Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MIR4738-201ENST00000579134 87 ntBASIC4.03□□□□□ -1.76
TRIM47Q96LD4 U6.73-201ENST00000619194 103 ntBASIC4.03□□□□□ -1.76
TRIM47Q96LD4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM47Q96LD4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.77
TRIM47Q96LD4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM47Q96LD4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM47Q96LD4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM47Q96LD4 MIR423-201ENST00000362201 94 ntBASIC4.02□□□□□ -1.77
TRIM47Q96LD4 RNU6-888P-201ENST00000363010 101 ntBASIC4.02□□□□□ -1.77
TRIM47Q96LD4 RNU6-529P-201ENST00000363383 104 ntBASIC4.02□□□□□ -1.77
TRIM47Q96LD4 U8.17-201ENST00000391292 132 ntBASIC4.02□□□□□ -1.77
TRIM47Q96LD4 RHEBP3-201ENST00000411920 351 ntBASIC4.02□□□□□ -1.77
TRIM47Q96LD4 RNU7-164P-201ENST00000459221 62 ntBASIC4.02□□□□□ -1.77
TRIM47Q96LD4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM47Q96LD4 RPS29P20-201ENST00000489592 171 ntBASIC4.02□□□□□ -1.77
TRIM47Q96LD4 HSPE1P18-201ENST00000517602 280 ntBASIC4.02□□□□□ -1.77
TRIM47Q96LD4 AC021739.1-201ENST00000559631 174 ntBASIC4.02□□□□□ -1.77
TRIM47Q96LD4 MIR4668-201ENST00000582284 70 ntBASIC4.02□□□□□ -1.77
TRIM47Q96LD4 AC091152.3-201ENST00000604227 325 ntBASIC4.02□□□□□ -1.77
TRIM47Q96LD4 AP003355.3-201ENST00000623465 114 ntBASIC4.02□□□□□ -1.77
TRIM47Q96LD4 MIR376A2-201ENST00000636782 80 ntBASIC4.02□□□□□ -1.77
TRIM47Q96LD4 AC007656.2-201ENST00000624902 4547 ntBASIC4.02□□□□□ -1.77
TRIM47Q96LD4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM47Q96LD4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM47Q96LD4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
TRIM47Q96LD4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM47Q96LD4 SNORA51.4-201ENST00000364993 124 ntBASIC4.01□□□□□ -1.77
TRIM47Q96LD4 RNU6-117P-201ENST00000365415 107 ntBASIC4.01□□□□□ -1.77
TRIM47Q96LD4 RNU6-1197P-201ENST00000391183 107 ntBASIC4.01□□□□□ -1.77
TRIM47Q96LD4 HSPE1P26-201ENST00000405341 275 ntBASIC4.01□□□□□ -1.77
TRIM47Q96LD4 AC063976.3-201ENST00000426849 329 ntBASIC4.01□□□□□ -1.77
TRIM47Q96LD4 RNU2-11P-201ENST00000459191 187 ntBASIC4.01□□□□□ -1.77
TRIM47Q96LD4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM47Q96LD4 NDUFA4P2-201ENST00000489989 244 ntBASIC4.01□□□□□ -1.77
TRIM47Q96LD4 HMGB1P22-201ENST00000505315 124 ntBASIC4.01□□□□□ -1.77
TRIM47Q96LD4 RNU7-123P-201ENST00000515911 60 ntBASIC4.01□□□□□ -1.77
TRIM47Q96LD4 RNA5SP341-201ENST00000516261 117 ntBASIC4.01□□□□□ -1.77
TRIM47Q96LD4 RNU6-1282P-201ENST00000516735 96 ntBASIC4.01□□□□□ -1.77
TRIM47Q96LD4 MIR4694-201ENST00000578534 80 ntBASIC4.01□□□□□ -1.77
TRIM47Q96LD4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM47Q96LD4 JPX_2.1-201ENST00000614161 69 ntBASIC4.01□□□□□ -1.77
TRIM47Q96LD4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM47Q96LD4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM47Q96LD4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM47Q96LD4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM47Q96LD4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM47Q96LD4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
TRIM47Q96LD4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM47Q96LD4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
TRIM47Q96LD4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM47Q96LD4 Y_RNA.4-201ENST00000362333 112 ntBASIC4□□□□□ -1.77
TRIM47Q96LD4 RNU6-349P-201ENST00000362402 107 ntBASIC4□□□□□ -1.77
TRIM47Q96LD4 Y_RNA.94-201ENST00000363068 106 ntBASIC4□□□□□ -1.77
TRIM47Q96LD4 RNU6-832P-201ENST00000363319 107 ntBASIC4□□□□□ -1.77
TRIM47Q96LD4 RNA5SP42-201ENST00000364278 115 ntBASIC4□□□□□ -1.77
TRIM47Q96LD4 RNU6-60P-201ENST00000364792 103 ntBASIC4□□□□□ -1.77
TRIM47Q96LD4 SNORD24-201ENST00000383884 75 ntBASIC4□□□□□ -1.77
TRIM47Q96LD4 Y_RNA.454-201ENST00000384224 113 ntBASIC4□□□□□ -1.77
TRIM47Q96LD4 SNORD14D-201ENST00000384390 87 ntBASIC4□□□□□ -1.77
TRIM47Q96LD4 TOMM22P1-201ENST00000418578 312 ntBASIC4□□□□□ -1.77
TRIM47Q96LD4 VDAC1P3-201ENST00000434069 851 ntBASIC4□□□□□ -1.77
TRIM47Q96LD4 RPS4XP11-201ENST00000446897 772 ntBASIC4□□□□□ -1.77
TRIM47Q96LD4 snoU13.4-201ENST00000458916 104 ntBASIC4□□□□□ -1.77
TRIM47Q96LD4 AC113410.1-201ENST00000505029 247 ntBASIC4□□□□□ -1.77
TRIM47Q96LD4 MRPS17P9-201ENST00000511924 393 ntBASIC4□□□□□ -1.77
TRIM47Q96LD4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4□□□□□ -1.77
TRIM47Q96LD4 MIR5197-201ENST00000583721 112 ntBASIC4□□□□□ -1.77
TRIM47Q96LD4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4□□□□□ -1.77
TRIM47Q96LD4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM47Q96LD4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM47Q96LD4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM47Q96LD4 Y_RNA.507-201ENST00000384500 99 ntBASIC3.99□□□□□ -1.77
TRIM47Q96LD4 MIR577-201ENST00000385196 96 ntBASIC3.99□□□□□ -1.77
TRIM47Q96LD4 AL133475.1-201ENST00000404414 305 ntBASIC3.99□□□□□ -1.77
TRIM47Q96LD4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM47Q96LD4 RNU7-57P-201ENST00000459540 60 ntBASIC3.99□□□□□ -1.77
TRIM47Q96LD4 RNU7-6P-201ENST00000516845 62 ntBASIC3.99□□□□□ -1.77
TRIM47Q96LD4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.99□□□□□ -1.77
TRIM47Q96LD4 MIR4777-201ENST00000583710 86 ntBASIC3.99□□□□□ -1.77
TRIM47Q96LD4 AL033523.1-201ENST00000605153 153 ntBASIC3.99□□□□□ -1.77
TRIM47Q96LD4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM47Q96LD4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM47Q96LD4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM47Q96LD4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM47Q96LD4 Z83843.1-201ENST00000604070 3685 ntBASIC3.99□□□□□ -1.77
TRIM47Q96LD4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM47Q96LD4 Y_RNA.96-201ENST00000363092 109 ntBASIC3.98□□□□□ -1.77
TRIM47Q96LD4 RNU6-301P-201ENST00000384277 107 ntBASIC3.98□□□□□ -1.77
TRIM47Q96LD4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM47Q96LD4 HMGN2P7-201ENST00000456186 273 ntBASIC3.98□□□□□ -1.77
TRIM47Q96LD4 AC084357.1-201ENST00000473404 255 ntBASIC3.98□□□□□ -1.77
TRIM47Q96LD4 AC012531.5-201ENST00000611375 151 ntBASIC3.98□□□□□ -1.77
TRIM47Q96LD4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
TRIM47Q96LD4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM47Q96LD4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM47Q96LD4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM47Q96LD4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
TRIM47Q96LD4 AC010889.1-201ENST00000566193 2666 ntBASIC3.97□□□□□ -1.77
TRIM47Q96LD4 RNU6-1229P-201ENST00000364295 107 ntBASIC3.97□□□□□ -1.77
TRIM47Q96LD4 Y_RNA.316-201ENST00000365118 111 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms