Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 RNU6-985P-201ENST00000410182 104 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 RNU4-30P-201ENST00000410245 143 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 RNU6-1199P-201ENST00000411249 104 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01006Q8NI28 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.35□□□□□ -2.19
LINC01006Q8NI28 SNORD65B-201ENST00000459126 73 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 SCARNA15.1-201ENST00000516384 125 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 RNU6-764P-201ENST00000516396 105 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 RNU6-897P-201ENST00000517135 105 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.721-201ENST00000517207 102 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 RNU2-12P-201ENST00000517216 168 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 SUMO2P18-201ENST00000518873 252 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 MIR5094-201ENST00000578766 85 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 MIR4423-201ENST00000580922 80 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.772-201ENST00000606692 102 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 AL627230.6-201ENST00000611129 280 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 AL773524.1-201ENST00000614065 229 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 MIR338-201ENST00000636369 67 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
LINC01006Q8NI28 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
LINC01006Q8NI28 MIR337-201ENST00000362281 93 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 SNORA72.2-201ENST00000365028 127 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 RNU6-806P-201ENST00000365147 105 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 RNU6-1240P-201ENST00000365155 104 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 RNU6-1175P-201ENST00000365200 107 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 SNORA20B-201ENST00000384220 132 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 RNU6-1160P-201ENST00000384546 104 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 SNORA8-201ENST00000384574 139 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 RNU6-121P-201ENST00000410525 99 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 RNA5SP475-201ENST00000410568 110 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 RNU6-321P-201ENST00000410912 106 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 AC008134.1-201ENST00000420943 193 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 ELOCP20-201ENST00000422460 345 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.34□□□□□ -2.19
LINC01006Q8NI28 MTATP8P1-201ENST00000467115 207 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.34□□□□□ -2.19
LINC01006Q8NI28 AC023157.2-201ENST00000540596 141 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.34□□□□□ -2.19
LINC01006Q8NI28 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.34□□□□□ -2.19
LINC01006Q8NI28 MIR4299-201ENST00000577899 72 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 AC005786.1-201ENST00000588553 154 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 AC006504.6-201ENST00000590142 199 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 AL096840.1-201ENST00000603287 93 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 AL353149.1-201ENST00000610667 244 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 uc_338.20-201ENST00000621563 178 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 U6.115-201ENST00000636045 103 ntBASIC1.34□□□□□ -2.19
LINC01006Q8NI28 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.33□□□□□ -2.2
LINC01006Q8NI28 SNORD115-30-201ENST00000364117 82 ntBASIC1.33□□□□□ -2.2
LINC01006Q8NI28 RNU1-96P-201ENST00000364163 162 ntBASIC1.33□□□□□ -2.2
LINC01006Q8NI28 Y_RNA.226-201ENST00000364337 114 ntBASIC1.33□□□□□ -2.2
LINC01006Q8NI28 Y_RNA.286-201ENST00000364813 102 ntBASIC1.33□□□□□ -2.2
LINC01006Q8NI28 Y_RNA.446-201ENST00000384178 104 ntBASIC1.33□□□□□ -2.2
LINC01006Q8NI28 RNU6-102P-201ENST00000384485 104 ntBASIC1.33□□□□□ -2.2
LINC01006Q8NI28 SNORA48.1-201ENST00000390879 135 ntBASIC1.33□□□□□ -2.2
LINC01006Q8NI28 RNA5SP212-201ENST00000391223 107 ntBASIC1.33□□□□□ -2.2
LINC01006Q8NI28 RNA5SP467-201ENST00000391274 118 ntBASIC1.33□□□□□ -2.2
LINC01006Q8NI28 MIR1253-201ENST00000408273 105 ntBASIC1.33□□□□□ -2.2
LINC01006Q8NI28 AC244636.1-201ENST00000421152 228 ntBASIC1.33□□□□□ -2.2
LINC01006Q8NI28 MRPS35P2-201ENST00000508242 191 ntBASIC1.33□□□□□ -2.2
LINC01006Q8NI28 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LINC01006Q8NI28 MRPS17P9-201ENST00000511924 393 ntBASIC1.33□□□□□ -2.2
LINC01006Q8NI28 RNU6-155P-201ENST00000516347 100 ntBASIC1.33□□□□□ -2.2
LINC01006Q8NI28 DNAJC19P9-201ENST00000555084 351 ntBASIC1.33□□□□□ -2.2
LINC01006Q8NI28 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01006Q8NI28 MIR4419B-201ENST00000577260 68 ntBASIC1.33□□□□□ -2.2
LINC01006Q8NI28 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.33□□□□□ -2.2
LINC01006Q8NI28 MIR4300-201ENST00000581016 96 ntBASIC1.33□□□□□ -2.2
LINC01006Q8NI28 AL360085.1-201ENST00000604713 532 ntBASIC1.33□□□□□ -2.2
LINC01006Q8NI28 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.33□□□□□ -2.2
LINC01006Q8NI28 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.33□□□□□ -2.2
LINC01006Q8NI28 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LINC01006Q8NI28 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LINC01006Q8NI28 AC131280.1-202ENST00000624067 4211 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 RNU6-1266P-201ENST00000362794 105 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 Y_RNA.214-201ENST00000364201 112 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 SNORA63.7-201ENST00000365579 123 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 Y_RNA.380-201ENST00000365663 111 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 RNU2-54P-201ENST00000410299 190 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 RPL21P38-201ENST00000418090 167 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 RPL23AP6-201ENST00000446637 472 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 MIR514B-201ENST00000516774 80 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 RNU7-110P-201ENST00000516891 62 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 RNU7-128P-201ENST00000517247 62 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.32□□□□□ -2.2
LINC01006Q8NI28 AL442663.2-201ENST00000554385 511 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.32□□□□□ -2.2
LINC01006Q8NI28 MIR3935-201ENST00000583472 104 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 AC008749.1-201ENST00000597650 306 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.32□□□□□ -2.2
LINC01006Q8NI28 AL355297.3-201ENST00000604082 446 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 AL359821.1-201ENST00000605519 182 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 AC022441.3-201ENST00000605737 136 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 AC005828.6-201ENST00000606610 232 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 AL512598.1-201ENST00000610158 273 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 MIR376A1-201ENST00000616574 68 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 U6.108-201ENST00000637764 58 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.32□□□□□ -2.2
LINC01006Q8NI28 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
LINC01006Q8NI28 SNORD81.1-201ENST00000363064 77 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms