 SNORD14D-201ENST00000384390 87 ntBASIC2.82□□□□□ -1.96
CDK5RAP1Q96SZ6 RNU6-19P-201ENST00000384718 107 ntBASIC2.82□□□□□ -1.96
CDK5RAP1Q96SZ6 MIR181A2-201ENST00000384863 110 ntBASIC2.82□□□□□ -1.96
CDK5RAP1Q96SZ6 Y_RNA.584-201ENST00000391090 114 ntBASIC2.82□□□□□ -1.96
CDK5RAP1Q96SZ6 AL139095.1-201ENST00000404326 391 ntBASIC2.82□□□□□ -1.96
CDK5RAP1Q96SZ6 MIR449C-201ENST00000516047 92 ntBASIC2.82□□□□□ -1.96
CDK5RAP1Q96SZ6 SNORA72.7-201ENST00000516349 94 ntBASIC2.82□□□□□ -1.96
CDK5RAP1Q96SZ6 RNU6-1061P-201ENST00000516530 99 ntBASIC2.82□□□□□ -1.96
CDK5RAP1Q96SZ6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.82□□□□□ -1.96
CDK5RAP1Q96SZ6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.82□□□□□ -1.96
CDK5RAP1Q96SZ6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.81□□□□□ -1.96
CDK5RAP1Q96SZ6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.81□□□□□ -1.96
CDK5RAP1Q96SZ6 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CDK5RAP1Q96SZ6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CDK5RAP1Q96SZ6 SNORD88.1-201ENST00000408684 91 ntBASIC2.81□□□□□ -1.96
CDK5RAP1Q96SZ6 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.81□□□□□ -1.96
CDK5RAP1Q96SZ6 AC112771.1-201ENST00000463581 102 ntBASIC2.81□□□□□ -1.96
CDK5RAP1Q96SZ6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.81□□□□□ -1.96
CDK5RAP1Q96SZ6 RNU6-781P-201ENST00000516377 101 ntBASIC2.81□□□□□ -1.96
CDK5RAP1Q96SZ6 RPPH1-2P-201ENST00000516688 293 ntBASIC2.81□□□□□ -1.96
CDK5RAP1Q96SZ6 RNU2-60P-201ENST00000517290 128 ntBASIC2.81□□□□□ -1.96
CDK5RAP1Q96SZ6 AC090142.3-201ENST00000519012 385 ntBASIC2.81□□□□□ -1.96
CDK5RAP1Q96SZ6 AC133485.4-201ENST00000561835 220 ntBASIC2.81□□□□□ -1.96
CDK5RAP1Q96SZ6 AC138907.4-201ENST00000570107 226 ntBASIC2.81□□□□□ -1.96
CDK5RAP1Q96SZ6 AC006254.2-201ENST00000603259 279 ntBASIC2.81□□□□□ -1.96
CDK5RAP1Q96SZ6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.81□□□□□ -1.96
CDK5RAP1Q96SZ6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CDK5RAP1Q96SZ6 AL356292.1-201ENST00000283110 373 ntBASIC2.8□□□□□ -1.96
CDK5RAP1Q96SZ6 Y_RNA.114-201ENST00000363265 113 ntBASIC2.8□□□□□ -1.96
CDK5RAP1Q96SZ6 Y_RNA.280-201ENST00000364765 112 ntBASIC2.8□□□□□ -1.96
CDK5RAP1Q96SZ6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms