Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 MIR338-201ENST00000636369 67 ntBASIC2.45□□□□□ -2.02
HPS3Q969F9 AC005336.3-201ENST00000623833 2679 ntBASIC2.45□□□□□ -2.02
HPS3Q969F9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HPS3Q969F9 AC010615.1-201ENST00000594254 1764 ntBASIC2.44□□□□□ -2.02
HPS3Q969F9 Y_RNA.541-201ENST00000384640 113 ntBASIC2.44□□□□□ -2.02
HPS3Q969F9 MIR597-201ENST00000384968 97 ntBASIC2.44□□□□□ -2.02
HPS3Q969F9 MIR1283-2-201ENST00000408621 87 ntBASIC2.44□□□□□ -2.02
HPS3Q969F9 Z98742.3-201ENST00000418637 326 ntBASIC2.44□□□□□ -2.02
HPS3Q969F9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.44□□□□□ -2.02
HPS3Q969F9 RPS29P21-201ENST00000496272 170 ntBASIC2.44□□□□□ -2.02
HPS3Q969F9 RNA5SP20-201ENST00000515976 84 ntBASIC2.44□□□□□ -2.02
HPS3Q969F9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.44□□□□□ -2.02
HPS3Q969F9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.44□□□□□ -2.02
HPS3Q969F9 AC012640.5-201ENST00000623897 319 ntBASIC2.44□□□□□ -2.02
HPS3Q969F9 AC127459.3-201ENST00000624328 466 ntBASIC2.44□□□□□ -2.02
HPS3Q969F9 RNU6-862P-201ENST00000362804 105 ntBASIC2.43□□□□□ -2.02
HPS3Q969F9 Y_RNA.288-201ENST00000364854 92 ntBASIC2.43□□□□□ -2.02
HPS3Q969F9 RNU6-326P-201ENST00000365480 107 ntBASIC2.43□□□□□ -2.02
HPS3Q969F9 Y_RNA.361-201ENST00000365515 120 ntBASIC2.43□□□□□ -2.02
HPS3Q969F9 RNU6-514P-201ENST00000384208 107 ntBASIC2.43□□□□□ -2.02
HPS3Q969F9 SNORD23.1-201ENST00000408212 104 ntBASIC2.43□□□□□ -2.02
HPS3Q969F9 CST2P1-201ENST00000425770 87 ntBASIC2.43□□□□□ -2.02
HPS3Q969F9 MRPS10P1-201ENST00000448483 130 ntBASIC2.43□□□□□ -2.02
HPS3Q969F9 RPL23AP7-203ENST00000449021 469 ntBASIC2.43□□□□□ -2.02
HPS3Q969F9 RNU2-31P-201ENST00000516954 155 ntBASIC2.43□□□□□ -2.02
HPS3Q969F9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.43□□□□□ -2.02
HPS3Q969F9 AC023157.2-201ENST00000540596 141 ntBASIC2.43□□□□□ -2.02
HPS3Q969F9 MIR4648-201ENST00000580107 72 ntBASIC2.43□□□□□ -2.02
HPS3Q969F9 MIR4769-201ENST00000584126 77 ntBASIC2.43□□□□□ -2.02
HPS3Q969F9 MIR4438-201ENST00000585271 93 ntBASIC2.43□□□□□ -2.02
HPS3Q969F9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HPS3Q969F9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HPS3Q969F9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.42□□□□□ -2.02
HPS3Q969F9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
HPS3Q969F9 RNU1-96P-201ENST00000364163 162 ntBASIC2.42□□□□□ -2.02
HPS3Q969F9 Y_RNA.287-201ENST00000364853 94 ntBASIC2.42□□□□□ -2.02
HPS3Q969F9 RNU6-505P-201ENST00000384427 107 ntBASIC2.42□□□□□ -2.02
HPS3Q969F9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
HPS3Q969F9 RNA5SP323-201ENST00000391094 133 ntBASIC2.42□□□□□ -2.02
HPS3Q969F9 RNU11-5P-201ENST00000391216 129 ntBASIC2.42□□□□□ -2.02
HPS3Q969F9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.42□□□□□ -2.02
HPS3Q969F9 AC104435.1-201ENST00000483483 166 ntBASIC2.42□□□□□ -2.02
HPS3Q969F9 RNU6-1338P-201ENST00000516328 91 ntBASIC2.42□□□□□ -2.02
HPS3Q969F9 MIR4503-201ENST00000582187 83 ntBASIC2.42□□□□□ -2.02
HPS3Q969F9 AC007229.1-201ENST00000590455 412 ntBASIC2.42□□□□□ -2.02
HPS3Q969F9 AL359075.3-201ENST00000613288 217 ntBASIC2.42□□□□□ -2.02
HPS3Q969F9 U6.73-201ENST00000619194 103 ntBASIC2.42□□□□□ -2.02
HPS3Q969F9 U1.36-201ENST00000620684 176 ntBASIC2.42□□□□□ -2.02
HPS3Q969F9 AC009831.4-201ENST00000620744 325 ntBASIC2.42□□□□□ -2.02
HPS3Q969F9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HPS3Q969F9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
HPS3Q969F9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
HPS3Q969F9 AL391987.6-201ENST00000305671 199 ntBASIC2.41□□□□□ -2.02
HPS3Q969F9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HPS3Q969F9 MIRLET7G-201ENST00000362280 84 ntBASIC2.41□□□□□ -2.02
HPS3Q969F9 SNORA25.1-201ENST00000362326 128 ntBASIC2.41□□□□□ -2.02
HPS3Q969F9 Y_RNA.136-201ENST00000363444 102 ntBASIC2.41□□□□□ -2.02
HPS3Q969F9 Y_RNA.452-201ENST00000384202 108 ntBASIC2.41□□□□□ -2.02
HPS3Q969F9 AL023284.1-201ENST00000403956 276 ntBASIC2.41□□□□□ -2.02
HPS3Q969F9 AL117342.1-201ENST00000404861 406 ntBASIC2.41□□□□□ -2.02
HPS3Q969F9 RNU2-61P-201ENST00000411069 191 ntBASIC2.41□□□□□ -2.02
HPS3Q969F9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.41□□□□□ -2.02
HPS3Q969F9 RPS26P55-201ENST00000471178 356 ntBASIC2.41□□□□□ -2.02
HPS3Q969F9 RNU1-142P-201ENST00000516682 145 ntBASIC2.41□□□□□ -2.02
HPS3Q969F9 DEFB108E-201ENST00000524692 240 ntBASIC2.41□□□□□ -2.02
HPS3Q969F9 MIR3149-201ENST00000584629 83 ntBASIC2.41□□□□□ -2.02
HPS3Q969F9 MIR5002-201ENST00000584713 97 ntBASIC2.41□□□□□ -2.02
HPS3Q969F9 DEFB117-201ENST00000602356 141 ntBASIC2.41□□□□□ -2.02
HPS3Q969F9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
HPS3Q969F9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
HPS3Q969F9 RNU6-702P-201ENST00000364982 107 ntBASIC2.4□□□□□ -2.03
HPS3Q969F9 Y_RNA.396-201ENST00000383949 103 ntBASIC2.4□□□□□ -2.03
HPS3Q969F9 Y_RNA.483-201ENST00000384380 101 ntBASIC2.4□□□□□ -2.03
HPS3Q969F9 MT-TW-201ENST00000387382 68 ntBASIC2.4□□□□□ -2.03
HPS3Q969F9 RNU6-1186P-201ENST00000410429 97 ntBASIC2.4□□□□□ -2.03
HPS3Q969F9 HSPE1P13-201ENST00000451143 297 ntBASIC2.4□□□□□ -2.03
HPS3Q969F9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.4□□□□□ -2.03
HPS3Q969F9 RNU6-1278P-201ENST00000516130 107 ntBASIC2.4□□□□□ -2.03
HPS3Q969F9 RNU2-19P-201ENST00000517288 84 ntBASIC2.4□□□□□ -2.03
HPS3Q969F9 AC024995.1-201ENST00000523014 93 ntBASIC2.4□□□□□ -2.03
HPS3Q969F9 AC004817.2-201ENST00000561794 651 ntBASIC2.4□□□□□ -2.03
HPS3Q969F9 DEFB122-202ENST00000569013 197 ntBASIC2.4□□□□□ -2.03
HPS3Q969F9 AL512605.2-201ENST00000592972 256 ntBASIC2.4□□□□□ -2.03
HPS3Q969F9 AC069114.2-201ENST00000604699 304 ntBASIC2.4□□□□□ -2.03
HPS3Q969F9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.4□□□□□ -2.03
HPS3Q969F9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HPS3Q969F9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.39□□□□□ -2.03
HPS3Q969F9 MIR335-201ENST00000362173 94 ntBASIC2.39□□□□□ -2.03
HPS3Q969F9 Y_RNA.124-201ENST00000363339 93 ntBASIC2.39□□□□□ -2.03
HPS3Q969F9 RNU6-472P-201ENST00000384299 107 ntBASIC2.39□□□□□ -2.03
HPS3Q969F9 RN7SKP223-201ENST00000410582 62 ntBASIC2.39□□□□□ -2.03
HPS3Q969F9 RNA5SP450-201ENST00000411206 102 ntBASIC2.39□□□□□ -2.03
HPS3Q969F9 MTND2P29-201ENST00000438595 412 ntBASIC2.39□□□□□ -2.03
HPS3Q969F9 AC010409.1-201ENST00000487382 476 ntBASIC2.39□□□□□ -2.03
HPS3Q969F9 SERF1AP1-201ENST00000514575 187 ntBASIC2.39□□□□□ -2.03
HPS3Q969F9 RNU7-172P-201ENST00000517125 64 ntBASIC2.39□□□□□ -2.03
HPS3Q969F9 RPL21P9-201ENST00000556149 474 ntBASIC2.39□□□□□ -2.03
HPS3Q969F9 MIR3145-201ENST00000580727 82 ntBASIC2.39□□□□□ -2.03
HPS3Q969F9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.39□□□□□ -2.03
HPS3Q969F9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms