Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 AC019176.2-201ENST00000611579 315 ntBASIC3.1□□□□□ -1.91
CITED4Q96RK1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CITED4Q96RK1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CITED4Q96RK1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CITED4Q96RK1 MIR208A-201ENST00000362287 71 ntBASIC3.09□□□□□ -1.91
CITED4Q96RK1 SNORA71.3-201ENST00000362582 128 ntBASIC3.09□□□□□ -1.91
CITED4Q96RK1 RNU6-525P-201ENST00000363685 104 ntBASIC3.09□□□□□ -1.91
CITED4Q96RK1 Y_RNA.261-201ENST00000364631 102 ntBASIC3.09□□□□□ -1.91
CITED4Q96RK1 Y_RNA.333-201ENST00000365274 102 ntBASIC3.09□□□□□ -1.91
CITED4Q96RK1 SNORD18B-201ENST00000365659 72 ntBASIC3.09□□□□□ -1.91
CITED4Q96RK1 SNORD72-201ENST00000390994 80 ntBASIC3.09□□□□□ -1.91
CITED4Q96RK1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CITED4Q96RK1 AC245047.3-201ENST00000429428 127 ntBASIC3.09□□□□□ -1.91
CITED4Q96RK1 RPS29P7-201ENST00000439662 171 ntBASIC3.09□□□□□ -1.91
CITED4Q96RK1 RNA5SP246-201ENST00000458909 119 ntBASIC3.09□□□□□ -1.91
CITED4Q96RK1 RNU6-1333P-201ENST00000516162 93 ntBASIC3.09□□□□□ -1.91
CITED4Q96RK1 RNU1-104P-201ENST00000517280 175 ntBASIC3.09□□□□□ -1.91
CITED4Q96RK1 MIR4658-201ENST00000584344 65 ntBASIC3.09□□□□□ -1.91
CITED4Q96RK1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.09□□□□□ -1.91
CITED4Q96RK1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CITED4Q96RK1 AC008264.2-201ENST00000610193 3731 ntBASIC3.09□□□□□ -1.92
CITED4Q96RK1 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.08□□□□□ -1.92
CITED4Q96RK1 FAM35CP-201ENST00000554755 2470 ntBASIC3.08□□□□□ -1.92
CITED4Q96RK1 Y_RNA.218-201ENST00000364218 104 ntBASIC3.08□□□□□ -1.92
CITED4Q96RK1 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.08□□□□□ -1.92
CITED4Q96RK1 Y_RNA.251-201ENST00000364551 99 ntBASIC3.08□□□□□ -1.92
CITED4Q96RK1 RNA5SP109-201ENST00000391010 116 ntBASIC3.08□□□□□ -1.92
CITED4Q96RK1 RN7SKP123-201ENST00000410732 291 ntBASIC3.08□□□□□ -1.92
CITED4Q96RK1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.08□□□□□ -1.92
CITED4Q96RK1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.08□□□□□ -1.92
CITED4Q96RK1 RNU5E-3P-201ENST00000515913 68 ntBASIC3.08□□□□□ -1.92
CITED4Q96RK1 RPPH1-2P-201ENST00000516688 293 ntBASIC3.08□□□□□ -1.92
CITED4Q96RK1 AC245166.1-201ENST00000521012 253 ntBASIC3.08□□□□□ -1.92
CITED4Q96RK1 AC104027.1-201ENST00000521887 300 ntBASIC3.08□□□□□ -1.92
CITED4Q96RK1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
CITED4Q96RK1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.08□□□□□ -1.92
CITED4Q96RK1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.08□□□□□ -1.92
CITED4Q96RK1 AC005786.1-201ENST00000588553 154 ntBASIC3.08□□□□□ -1.92
CITED4Q96RK1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.08□□□□□ -1.92
CITED4Q96RK1 AP001340.1-201ENST00000624405 217 ntBASIC3.08□□□□□ -1.92
CITED4Q96RK1 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CITED4Q96RK1 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CITED4Q96RK1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CITED4Q96RK1 MFSD8-233ENST00000641482 4860 ntBASIC3.07□□□□□ -1.92
CITED4Q96RK1 MIR7-3-201ENST00000384898 110 ntBASIC3.07□□□□□ -1.92
CITED4Q96RK1 MIR597-201ENST00000384968 97 ntBASIC3.07□□□□□ -1.92
CITED4Q96RK1 RN7SKP156-201ENST00000410308 342 ntBASIC3.07□□□□□ -1.92
CITED4Q96RK1 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.07□□□□□ -1.92
CITED4Q96RK1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.07□□□□□ -1.92
CITED4Q96RK1 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.07□□□□□ -1.92
CITED4Q96RK1 RPL23AP46-201ENST00000438548 490 ntBASIC3.07□□□□□ -1.92
CITED4Q96RK1 AC006011.1-201ENST00000442758 349 ntBASIC3.07□□□□□ -1.92
CITED4Q96RK1 RN7SL297P-201ENST00000483161 293 ntBASIC3.07□□□□□ -1.92
CITED4Q96RK1 RNU6-1270P-201ENST00000517128 108 ntBASIC3.07□□□□□ -1.92
CITED4Q96RK1 MIR5094-201ENST00000578766 85 ntBASIC3.07□□□□□ -1.92
CITED4Q96RK1 MIR5685-201ENST00000579080 79 ntBASIC3.07□□□□□ -1.92
CITED4Q96RK1 AL359881.1-201ENST00000602916 267 ntBASIC3.07□□□□□ -1.92
CITED4Q96RK1 U7.2-201ENST00000607576 63 ntBASIC3.07□□□□□ -1.92
CITED4Q96RK1 MIR7151-201ENST00000617477 60 ntBASIC3.07□□□□□ -1.92
CITED4Q96RK1 AC039056.2-201ENST00000622261 511 ntBASIC3.07□□□□□ -1.92
CITED4Q96RK1 CTSLP2-204ENST00000629029 392 ntBASIC3.07□□□□□ -1.92
CITED4Q96RK1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.07□□□□□ -1.92
CITED4Q96RK1 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.07□□□□□ -1.92
CITED4Q96RK1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CITED4Q96RK1 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CITED4Q96RK1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CITED4Q96RK1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CITED4Q96RK1 SNORA63.1-201ENST00000362493 131 ntBASIC3.06□□□□□ -1.92
CITED4Q96RK1 MIR522-201ENST00000385071 87 ntBASIC3.06□□□□□ -1.92
CITED4Q96RK1 PRSS3P4-201ENST00000453323 162 ntBASIC3.06□□□□□ -1.92
CITED4Q96RK1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.06□□□□□ -1.92
CITED4Q96RK1 Y_RNA.666-201ENST00000516187 112 ntBASIC3.06□□□□□ -1.92
CITED4Q96RK1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CITED4Q96RK1 AC025627.2-201ENST00000576220 160 ntBASIC3.06□□□□□ -1.92
CITED4Q96RK1 AC008507.4-201ENST00000585464 127 ntBASIC3.06□□□□□ -1.92
CITED4Q96RK1 AC097639.2-201ENST00000603159 172 ntBASIC3.06□□□□□ -1.92
CITED4Q96RK1 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CITED4Q96RK1 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CITED4Q96RK1 U8.1-201ENST00000362843 134 ntBASIC3.05□□□□□ -1.92
CITED4Q96RK1 Y_RNA.127-201ENST00000363386 109 ntBASIC3.05□□□□□ -1.92
CITED4Q96RK1 Y_RNA.242-201ENST00000364473 110 ntBASIC3.05□□□□□ -1.92
CITED4Q96RK1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.05□□□□□ -1.92
CITED4Q96RK1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.05□□□□□ -1.92
CITED4Q96RK1 FTH1P12-201ENST00000432137 551 ntBASIC3.05□□□□□ -1.92
CITED4Q96RK1 AL606517.2-201ENST00000442855 241 ntBASIC3.05□□□□□ -1.92
CITED4Q96RK1 RNU4-57P-201ENST00000515980 135 ntBASIC3.05□□□□□ -1.92
CITED4Q96RK1 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.05□□□□□ -1.92
CITED4Q96RK1 Y_RNA.757-201ENST00000578934 114 ntBASIC3.05□□□□□ -1.92
CITED4Q96RK1 MIR3129-201ENST00000581095 76 ntBASIC3.05□□□□□ -1.92
CITED4Q96RK1 AC131055.1-201ENST00000584626 316 ntBASIC3.05□□□□□ -1.92
CITED4Q96RK1 AC069114.2-201ENST00000604699 304 ntBASIC3.05□□□□□ -1.92
CITED4Q96RK1 AL137849.1-201ENST00000604767 169 ntBASIC3.05□□□□□ -1.92
CITED4Q96RK1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.05□□□□□ -1.92
CITED4Q96RK1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.05□□□□□ -1.92
CITED4Q96RK1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CITED4Q96RK1 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CITED4Q96RK1 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.05□□□□□ -1.92
CITED4Q96RK1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CITED4Q96RK1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CITED4Q96RK1 SNORD116-14-201ENST00000383894 92 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms