Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 RNU6-855P-201ENST00000410395 104 ntBASIC2.54□□□□□ -2
CCHCR1Q8TD31 RN7SKP284-201ENST00000411002 343 ntBASIC2.54□□□□□ -2
CCHCR1Q8TD31 AC060773.1-201ENST00000421698 310 ntBASIC2.54□□□□□ -2
CCHCR1Q8TD31 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.54□□□□□ -2
CCHCR1Q8TD31 SUMO2P18-201ENST00000518873 252 ntBASIC2.54□□□□□ -2
CCHCR1Q8TD31 IGLV3-17-201ENST00000519099 244 ntBASIC2.54□□□□□ -2
CCHCR1Q8TD31 MIR5694-201ENST00000581190 76 ntBASIC2.54□□□□□ -2
CCHCR1Q8TD31 MIR6817-201ENST00000615588 66 ntBASIC2.54□□□□□ -2
CCHCR1Q8TD31 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.54□□□□□ -2
CCHCR1Q8TD31 SNORA72.4-201ENST00000384174 132 ntBASIC2.53□□□□□ -2
CCHCR1Q8TD31 SNORA26.5-201ENST00000391215 123 ntBASIC2.53□□□□□ -2
CCHCR1Q8TD31 BTF3P11-201ENST00000426582 477 ntBASIC2.53□□□□□ -2
CCHCR1Q8TD31 AL353689.1-201ENST00000438895 199 ntBASIC2.53□□□□□ -2
CCHCR1Q8TD31 RNA5SP20-201ENST00000515976 84 ntBASIC2.53□□□□□ -2
CCHCR1Q8TD31 SNORA81.3-201ENST00000517283 198 ntBASIC2.53□□□□□ -2
CCHCR1Q8TD31 CENPCP1-201ENST00000533085 2578 ntBASIC2.53□□□□□ -2.01
CCHCR1Q8TD31 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCHCR1Q8TD31 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
CCHCR1Q8TD31 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCHCR1Q8TD31 Y_RNA.172-201ENST00000363765 102 ntBASIC2.52□□□□□ -2.01
CCHCR1Q8TD31 SNORD114-6-201ENST00000364393 72 ntBASIC2.52□□□□□ -2.01
CCHCR1Q8TD31 Y_RNA.304-201ENST00000365011 112 ntBASIC2.52□□□□□ -2.01
CCHCR1Q8TD31 RNU1-148P-201ENST00000384472 162 ntBASIC2.52□□□□□ -2.01
CCHCR1Q8TD31 AL513328.1-201ENST00000446460 224 ntBASIC2.52□□□□□ -2.01
CCHCR1Q8TD31 AL138752.1-201ENST00000452964 351 ntBASIC2.52□□□□□ -2.01
CCHCR1Q8TD31 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.52□□□□□ -2.01
CCHCR1Q8TD31 RPL36AP21-201ENST00000490372 323 ntBASIC2.52□□□□□ -2.01
CCHCR1Q8TD31 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.52□□□□□ -2.01
CCHCR1Q8TD31 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.52□□□□□ -2.01
CCHCR1Q8TD31 RNU6-1337P-201ENST00000516525 95 ntBASIC2.52□□□□□ -2.01
CCHCR1Q8TD31 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.52□□□□□ -2.01
CCHCR1Q8TD31 CBX3P4-201ENST00000538909 354 ntBASIC2.52□□□□□ -2.01
CCHCR1Q8TD31 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.52□□□□□ -2.01
CCHCR1Q8TD31 AC121758.2-201ENST00000553271 193 ntBASIC2.52□□□□□ -2.01
CCHCR1Q8TD31 AC067747.1-201ENST00000608026 250 ntBASIC2.52□□□□□ -2.01
CCHCR1Q8TD31 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCHCR1Q8TD31 Y_RNA.29-201ENST00000362570 113 ntBASIC2.51□□□□□ -2.01
CCHCR1Q8TD31 Y_RNA.287-201ENST00000364853 94 ntBASIC2.51□□□□□ -2.01
CCHCR1Q8TD31 RNU6-407P-201ENST00000365280 104 ntBASIC2.51□□□□□ -2.01
CCHCR1Q8TD31 RNU6-117P-201ENST00000365415 107 ntBASIC2.51□□□□□ -2.01
CCHCR1Q8TD31 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.51□□□□□ -2.01
CCHCR1Q8TD31 RPS20P10-201ENST00000451209 253 ntBASIC2.51□□□□□ -2.01
CCHCR1Q8TD31 U8.19-201ENST00000459095 133 ntBASIC2.51□□□□□ -2.01
CCHCR1Q8TD31 RNA5SP148-201ENST00000516527 94 ntBASIC2.51□□□□□ -2.01
CCHCR1Q8TD31 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.51□□□□□ -2.01
CCHCR1Q8TD31 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.51□□□□□ -2.01
CCHCR1Q8TD31 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.51□□□□□ -2.01
CCHCR1Q8TD31 Z83818.1-201ENST00000603584 150 ntBASIC2.51□□□□□ -2.01
CCHCR1Q8TD31 AL353149.1-201ENST00000610667 244 ntBASIC2.51□□□□□ -2.01
CCHCR1Q8TD31 AC013791.1-201ENST00000616619 62 ntBASIC2.51□□□□□ -2.01
CCHCR1Q8TD31 AL365265.1-201ENST00000621045 234 ntBASIC2.51□□□□□ -2.01
CCHCR1Q8TD31 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.51□□□□□ -2.01
CCHCR1Q8TD31 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCHCR1Q8TD31 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 MIRLET7G-201ENST00000362280 84 ntBASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 RNU6-653P-201ENST00000363074 106 ntBASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 RNU6-160P-201ENST00000384591 107 ntBASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 AC009310.1-201ENST00000414414 451 ntBASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 OOSP1P1-201ENST00000423265 274 ntBASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 AC010154.1-201ENST00000425857 269 ntBASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 MTND5P15-201ENST00000434246 349 ntBASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 Y_RNA.644-201ENST00000459006 113 ntBASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 AC011406.1-201ENST00000512440 370 ntBASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 RNA5SP320-201ENST00000516263 124 ntBASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 Y_RNA.674-201ENST00000516362 113 ntBASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 RNU6-182P-201ENST00000516970 105 ntBASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 AP005660.1-201ENST00000522972 293 ntBASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 AC027419.1-201ENST00000522976 328 ntBASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 AC026271.5-201ENST00000577873 130 ntBASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.5□□□□□ -2.01
CCHCR1Q8TD31 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCHCR1Q8TD31 AC016717.2-201ENST00000609089 5141 ntBASIC2.49□□□□□ -2.01
CCHCR1Q8TD31 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCHCR1Q8TD31 RNU6-1164P-201ENST00000364428 107 ntBASIC2.49□□□□□ -2.01
CCHCR1Q8TD31 SNORA6-201ENST00000384033 151 ntBASIC2.49□□□□□ -2.01
CCHCR1Q8TD31 SNORD116-13-201ENST00000384408 92 ntBASIC2.49□□□□□ -2.01
CCHCR1Q8TD31 AL355497.1-201ENST00000406262 551 ntBASIC2.49□□□□□ -2.01
CCHCR1Q8TD31 HMGN2P34-201ENST00000437647 269 ntBASIC2.49□□□□□ -2.01
CCHCR1Q8TD31 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.49□□□□□ -2.01
CCHCR1Q8TD31 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.49□□□□□ -2.01
CCHCR1Q8TD31 RNU6-1146P-201ENST00000516282 102 ntBASIC2.49□□□□□ -2.01
CCHCR1Q8TD31 MIR5692C2-201ENST00000577959 77 ntBASIC2.49□□□□□ -2.01
CCHCR1Q8TD31 AC004832.4-201ENST00000608952 331 ntBASIC2.49□□□□□ -2.01
CCHCR1Q8TD31 AC098479.1-201ENST00000609225 154 ntBASIC2.49□□□□□ -2.01
CCHCR1Q8TD31 AC004792.1-201ENST00000614523 137 ntBASIC2.49□□□□□ -2.01
CCHCR1Q8TD31 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.49□□□□□ -2.01
CCHCR1Q8TD31 U6.73-201ENST00000619194 103 ntBASIC2.49□□□□□ -2.01
CCHCR1Q8TD31 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCHCR1Q8TD31 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.49□□□□□ -2.01
CCHCR1Q8TD31 ZNF720P1-201ENST00000562403 1939 ntBASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 AL356292.1-201ENST00000283110 373 ntBASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 snoU2-30.2-201ENST00000362805 70 ntBASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 RNU1-22P-201ENST00000363334 158 ntBASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 RNU6-899P-201ENST00000363947 107 ntBASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 RNU6-1048P-201ENST00000364054 107 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms