Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 MTCYBP8-201ENST00000422855 651 ntBASIC-0.18□□□□□ -2.44
LYSMD1Q96S90 MTND1P4-201ENST00000435196 415 ntBASIC-0.18□□□□□ -2.44
LYSMD1Q96S90 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
LYSMD1Q96S90 SNORD123-201ENST00000459473 70 ntBASIC-0.18□□□□□ -2.44
LYSMD1Q96S90 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.18□□□□□ -2.44
LYSMD1Q96S90 MIR2115-201ENST00000516657 100 ntBASIC-0.18□□□□□ -2.44
LYSMD1Q96S90 UBL5P4-201ENST00000562584 236 ntBASIC-0.18□□□□□ -2.44
LYSMD1Q96S90 MIR4290-201ENST00000583807 95 ntBASIC-0.18□□□□□ -2.44
LYSMD1Q96S90 MIR8076-201ENST00000611401 83 ntBASIC-0.18□□□□□ -2.44
LYSMD1Q96S90 AC016597.2-201ENST00000613256 341 ntBASIC-0.18□□□□□ -2.44
LYSMD1Q96S90 AC090517.2-201ENST00000614966 680 ntBASIC-0.18□□□□□ -2.44
LYSMD1Q96S90 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.18□□□□□ -2.44
LYSMD1Q96S90 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.18□□□□□ -2.44
LYSMD1Q96S90 SNORD113-6-201ENST00000363345 75 ntBASIC-0.19□□□□□ -2.44
LYSMD1Q96S90 SNORA32.1-201ENST00000364514 115 ntBASIC-0.19□□□□□ -2.44
LYSMD1Q96S90 RNU6-934P-201ENST00000365154 107 ntBASIC-0.19□□□□□ -2.44
LYSMD1Q96S90 RNU6-784P-201ENST00000384330 106 ntBASIC-0.19□□□□□ -2.44
LYSMD1Q96S90 SNORA75.6-201ENST00000391318 127 ntBASIC-0.19□□□□□ -2.44
LYSMD1Q96S90 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.19□□□□□ -2.44
LYSMD1Q96S90 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.19□□□□□ -2.44
LYSMD1Q96S90 BX295541.1-201ENST00000417774 250 ntBASIC-0.19□□□□□ -2.44
LYSMD1Q96S90 AL590632.1-201ENST00000424289 371 ntBASIC-0.19□□□□□ -2.44
LYSMD1Q96S90 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.19□□□□□ -2.44
LYSMD1Q96S90 HMGN1P10-201ENST00000474557 553 ntBASIC-0.19□□□□□ -2.44
LYSMD1Q96S90 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.19□□□□□ -2.44
LYSMD1Q96S90 CCDC34P1-201ENST00000507441 517 ntBASIC-0.19□□□□□ -2.44
LYSMD1Q96S90 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.19□□□□□ -2.44
LYSMD1Q96S90 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.19□□□□□ -2.44
LYSMD1Q96S90 AL357078.3-201ENST00000607528 618 ntBASIC-0.19□□□□□ -2.44
LYSMD1Q96S90 HULC.1-201ENST00000612720 240 ntBASIC-0.19□□□□□ -2.44
LYSMD1Q96S90 AC098679.4-201ENST00000624241 654 ntBASIC-0.19□□□□□ -2.44
LYSMD1Q96S90 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.2□□□□□ -2.44
LYSMD1Q96S90 SNORD115-8-201ENST00000363856 82 ntBASIC-0.2□□□□□ -2.44
LYSMD1Q96S90 SNORD115-38-201ENST00000365037 82 ntBASIC-0.2□□□□□ -2.44
LYSMD1Q96S90 MIR15B-201ENST00000385045 98 ntBASIC-0.2□□□□□ -2.44
LYSMD1Q96S90 RNU6-205P-201ENST00000390858 107 ntBASIC-0.2□□□□□ -2.44
LYSMD1Q96S90 SNORA40.3-201ENST00000390964 122 ntBASIC-0.2□□□□□ -2.44
LYSMD1Q96S90 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.2□□□□□ -2.44
LYSMD1Q96S90 UBE2V1P12-201ENST00000503954 474 ntBASIC-0.2□□□□□ -2.44
LYSMD1Q96S90 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.2□□□□□ -2.44
LYSMD1Q96S90 RNU7-129P-201ENST00000516128 62 ntBASIC-0.2□□□□□ -2.44
LYSMD1Q96S90 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.2□□□□□ -2.44
LYSMD1Q96S90 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.2□□□□□ -2.44
LYSMD1Q96S90 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.2□□□□□ -2.44
LYSMD1Q96S90 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.2□□□□□ -2.44
LYSMD1Q96S90 AC006504.8-201ENST00000621046 635 ntBASIC-0.2□□□□□ -2.44
LYSMD1Q96S90 RNU6V-201ENST00000384105 107 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 RNU6-517P-201ENST00000384362 110 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 MIR625-201ENST00000385047 85 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 MIR643-201ENST00000385267 97 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 AC133104.1-201ENST00000429100 218 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 MTND4P32-201ENST00000437189 1237 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 MTND1P26-201ENST00000440488 538 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 RNU7-180P-201ENST00000459240 63 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 RNU6-63P-201ENST00000516690 95 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 SNORA18.6-201ENST00000516792 115 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 MTND4P7-201ENST00000523876 130 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 AP003461.1-201ENST00000528866 78 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 MIR3678-201ENST00000578455 94 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 MIR4804-201ENST00000581683 73 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 AC245014.2-201ENST00000603689 287 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 AC246785.4-201ENST00000605374 287 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 AL136370.1-201ENST00000608166 691 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 AL591926.4-201ENST00000616895 298 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 AL158209.2-201ENST00000619266 216 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 AC009161.2-201ENST00000624626 138 ntBASIC-0.21□□□□□ -2.44
LYSMD1Q96S90 SNORA9.1-201ENST00000362412 131 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 SNORA27.1-201ENST00000362604 124 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 RNU6-181P-201ENST00000363225 107 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 MIR593-201ENST00000384856 100 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 MIR153-2-201ENST00000385225 87 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 PCNPP3-201ENST00000393579 471 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 AL606923.1-201ENST00000406616 190 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 AL137792.2-201ENST00000443484 235 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 RNU6-445P-201ENST00000516949 107 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 AL358944.1-201ENST00000528537 144 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 AL157687.1-201ENST00000554853 619 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 MIR4676-201ENST00000583078 72 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 AL391834.2-201ENST00000609982 546 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 AL121757.2-201ENST00000611223 313 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 AP001506.1-201ENST00000615444 211 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 AC009248.2-201ENST00000619826 254 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 AC127459.3-201ENST00000624328 466 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 AC010608.3-201ENST00000625048 527 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 AC068137.4-201ENST00000638485 296 ntBASIC-0.22□□□□□ -2.44
LYSMD1Q96S90 RNA5SP325-201ENST00000363756 130 ntBASIC-0.23□□□□□ -2.45
LYSMD1Q96S90 RNU6-396P-201ENST00000365369 105 ntBASIC-0.23□□□□□ -2.45
LYSMD1Q96S90 MIR570-201ENST00000384917 97 ntBASIC-0.23□□□□□ -2.45
LYSMD1Q96S90 MIR610-201ENST00000385139 96 ntBASIC-0.23□□□□□ -2.45
LYSMD1Q96S90 RNA5SP496-201ENST00000391240 109 ntBASIC-0.23□□□□□ -2.45
LYSMD1Q96S90 MLLT10P1-201ENST00000418346 262 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms