Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC006380.1-201ENST00000603598 186 ntBASIC2.33□□□□□ -2.04
SNX27Q96L92 AC011373.1-201ENST00000607270 237 ntBASIC2.33□□□□□ -2.04
SNX27Q96L92 MIR376A1-201ENST00000616574 68 ntBASIC2.33□□□□□ -2.04
SNX27Q96L92 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.33□□□□□ -2.04
SNX27Q96L92 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
SNX27Q96L92 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SNX27Q96L92 AC068700.1-201ENST00000565862 3754 ntBASIC2.33□□□□□ -2.04
SNX27Q96L92 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SNX27Q96L92 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SNX27Q96L92 Y_RNA.105-201ENST00000363182 111 ntBASIC2.32□□□□□ -2.04
SNX27Q96L92 Y_RNA.327-201ENST00000365201 102 ntBASIC2.32□□□□□ -2.04
SNX27Q96L92 Y_RNA.446-201ENST00000384178 104 ntBASIC2.32□□□□□ -2.04
SNX27Q96L92 SNORA48.3-201ENST00000391081 134 ntBASIC2.32□□□□□ -2.04
SNX27Q96L92 MIR1253-201ENST00000408273 105 ntBASIC2.32□□□□□ -2.04
SNX27Q96L92 AC016909.1-201ENST00000415916 166 ntBASIC2.32□□□□□ -2.04
SNX27Q96L92 AL390729.2-201ENST00000416137 156 ntBASIC2.32□□□□□ -2.04
SNX27Q96L92 AC011406.1-201ENST00000512440 370 ntBASIC2.32□□□□□ -2.04
SNX27Q96L92 RNU6-1041P-201ENST00000516254 102 ntBASIC2.32□□□□□ -2.04
SNX27Q96L92 RNU6-635P-201ENST00000516651 102 ntBASIC2.32□□□□□ -2.04
SNX27Q96L92 SNORA31.25-201ENST00000517242 134 ntBASIC2.32□□□□□ -2.04
SNX27Q96L92 AC008269.2-201ENST00000561915 1105 ntBASIC2.32□□□□□ -2.04
SNX27Q96L92 MIR4300-201ENST00000581016 96 ntBASIC2.32□□□□□ -2.04
SNX27Q96L92 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SNX27Q96L92 RNU6-238P-201ENST00000363313 106 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 RNU6-806P-201ENST00000365147 105 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 RNU4-52P-201ENST00000384209 138 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 SNORA67.3-201ENST00000384366 140 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 MIR597-201ENST00000384968 97 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 RNU6-1109P-201ENST00000391187 107 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 AL355497.1-201ENST00000406262 551 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 MIR1283-2-201ENST00000408621 87 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 RNU2-54P-201ENST00000410299 190 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
SNX27Q96L92 LINC01399-202ENST00000458450 244 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 SNORD65B-201ENST00000459126 73 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 RNU6-1143P-201ENST00000516125 104 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 RNU6-155P-201ENST00000516347 100 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.31□□□□□ -2.04
SNX27Q96L92 AL117187.1-201ENST00000555482 181 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.31□□□□□ -2.04
SNX27Q96L92 AC022441.3-201ENST00000605737 136 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 U2.15-201ENST00000611544 191 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 U2.16-201ENST00000613119 191 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 U2.12-201ENST00000613778 191 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 U2.20-201ENST00000613956 192 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 U2.9-201ENST00000615427 191 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 U2.11-201ENST00000616345 191 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 U2.2-201ENST00000616535 191 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 U2.3-201ENST00000617785 191 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 U2.19-201ENST00000618602 191 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 RNU2-1-201ENST00000618664 191 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 U2.6-201ENST00000619225 191 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 U2.5-201ENST00000619465 191 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 U2.10-201ENST00000620268 191 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 U6.115-201ENST00000636045 103 ntBASIC2.31□□□□□ -2.04
SNX27Q96L92 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
SNX27Q96L92 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SNX27Q96L92 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SNX27Q96L92 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SNX27Q96L92 Y_RNA.26-201ENST00000362539 101 ntBASIC2.3□□□□□ -2.04
SNX27Q96L92 Y_RNA.64-201ENST00000362845 102 ntBASIC2.3□□□□□ -2.04
SNX27Q96L92 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.3□□□□□ -2.04
SNX27Q96L92 Y_RNA.393-201ENST00000383936 102 ntBASIC2.3□□□□□ -2.04
SNX27Q96L92 RNU6-21P-201ENST00000384710 107 ntBASIC2.3□□□□□ -2.04
SNX27Q96L92 SNORD115-46-201ENST00000390982 71 ntBASIC2.3□□□□□ -2.04
SNX27Q96L92 U3.40-201ENST00000408706 208 ntBASIC2.3□□□□□ -2.04
SNX27Q96L92 RNU4-30P-201ENST00000410245 143 ntBASIC2.3□□□□□ -2.04
SNX27Q96L92 RNU6-121P-201ENST00000410525 99 ntBASIC2.3□□□□□ -2.04
SNX27Q96L92 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
SNX27Q96L92 AL353689.1-201ENST00000438895 199 ntBASIC2.3□□□□□ -2.04
SNX27Q96L92 DYNLT3P2-201ENST00000442517 295 ntBASIC2.3□□□□□ -2.04
SNX27Q96L92 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SNX27Q96L92 RNU2-12P-201ENST00000517216 168 ntBASIC2.3□□□□□ -2.04
SNX27Q96L92 SUMO2P18-201ENST00000518873 252 ntBASIC2.3□□□□□ -2.04
SNX27Q96L92 AC027419.1-201ENST00000522976 328 ntBASIC2.3□□□□□ -2.04
SNX27Q96L92 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.3□□□□□ -2.04
SNX27Q96L92 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.3□□□□□ -2.04
SNX27Q96L92 MIR3684-201ENST00000579779 74 ntBASIC2.3□□□□□ -2.04
SNX27Q96L92 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.3□□□□□ -2.04
SNX27Q96L92 AC008749.1-201ENST00000597650 306 ntBASIC2.3□□□□□ -2.04
SNX27Q96L92 AP000553.5-201ENST00000641933 54 ntBASIC2.3□□□□□ -2.04
SNX27Q96L92 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SNX27Q96L92 RNU6-1309P-201ENST00000363305 108 ntBASIC2.29□□□□□ -2.04
SNX27Q96L92 SNORD113-8-201ENST00000363497 74 ntBASIC2.29□□□□□ -2.04
SNX27Q96L92 Y_RNA.331-201ENST00000365267 102 ntBASIC2.29□□□□□ -2.04
SNX27Q96L92 SNORD114-22-201ENST00000365423 72 ntBASIC2.29□□□□□ -2.04
SNX27Q96L92 RNA5SP465-201ENST00000391195 109 ntBASIC2.29□□□□□ -2.04
SNX27Q96L92 SNORD23.1-201ENST00000408212 104 ntBASIC2.29□□□□□ -2.04
SNX27Q96L92 MIR548F4-201ENST00000408515 105 ntBASIC2.29□□□□□ -2.04
SNX27Q96L92 Y_RNA.602-201ENST00000410535 92 ntBASIC2.29□□□□□ -2.04
SNX27Q96L92 AL358176.2-201ENST00000425769 204 ntBASIC2.29□□□□□ -2.04
SNX27Q96L92 HMGN2P34-201ENST00000437647 269 ntBASIC2.29□□□□□ -2.04
SNX27Q96L92 AL731563.1-201ENST00000442202 214 ntBASIC2.29□□□□□ -2.04
SNX27Q96L92 AC005042.3-201ENST00000453230 174 ntBASIC2.29□□□□□ -2.04
SNX27Q96L92 AC098869.1-201ENST00000481627 292 ntBASIC2.29□□□□□ -2.04
SNX27Q96L92 AC010598.1-201ENST00000510378 103 ntBASIC2.29□□□□□ -2.04
SNX27Q96L92 RNU6-1146P-201ENST00000516282 102 ntBASIC2.29□□□□□ -2.04
SNX27Q96L92 RNU6-966P-201ENST00000516479 104 ntBASIC2.29□□□□□ -2.04
SNX27Q96L92 DNAJC19P9-201ENST00000555084 351 ntBASIC2.29□□□□□ -2.04
SNX27Q96L92 MIR4529-201ENST00000578110 78 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 359.9 ms