Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 AP006437.1-201ENST00000641440 3685 ntBASIC3.15□□□□□ -1.91
SHISA4Q96DD7 Y_RNA.251-201ENST00000364551 99 ntBASIC3.15□□□□□ -1.91
SHISA4Q96DD7 RNU6-915P-201ENST00000364943 103 ntBASIC3.15□□□□□ -1.91
SHISA4Q96DD7 RNU6-1323P-201ENST00000384025 107 ntBASIC3.15□□□□□ -1.91
SHISA4Q96DD7 RNU6-1077P-201ENST00000410506 102 ntBASIC3.15□□□□□ -1.91
SHISA4Q96DD7 RNA5SP21-201ENST00000410917 96 ntBASIC3.15□□□□□ -1.91
SHISA4Q96DD7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.15□□□□□ -1.91
SHISA4Q96DD7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.15□□□□□ -1.91
SHISA4Q96DD7 AC244505.4-201ENST00000434905 287 ntBASIC3.15□□□□□ -1.91
SHISA4Q96DD7 SSXP5-201ENST00000443473 287 ntBASIC3.15□□□□□ -1.91
SHISA4Q96DD7 RNU6-1337P-201ENST00000516525 95 ntBASIC3.15□□□□□ -1.91
SHISA4Q96DD7 RNU6-548P-201ENST00000517083 115 ntBASIC3.15□□□□□ -1.91
SHISA4Q96DD7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.15□□□□□ -1.91
SHISA4Q96DD7 Y_RNA.757-201ENST00000578934 114 ntBASIC3.15□□□□□ -1.91
SHISA4Q96DD7 ZNF861P-201ENST00000588126 639 ntBASIC3.15□□□□□ -1.91
SHISA4Q96DD7 POLR3GP1-201ENST00000594073 261 ntBASIC3.15□□□□□ -1.91
SHISA4Q96DD7 AC008739.2-201ENST00000597006 317 ntBASIC3.15□□□□□ -1.91
SHISA4Q96DD7 AP003357.1-201ENST00000604497 148 ntBASIC3.15□□□□□ -1.91
SHISA4Q96DD7 MIR7111-201ENST00000619751 72 ntBASIC3.15□□□□□ -1.91
SHISA4Q96DD7 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.15□□□□□ -1.91
SHISA4Q96DD7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.15□□□□□ -1.91
SHISA4Q96DD7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.15□□□□□ -1.91
SHISA4Q96DD7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SHISA4Q96DD7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SHISA4Q96DD7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHISA4Q96DD7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
SHISA4Q96DD7 RNA5SP289-201ENST00000362332 137 ntBASIC3.14□□□□□ -1.91
SHISA4Q96DD7 Y_RNA.124-201ENST00000363339 93 ntBASIC3.14□□□□□ -1.91
SHISA4Q96DD7 RNU6-597P-201ENST00000365620 102 ntBASIC3.14□□□□□ -1.91
SHISA4Q96DD7 Y_RNA.584-201ENST00000391090 114 ntBASIC3.14□□□□□ -1.91
SHISA4Q96DD7 RNA5SP496-201ENST00000391240 109 ntBASIC3.14□□□□□ -1.91
SHISA4Q96DD7 MIR300-201ENST00000401138 83 ntBASIC3.14□□□□□ -1.91
SHISA4Q96DD7 AL512604.1-201ENST00000404812 257 ntBASIC3.14□□□□□ -1.91
SHISA4Q96DD7 Y_RNA.622-201ENST00000411091 108 ntBASIC3.14□□□□□ -1.91
SHISA4Q96DD7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.14□□□□□ -1.91
SHISA4Q96DD7 Z98742.3-201ENST00000418637 326 ntBASIC3.14□□□□□ -1.91
SHISA4Q96DD7 HMGN2P9-201ENST00000476875 229 ntBASIC3.14□□□□□ -1.91
SHISA4Q96DD7 RPL36AP21-201ENST00000490372 323 ntBASIC3.14□□□□□ -1.91
SHISA4Q96DD7 MIR378D2-201ENST00000580636 98 ntBASIC3.14□□□□□ -1.91
SHISA4Q96DD7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.14□□□□□ -1.91
SHISA4Q96DD7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHISA4Q96DD7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SHISA4Q96DD7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SHISA4Q96DD7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.13□□□□□ -1.91
SHISA4Q96DD7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SHISA4Q96DD7 SNORD45.3-201ENST00000363836 72 ntBASIC3.13□□□□□ -1.91
SHISA4Q96DD7 RNA5SP99-201ENST00000364020 114 ntBASIC3.13□□□□□ -1.91
SHISA4Q96DD7 SNORD32B-201ENST00000364460 84 ntBASIC3.13□□□□□ -1.91
SHISA4Q96DD7 SNORA20B-201ENST00000384220 132 ntBASIC3.13□□□□□ -1.91
SHISA4Q96DD7 RNU6-476P-201ENST00000384726 107 ntBASIC3.13□□□□□ -1.91
SHISA4Q96DD7 MIR592-201ENST00000384959 97 ntBASIC3.13□□□□□ -1.91
SHISA4Q96DD7 MIR29B2-201ENST00000385055 81 ntBASIC3.13□□□□□ -1.91
SHISA4Q96DD7 AC245047.4-201ENST00000433189 144 ntBASIC3.13□□□□□ -1.91
SHISA4Q96DD7 AL357134.1-201ENST00000445848 426 ntBASIC3.13□□□□□ -1.91
SHISA4Q96DD7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.13□□□□□ -1.91
SHISA4Q96DD7 RNU7-107P-201ENST00000459121 61 ntBASIC3.13□□□□□ -1.91
SHISA4Q96DD7 RNU6-1098P-201ENST00000516772 96 ntBASIC3.13□□□□□ -1.91
SHISA4Q96DD7 Y_RNA.712-201ENST00000517011 92 ntBASIC3.13□□□□□ -1.91
SHISA4Q96DD7 AC127455.1-201ENST00000565496 145 ntBASIC3.13□□□□□ -1.91
SHISA4Q96DD7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.13□□□□□ -1.91
SHISA4Q96DD7 AC005972.2-201ENST00000604690 348 ntBASIC3.13□□□□□ -1.91
SHISA4Q96DD7 AC107294.3-201ENST00000609211 526 ntBASIC3.13□□□□□ -1.91
SHISA4Q96DD7 MIR4679-1-201ENST00000637619 75 ntBASIC3.13□□□□□ -1.91
SHISA4Q96DD7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SHISA4Q96DD7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SHISA4Q96DD7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.12□□□□□ -1.91
SHISA4Q96DD7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SHISA4Q96DD7 AL391516.1-201ENST00000554380 2449 ntBASIC3.12□□□□□ -1.91
SHISA4Q96DD7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SHISA4Q96DD7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SHISA4Q96DD7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SHISA4Q96DD7 RNU6-1144P-201ENST00000384247 104 ntBASIC3.12□□□□□ -1.91
SHISA4Q96DD7 AL355796.1-201ENST00000406706 323 ntBASIC3.12□□□□□ -1.91
SHISA4Q96DD7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.12□□□□□ -1.91
SHISA4Q96DD7 AC097463.2-201ENST00000421074 142 ntBASIC3.12□□□□□ -1.91
SHISA4Q96DD7 RNU7-57P-201ENST00000459540 60 ntBASIC3.12□□□□□ -1.91
SHISA4Q96DD7 AC010598.1-201ENST00000510378 103 ntBASIC3.12□□□□□ -1.91
SHISA4Q96DD7 MIR4753-201ENST00000585119 83 ntBASIC3.12□□□□□ -1.91
SHISA4Q96DD7 AL031274.2-201ENST00000599419 203 ntBASIC3.12□□□□□ -1.91
SHISA4Q96DD7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHISA4Q96DD7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHISA4Q96DD7 SNORA27.1-201ENST00000362604 124 ntBASIC3.11□□□□□ -1.91
SHISA4Q96DD7 RNU6-1080P-201ENST00000383982 107 ntBASIC3.11□□□□□ -1.91
SHISA4Q96DD7 RNY4P18-201ENST00000391107 89 ntBASIC3.11□□□□□ -1.91
SHISA4Q96DD7 MIR1283-1-201ENST00000408494 87 ntBASIC3.11□□□□□ -1.91
SHISA4Q96DD7 RNA5SP38-201ENST00000410750 119 ntBASIC3.11□□□□□ -1.91
SHISA4Q96DD7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.11□□□□□ -1.91
SHISA4Q96DD7 SNRPGP8-201ENST00000454064 226 ntBASIC3.11□□□□□ -1.91
SHISA4Q96DD7 RNU6-437P-201ENST00000459408 95 ntBASIC3.11□□□□□ -1.91
SHISA4Q96DD7 RPS26P55-201ENST00000471178 356 ntBASIC3.11□□□□□ -1.91
SHISA4Q96DD7 RPL23AP54-201ENST00000495129 419 ntBASIC3.11□□□□□ -1.91
SHISA4Q96DD7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.11□□□□□ -1.91
SHISA4Q96DD7 SNORA31.21-201ENST00000517180 77 ntBASIC3.11□□□□□ -1.91
SHISA4Q96DD7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.11□□□□□ -1.91
SHISA4Q96DD7 CYCSP26-201ENST00000534107 320 ntBASIC3.11□□□□□ -1.91
SHISA4Q96DD7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHISA4Q96DD7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SHISA4Q96DD7 AC009487.2-201ENST00000420969 6821 ntBASIC3.1□□□□□ -1.91
SHISA4Q96DD7 MIR26A1-201ENST00000362205 77 ntBASIC3.1□□□□□ -1.91
SHISA4Q96DD7 SNORA63.4-201ENST00000362763 126 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms