Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RNU2-32P-201ENST00000411193 191 ntBASIC2.62□□□□□ -1.99
SIMC1Q8NDZ2 EBAG9P1-201ENST00000418955 543 ntBASIC2.62□□□□□ -1.99
SIMC1Q8NDZ2 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.62□□□□□ -1.99
SIMC1Q8NDZ2 CR769767.1-201ENST00000436337 346 ntBASIC2.62□□□□□ -1.99
SIMC1Q8NDZ2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.62□□□□□ -1.99
SIMC1Q8NDZ2 RNU6-237P-201ENST00000515985 71 ntBASIC2.62□□□□□ -1.99
SIMC1Q8NDZ2 RNA5SP272-201ENST00000516095 111 ntBASIC2.62□□□□□ -1.99
SIMC1Q8NDZ2 RNU6-479P-201ENST00000516348 105 ntBASIC2.62□□□□□ -1.99
SIMC1Q8NDZ2 RNU7-121P-201ENST00000516604 62 ntBASIC2.62□□□□□ -1.99
SIMC1Q8NDZ2 AC022616.8-201ENST00000533569 253 ntBASIC2.62□□□□□ -1.99
SIMC1Q8NDZ2 MIR3126-201ENST00000577443 74 ntBASIC2.62□□□□□ -1.99
SIMC1Q8NDZ2 MIR4744-201ENST00000581563 82 ntBASIC2.62□□□□□ -1.99
SIMC1Q8NDZ2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 RNU4-82P-201ENST00000362443 140 ntBASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 Y_RNA.287-201ENST00000364853 94 ntBASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 Y_RNA.293-201ENST00000364908 93 ntBASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 SNORA25B-201ENST00000365507 128 ntBASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 MIR569-201ENST00000385228 96 ntBASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 MIR524-201ENST00000385242 87 ntBASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 RNU6-578P-201ENST00000390980 103 ntBASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 RNU6-710P-201ENST00000410424 105 ntBASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 TOMM22P2-201ENST00000430735 237 ntBASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 UBL5P3-201ENST00000475112 231 ntBASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 RN7SKP132-201ENST00000516001 208 ntBASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 RN7SKP164-201ENST00000516138 266 ntBASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 HSPE1P18-201ENST00000517602 280 ntBASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 AC026271.5-201ENST00000577873 130 ntBASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 MIR3684-201ENST00000579779 74 ntBASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 U6.115-201ENST00000636045 103 ntBASIC2.61□□□□□ -1.99
SIMC1Q8NDZ2 ZNF271P-202ENST00000465539 1970 ntBASIC2.6□□□□□ -1.99
SIMC1Q8NDZ2 AC100821.1-201ENST00000523153 2479 ntBASIC2.6□□□□□ -1.99
SIMC1Q8NDZ2 Y_RNA.368-201ENST00000365547 113 ntBASIC2.6□□□□□ -1.99
SIMC1Q8NDZ2 SNORA8.3-201ENST00000384679 139 ntBASIC2.6□□□□□ -1.99
SIMC1Q8NDZ2 RNU6-417P-201ENST00000384712 107 ntBASIC2.6□□□□□ -1.99
SIMC1Q8NDZ2 Y_RNA.572-201ENST00000384757 98 ntBASIC2.6□□□□□ -1.99
SIMC1Q8NDZ2 RNU6-1154P-201ENST00000391001 104 ntBASIC2.6□□□□□ -1.99
SIMC1Q8NDZ2 SNORA12-201ENST00000391162 147 ntBASIC2.6□□□□□ -1.99
SIMC1Q8NDZ2 RNU6-257P-201ENST00000410238 98 ntBASIC2.6□□□□□ -1.99
SIMC1Q8NDZ2 RNU6-735P-201ENST00000410612 107 ntBASIC2.6□□□□□ -1.99
SIMC1Q8NDZ2 AC105272.1-201ENST00000438604 198 ntBASIC2.6□□□□□ -1.99
SIMC1Q8NDZ2 YWHAEP4-201ENST00000505390 198 ntBASIC2.6□□□□□ -1.99
SIMC1Q8NDZ2 RNU6-313P-201ENST00000516317 112 ntBASIC2.6□□□□□ -1.99
SIMC1Q8NDZ2 CYCSP26-201ENST00000534107 320 ntBASIC2.6□□□□□ -1.99
SIMC1Q8NDZ2 MIR4431-201ENST00000579990 94 ntBASIC2.6□□□□□ -1.99
SIMC1Q8NDZ2 AL049779.4-201ENST00000604500 156 ntBASIC2.6□□□□□ -1.99
SIMC1Q8NDZ2 FO624990.1-201ENST00000636373 85 ntBASIC2.6□□□□□ -1.99
SIMC1Q8NDZ2 AC096644.4-201ENST00000563417 2912 ntBASIC2.6□□□□□ -1.99
SIMC1Q8NDZ2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 Y_RNA.24-201ENST00000362508 103 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 U3.8-201ENST00000363675 217 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 RNU6-103P-201ENST00000363686 107 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 RNU6-899P-201ENST00000363947 107 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 Y_RNA.310-201ENST00000365063 113 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 Y_RNA.361-201ENST00000365515 120 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 DEFA7P-201ENST00000382676 285 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 RNU6-851P-201ENST00000384565 107 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 SNORA22C-201ENST00000384614 134 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 MIR548B-201ENST00000385247 97 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 RNU6-1168P-201ENST00000390831 104 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 AL355497.1-201ENST00000406262 551 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 RNU6-855P-201ENST00000410395 104 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 AC007064.1-201ENST00000412238 351 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 AC245102.2-201ENST00000448956 180 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 AC010409.1-201ENST00000487382 476 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 SCARNA8-201ENST00000515924 131 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 RNU1-104P-201ENST00000517280 175 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 MIR4319-201ENST00000577285 85 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 MIR548X2-201ENST00000579776 100 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 AL365222.1-201ENST00000614661 98 ntBASIC2.59□□□□□ -1.99
SIMC1Q8NDZ2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.58□□□□□ -2
SIMC1Q8NDZ2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SIMC1Q8NDZ2 MIR6073-201ENST00000352083 89 ntBASIC2.58□□□□□ -2
SIMC1Q8NDZ2 RNU1-23P-201ENST00000363361 144 ntBASIC2.58□□□□□ -2
SIMC1Q8NDZ2 RNA5SP393-201ENST00000363423 117 ntBASIC2.58□□□□□ -2
SIMC1Q8NDZ2 Y_RNA.341-201ENST00000365341 102 ntBASIC2.58□□□□□ -2
SIMC1Q8NDZ2 RNU1-138P-201ENST00000384093 164 ntBASIC2.58□□□□□ -2
SIMC1Q8NDZ2 RNU1-52P-201ENST00000384190 164 ntBASIC2.58□□□□□ -2
SIMC1Q8NDZ2 Y_RNA.456-201ENST00000384232 111 ntBASIC2.58□□□□□ -2
SIMC1Q8NDZ2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.58□□□□□ -2
SIMC1Q8NDZ2 AC063976.3-201ENST00000426849 329 ntBASIC2.58□□□□□ -2
SIMC1Q8NDZ2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.58□□□□□ -2
SIMC1Q8NDZ2 TRBV12-1-201ENST00000479785 344 ntBASIC2.58□□□□□ -2
SIMC1Q8NDZ2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.58□□□□□ -2
SIMC1Q8NDZ2 RNU6-453P-201ENST00000516819 85 ntBASIC2.58□□□□□ -2
SIMC1Q8NDZ2 MIR5194-201ENST00000582634 120 ntBASIC2.58□□□□□ -2
SIMC1Q8NDZ2 ZNF861P-201ENST00000588126 639 ntBASIC2.58□□□□□ -2
SIMC1Q8NDZ2 Y_RNA.802-201ENST00000614892 130 ntBASIC2.58□□□□□ -2
SIMC1Q8NDZ2 AC008873.1-201ENST00000625051 138 ntBASIC2.58□□□□□ -2
SIMC1Q8NDZ2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
SIMC1Q8NDZ2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.57□□□□□ -2
SIMC1Q8NDZ2 RNU7-141P-201ENST00000459304 62 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms