Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.13□□□□□ -1.75
LRCH3Q96II8 RNU6-679P-201ENST00000391003 106 ntBASIC4.13□□□□□ -1.75
LRCH3Q96II8 FTH1P12-201ENST00000432137 551 ntBASIC4.13□□□□□ -1.75
LRCH3Q96II8 RPL30P14-201ENST00000482744 348 ntBASIC4.13□□□□□ -1.75
LRCH3Q96II8 AC091544.4-201ENST00000555268 342 ntBASIC4.13□□□□□ -1.75
LRCH3Q96II8 RPL12P50-201ENST00000603116 116 ntBASIC4.13□□□□□ -1.75
LRCH3Q96II8 MIR6076-201ENST00000617521 113 ntBASIC4.13□□□□□ -1.75
LRCH3Q96II8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC4.13□□□□□ -1.75
LRCH3Q96II8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.13□□□□□ -1.75
LRCH3Q96II8 AC018630.2-201ENST00000534866 2403 ntBASIC4.13□□□□□ -1.75
LRCH3Q96II8 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRCH3Q96II8 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRCH3Q96II8 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.13□□□□□ -1.75
LRCH3Q96II8 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRCH3Q96II8 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRCH3Q96II8 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.12□□□□□ -1.75
LRCH3Q96II8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
LRCH3Q96II8 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
LRCH3Q96II8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.12□□□□□ -1.75
LRCH3Q96II8 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
LRCH3Q96II8 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
LRCH3Q96II8 Y_RNA.191-201ENST00000363972 113 ntBASIC4.12□□□□□ -1.75
LRCH3Q96II8 MIR708-201ENST00000390708 88 ntBASIC4.12□□□□□ -1.75
LRCH3Q96II8 RNA5SP104-201ENST00000410989 118 ntBASIC4.12□□□□□ -1.75
LRCH3Q96II8 RNA5SP306-201ENST00000411087 107 ntBASIC4.12□□□□□ -1.75
LRCH3Q96II8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC4.12□□□□□ -1.75
LRCH3Q96II8 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC4.12□□□□□ -1.75
LRCH3Q96II8 RNU7-80P-201ENST00000459562 61 ntBASIC4.12□□□□□ -1.75
LRCH3Q96II8 S100A11P2-201ENST00000467589 312 ntBASIC4.12□□□□□ -1.75
LRCH3Q96II8 Y_RNA.659-201ENST00000515994 113 ntBASIC4.12□□□□□ -1.75
LRCH3Q96II8 RNU7-143P-201ENST00000516781 65 ntBASIC4.12□□□□□ -1.75
LRCH3Q96II8 SNORA18.7-201ENST00000516910 131 ntBASIC4.12□□□□□ -1.75
LRCH3Q96II8 MIR4778-201ENST00000577635 80 ntBASIC4.12□□□□□ -1.75
LRCH3Q96II8 AC103810.1-201ENST00000579873 453 ntBASIC4.12□□□□□ -1.75
LRCH3Q96II8 DLEU2_5.2-201ENST00000610606 84 ntBASIC4.12□□□□□ -1.75
LRCH3Q96II8 MIR548BB-201ENST00000626714 66 ntBASIC4.12□□□□□ -1.75
LRCH3Q96II8 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LRCH3Q96II8 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.12□□□□□ -1.75
LRCH3Q96II8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
LRCH3Q96II8 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.12□□□□□ -1.75
LRCH3Q96II8 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.12□□□□□ -1.75
LRCH3Q96II8 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LRCH3Q96II8 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LRCH3Q96II8 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LRCH3Q96II8 Y_RNA.267-201ENST00000364679 109 ntBASIC4.11□□□□□ -1.75
LRCH3Q96II8 Y_RNA.377-201ENST00000365644 108 ntBASIC4.11□□□□□ -1.75
LRCH3Q96II8 RNA5SP293-201ENST00000410527 113 ntBASIC4.11□□□□□ -1.75
LRCH3Q96II8 SNORA7.5-201ENST00000410672 110 ntBASIC4.11□□□□□ -1.75
LRCH3Q96II8 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.11□□□□□ -1.75
LRCH3Q96II8 HMGN2P18-201ENST00000450680 270 ntBASIC4.11□□□□□ -1.75
LRCH3Q96II8 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.11□□□□□ -1.75
LRCH3Q96II8 RNU7-128P-201ENST00000517247 62 ntBASIC4.11□□□□□ -1.75
LRCH3Q96II8 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC4.11□□□□□ -1.75
LRCH3Q96II8 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.11□□□□□ -1.75
LRCH3Q96II8 AL033523.1-201ENST00000605153 153 ntBASIC4.11□□□□□ -1.75
LRCH3Q96II8 AL162274.2-201ENST00000614406 332 ntBASIC4.11□□□□□ -1.75
LRCH3Q96II8 Clostridiales-1.3-201ENST00000637703 147 ntBASIC4.11□□□□□ -1.75
LRCH3Q96II8 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LRCH3Q96II8 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRCH3Q96II8 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
LRCH3Q96II8 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
LRCH3Q96II8 Y_RNA.94-201ENST00000363068 106 ntBASIC4.1□□□□□ -1.75
LRCH3Q96II8 SNORA48.8-201ENST00000391324 134 ntBASIC4.1□□□□□ -1.75
LRCH3Q96II8 MIR1261-201ENST00000408659 82 ntBASIC4.1□□□□□ -1.75
LRCH3Q96II8 Y_RNA.607-201ENST00000410597 98 ntBASIC4.1□□□□□ -1.75
LRCH3Q96II8 RNA5SP144-201ENST00000410846 116 ntBASIC4.1□□□□□ -1.75
LRCH3Q96II8 AL512326.2-201ENST00000426359 151 ntBASIC4.1□□□□□ -1.75
LRCH3Q96II8 CYCSP4-201ENST00000429682 331 ntBASIC4.1□□□□□ -1.75
LRCH3Q96II8 RPS15AP28-201ENST00000435088 386 ntBASIC4.1□□□□□ -1.75
LRCH3Q96II8 HMGN2P34-201ENST00000437647 269 ntBASIC4.1□□□□□ -1.75
LRCH3Q96II8 SNORD105B-201ENST00000458770 79 ntBASIC4.1□□□□□ -1.75
LRCH3Q96II8 RN7SL504P-201ENST00000494496 287 ntBASIC4.1□□□□□ -1.75
LRCH3Q96II8 AC025445.1-201ENST00000502728 300 ntBASIC4.1□□□□□ -1.75
LRCH3Q96II8 PHBP14-201ENST00000512887 367 ntBASIC4.1□□□□□ -1.75
LRCH3Q96II8 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.1□□□□□ -1.75
LRCH3Q96II8 IGHVII-40-1-201ENST00000517316 58 ntBASIC4.1□□□□□ -1.75
LRCH3Q96II8 AP003484.1-201ENST00000530974 250 ntBASIC4.1□□□□□ -1.75
LRCH3Q96II8 AC004812.1-201ENST00000540773 146 ntBASIC4.1□□□□□ -1.75
LRCH3Q96II8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
LRCH3Q96II8 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LRCH3Q96II8 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRCH3Q96II8 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.1□□□□□ -1.75
LRCH3Q96II8 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LRCH3Q96II8 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.09□□□□□ -1.75
LRCH3Q96II8 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LRCH3Q96II8 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRCH3Q96II8 SNORA5B-201ENST00000363786 132 ntBASIC4.09□□□□□ -1.75
LRCH3Q96II8 Y_RNA.316-201ENST00000365118 111 ntBASIC4.09□□□□□ -1.75
LRCH3Q96II8 RNU6-442P-201ENST00000383968 104 ntBASIC4.09□□□□□ -1.75
LRCH3Q96II8 SNORA3C-201ENST00000408792 125 ntBASIC4.09□□□□□ -1.75
LRCH3Q96II8 RNU2-40P-201ENST00000410833 196 ntBASIC4.09□□□□□ -1.75
LRCH3Q96II8 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.09□□□□□ -1.75
LRCH3Q96II8 SNRPGP3-201ENST00000469405 227 ntBASIC4.09□□□□□ -1.75
LRCH3Q96II8 RNU7-99P-201ENST00000516271 62 ntBASIC4.09□□□□□ -1.75
LRCH3Q96II8 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.09□□□□□ -1.75
LRCH3Q96II8 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
LRCH3Q96II8 AC078899.2-201ENST00000595282 212 ntBASIC4.09□□□□□ -1.75
LRCH3Q96II8 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
LRCH3Q96II8 MIR1248-201ENST00000629190 106 ntBASIC4.09□□□□□ -1.75
LRCH3Q96II8 MIR6079-201ENST00000635807 62 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms