Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.36□□□□□ -2.19
RPGRIP1Q96KN7 SNORA31.10-201ENST00000516482 106 ntBASIC1.36□□□□□ -2.19
RPGRIP1Q96KN7 RNU6-307P-201ENST00000516743 106 ntBASIC1.36□□□□□ -2.19
RPGRIP1Q96KN7 AC022868.1-201ENST00000517767 391 ntBASIC1.36□□□□□ -2.19
RPGRIP1Q96KN7 CYCSP23-201ENST00000519781 313 ntBASIC1.36□□□□□ -2.19
RPGRIP1Q96KN7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.36□□□□□ -2.19
RPGRIP1Q96KN7 AC023157.2-201ENST00000540596 141 ntBASIC1.36□□□□□ -2.19
RPGRIP1Q96KN7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.36□□□□□ -2.19
RPGRIP1Q96KN7 MIR4438-201ENST00000585271 93 ntBASIC1.36□□□□□ -2.19
RPGRIP1Q96KN7 MIR1244-1-201ENST00000612829 85 ntBASIC1.36□□□□□ -2.19
RPGRIP1Q96KN7 MIR1244-3-201ENST00000635744 85 ntBASIC1.36□□□□□ -2.19
RPGRIP1Q96KN7 MIR1244-2-201ENST00000636449 85 ntBASIC1.36□□□□□ -2.19
RPGRIP1Q96KN7 MIR1244-4-202ENST00000636813 85 ntBASIC1.36□□□□□ -2.19
RPGRIP1Q96KN7 RNU6-99P-201ENST00000364721 107 ntBASIC1.35□□□□□ -2.19
RPGRIP1Q96KN7 RNU6-1264P-201ENST00000383891 107 ntBASIC1.35□□□□□ -2.19
RPGRIP1Q96KN7 MRPL35P1-201ENST00000404272 572 ntBASIC1.35□□□□□ -2.19
RPGRIP1Q96KN7 RNU6-370P-201ENST00000411008 104 ntBASIC1.35□□□□□ -2.19
RPGRIP1Q96KN7 UBE2V1P7-201ENST00000446395 340 ntBASIC1.35□□□□□ -2.19
RPGRIP1Q96KN7 MRPS10P1-201ENST00000448483 130 ntBASIC1.35□□□□□ -2.19
RPGRIP1Q96KN7 RPL31P58-201ENST00000469001 379 ntBASIC1.35□□□□□ -2.19
RPGRIP1Q96KN7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.35□□□□□ -2.19
RPGRIP1Q96KN7 MIR3937-201ENST00000580135 106 ntBASIC1.35□□□□□ -2.19
RPGRIP1Q96KN7 MIR3660-201ENST00000584845 100 ntBASIC1.35□□□□□ -2.19
RPGRIP1Q96KN7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.35□□□□□ -2.19
RPGRIP1Q96KN7 AC021506.2-201ENST00000612354 169 ntBASIC1.35□□□□□ -2.19
RPGRIP1Q96KN7 AC104260.1-201ENST00000616660 539 ntBASIC1.35□□□□□ -2.19
RPGRIP1Q96KN7 SNORD33-201ENST00000362761 85 ntBASIC1.34□□□□□ -2.19
RPGRIP1Q96KN7 RNU6-318P-201ENST00000384283 103 ntBASIC1.34□□□□□ -2.19
RPGRIP1Q96KN7 RNU6-1031P-201ENST00000384773 107 ntBASIC1.34□□□□□ -2.19
RPGRIP1Q96KN7 AC245047.3-201ENST00000429428 127 ntBASIC1.34□□□□□ -2.19
RPGRIP1Q96KN7 PCNPP5-201ENST00000452246 481 ntBASIC1.34□□□□□ -2.19
RPGRIP1Q96KN7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.34□□□□□ -2.19
RPGRIP1Q96KN7 RPS27P22-201ENST00000478056 241 ntBASIC1.34□□□□□ -2.19
RPGRIP1Q96KN7 AC010469.2-201ENST00000496412 480 ntBASIC1.34□□□□□ -2.19
RPGRIP1Q96KN7 AC093852.1-201ENST00000503587 266 ntBASIC1.34□□□□□ -2.19
RPGRIP1Q96KN7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.34□□□□□ -2.19
RPGRIP1Q96KN7 AC010598.1-201ENST00000510378 103 ntBASIC1.34□□□□□ -2.19
RPGRIP1Q96KN7 RNU6-120P-201ENST00000516077 103 ntBASIC1.34□□□□□ -2.19
RPGRIP1Q96KN7 RN7SKP49-201ENST00000516675 260 ntBASIC1.34□□□□□ -2.19
RPGRIP1Q96KN7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.34□□□□□ -2.19
RPGRIP1Q96KN7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.34□□□□□ -2.19
RPGRIP1Q96KN7 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.34□□□□□ -2.19
RPGRIP1Q96KN7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.34□□□□□ -2.19
RPGRIP1Q96KN7 MIR8054-201ENST00000620877 86 ntBASIC1.34□□□□□ -2.19
RPGRIP1Q96KN7 AC006435.5-201ENST00000624486 112 ntBASIC1.34□□□□□ -2.19
RPGRIP1Q96KN7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.34□□□□□ -2.2
RPGRIP1Q96KN7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
RPGRIP1Q96KN7 SNORA20B-201ENST00000384220 132 ntBASIC1.33□□□□□ -2.2
RPGRIP1Q96KN7 RNU6-950P-201ENST00000384651 107 ntBASIC1.33□□□□□ -2.2
RPGRIP1Q96KN7 AL355796.1-201ENST00000406706 323 ntBASIC1.33□□□□□ -2.2
RPGRIP1Q96KN7 Y_RNA.646-201ENST00000410980 101 ntBASIC1.33□□□□□ -2.2
RPGRIP1Q96KN7 RBMX2P4-201ENST00000441256 376 ntBASIC1.33□□□□□ -2.2
RPGRIP1Q96KN7 AC074133.1-201ENST00000515696 183 ntBASIC1.33□□□□□ -2.2
RPGRIP1Q96KN7 AC090821.2-201ENST00000523552 176 ntBASIC1.33□□□□□ -2.2
RPGRIP1Q96KN7 AC018448.1-201ENST00000552843 316 ntBASIC1.33□□□□□ -2.2
RPGRIP1Q96KN7 AC073413.2-201ENST00000604332 360 ntBASIC1.33□□□□□ -2.2
RPGRIP1Q96KN7 AL078604.3-201ENST00000615580 211 ntBASIC1.33□□□□□ -2.2
RPGRIP1Q96KN7 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.33□□□□□ -2.2
RPGRIP1Q96KN7 AC073544.1-201ENST00000600110 1595 ntBASIC1.33□□□□□ -2.2
RPGRIP1Q96KN7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
RPGRIP1Q96KN7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.32□□□□□ -2.2
RPGRIP1Q96KN7 RNU6-1188P-201ENST00000363795 107 ntBASIC1.32□□□□□ -2.2
RPGRIP1Q96KN7 RNU6-310P-201ENST00000384655 107 ntBASIC1.32□□□□□ -2.2
RPGRIP1Q96KN7 MIR513A1-201ENST00000385138 129 ntBASIC1.32□□□□□ -2.2
RPGRIP1Q96KN7 MRPL42P3-201ENST00000401492 326 ntBASIC1.32□□□□□ -2.2
RPGRIP1Q96KN7 RNU6-1304P-201ENST00000411374 106 ntBASIC1.32□□□□□ -2.2
RPGRIP1Q96KN7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.32□□□□□ -2.2
RPGRIP1Q96KN7 AC138393.2-201ENST00000414742 246 ntBASIC1.32□□□□□ -2.2
RPGRIP1Q96KN7 RPS29P29-201ENST00000456396 171 ntBASIC1.32□□□□□ -2.2
RPGRIP1Q96KN7 MIR2053-201ENST00000459295 91 ntBASIC1.32□□□□□ -2.2
RPGRIP1Q96KN7 SNORA20.3-201ENST00000516880 132 ntBASIC1.32□□□□□ -2.2
RPGRIP1Q96KN7 AP002001.1-203ENST00000534002 267 ntBASIC1.32□□□□□ -2.2
RPGRIP1Q96KN7 AL390123.1-201ENST00000603216 237 ntBASIC1.32□□□□□ -2.2
RPGRIP1Q96KN7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.32□□□□□ -2.2
RPGRIP1Q96KN7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.32□□□□□ -2.2
RPGRIP1Q96KN7 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.32□□□□□ -2.2
RPGRIP1Q96KN7 MIR6767-201ENST00000637302 66 ntBASIC1.32□□□□□ -2.2
RPGRIP1Q96KN7 RNU6-1123P-201ENST00000362347 106 ntBASIC1.31□□□□□ -2.2
RPGRIP1Q96KN7 Y_RNA.390-201ENST00000383932 102 ntBASIC1.31□□□□□ -2.2
RPGRIP1Q96KN7 RNU6-1080P-201ENST00000383982 107 ntBASIC1.31□□□□□ -2.2
RPGRIP1Q96KN7 Y_RNA.474-201ENST00000384341 102 ntBASIC1.31□□□□□ -2.2
RPGRIP1Q96KN7 Y_RNA.498-201ENST00000384460 102 ntBASIC1.31□□□□□ -2.2
RPGRIP1Q96KN7 SNORA12.1-201ENST00000390873 148 ntBASIC1.31□□□□□ -2.2
RPGRIP1Q96KN7 RNU6-440P-201ENST00000390882 105 ntBASIC1.31□□□□□ -2.2
RPGRIP1Q96KN7 RN7SKP200-201ENST00000410564 320 ntBASIC1.31□□□□□ -2.2
RPGRIP1Q96KN7 AC098614.3-201ENST00000438957 440 ntBASIC1.31□□□□□ -2.2
RPGRIP1Q96KN7 AC097462.1-201ENST00000514125 324 ntBASIC1.31□□□□□ -2.2
RPGRIP1Q96KN7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.31□□□□□ -2.2
RPGRIP1Q96KN7 SNORA40.9-201ENST00000515895 93 ntBASIC1.31□□□□□ -2.2
RPGRIP1Q96KN7 RNA5SP436-201ENST00000516020 115 ntBASIC1.31□□□□□ -2.2
RPGRIP1Q96KN7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
RPGRIP1Q96KN7 AL365434.2-201ENST00000607979 234 ntBASIC1.31□□□□□ -2.2
RPGRIP1Q96KN7 AC099654.14-201ENST00000638599 341 ntBASIC1.31□□□□□ -2.2
RPGRIP1Q96KN7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
RPGRIP1Q96KN7 AC018630.2-201ENST00000534866 2403 ntBASIC1.3□□□□□ -2.2
RPGRIP1Q96KN7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RPGRIP1Q96KN7 MIR410-201ENST00000362222 80 ntBASIC1.3□□□□□ -2.2
RPGRIP1Q96KN7 RNU6-1301P-201ENST00000362724 104 ntBASIC1.3□□□□□ -2.2
RPGRIP1Q96KN7 RNA5SP259-201ENST00000365541 109 ntBASIC1.3□□□□□ -2.2
RPGRIP1Q96KN7 RNU6-1065P-201ENST00000384513 106 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms