Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 Y_RNA.149-201ENST00000363558 117 ntBASIC2.54□□□□□ -2
PRPF38AQ8NAV1 Y_RNA.581-201ENST00000391017 97 ntBASIC2.54□□□□□ -2
PRPF38AQ8NAV1 MIR548F4-201ENST00000408515 105 ntBASIC2.54□□□□□ -2
PRPF38AQ8NAV1 Y_RNA.602-201ENST00000410535 92 ntBASIC2.54□□□□□ -2
PRPF38AQ8NAV1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
PRPF38AQ8NAV1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.54□□□□□ -2
PRPF38AQ8NAV1 RPS26P55-201ENST00000471178 356 ntBASIC2.54□□□□□ -2
PRPF38AQ8NAV1 HMGB3P17-201ENST00000504195 649 ntBASIC2.54□□□□□ -2
PRPF38AQ8NAV1 RNU6-1278P-201ENST00000516130 107 ntBASIC2.54□□□□□ -2
PRPF38AQ8NAV1 RNU6-436P-201ENST00000516171 114 ntBASIC2.54□□□□□ -2
PRPF38AQ8NAV1 RNU7-99P-201ENST00000516271 62 ntBASIC2.54□□□□□ -2
PRPF38AQ8NAV1 AC023157.2-201ENST00000540596 141 ntBASIC2.54□□□□□ -2
PRPF38AQ8NAV1 RPL21P9-201ENST00000556149 474 ntBASIC2.54□□□□□ -2
PRPF38AQ8NAV1 MIR6132-201ENST00000622083 109 ntBASIC2.54□□□□□ -2
PRPF38AQ8NAV1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.54□□□□□ -2
PRPF38AQ8NAV1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.54□□□□□ -2
PRPF38AQ8NAV1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.54□□□□□ -2
PRPF38AQ8NAV1 RNA5SP432-201ENST00000362480 116 ntBASIC2.53□□□□□ -2
PRPF38AQ8NAV1 SNORA33-201ENST00000363664 130 ntBASIC2.53□□□□□ -2
PRPF38AQ8NAV1 RNA5SP212-201ENST00000391223 107 ntBASIC2.53□□□□□ -2
PRPF38AQ8NAV1 EBAG9P1-201ENST00000418955 543 ntBASIC2.53□□□□□ -2
PRPF38AQ8NAV1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.53□□□□□ -2
PRPF38AQ8NAV1 DYNLT3P2-201ENST00000442517 295 ntBASIC2.53□□□□□ -2
PRPF38AQ8NAV1 HSPE1P13-201ENST00000451143 297 ntBASIC2.53□□□□□ -2
PRPF38AQ8NAV1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.53□□□□□ -2
PRPF38AQ8NAV1 RNU6-496P-201ENST00000516145 99 ntBASIC2.53□□□□□ -2
PRPF38AQ8NAV1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.53□□□□□ -2
PRPF38AQ8NAV1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.53□□□□□ -2
PRPF38AQ8NAV1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.53□□□□□ -2
PRPF38AQ8NAV1 AC008269.2-201ENST00000561915 1105 ntBASIC2.53□□□□□ -2
PRPF38AQ8NAV1 SUB1P4-201ENST00000566062 339 ntBASIC2.53□□□□□ -2
PRPF38AQ8NAV1 AC037487.3-201ENST00000606668 112 ntBASIC2.53□□□□□ -2
PRPF38AQ8NAV1 AC092881.1-201ENST00000638218 2733 ntBASIC2.52□□□□□ -2.01
PRPF38AQ8NAV1 AC010615.1-201ENST00000594254 1764 ntBASIC2.52□□□□□ -2.01
PRPF38AQ8NAV1 SNORA67.3-201ENST00000384366 140 ntBASIC2.52□□□□□ -2.01
PRPF38AQ8NAV1 Y_RNA.574-201ENST00000384766 95 ntBASIC2.52□□□□□ -2.01
PRPF38AQ8NAV1 RNU6-1186P-201ENST00000410429 97 ntBASIC2.52□□□□□ -2.01
PRPF38AQ8NAV1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
PRPF38AQ8NAV1 RNA5SP57-201ENST00000459463 123 ntBASIC2.52□□□□□ -2.01
PRPF38AQ8NAV1 RNU7-94P-201ENST00000459576 63 ntBASIC2.52□□□□□ -2.01
PRPF38AQ8NAV1 MTATP8P1-201ENST00000467115 207 ntBASIC2.52□□□□□ -2.01
PRPF38AQ8NAV1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.52□□□□□ -2.01
PRPF38AQ8NAV1 AC097462.1-201ENST00000514125 324 ntBASIC2.52□□□□□ -2.01
PRPF38AQ8NAV1 RNU7-172P-201ENST00000517125 64 ntBASIC2.52□□□□□ -2.01
PRPF38AQ8NAV1 MIR4299-201ENST00000577899 72 ntBASIC2.52□□□□□ -2.01
PRPF38AQ8NAV1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.52□□□□□ -2.01
PRPF38AQ8NAV1 AL773524.1-201ENST00000614065 229 ntBASIC2.52□□□□□ -2.01
PRPF38AQ8NAV1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
PRPF38AQ8NAV1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 Y_RNA.64-201ENST00000362845 102 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 SNORD81.1-201ENST00000363064 77 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 RNU1-22P-201ENST00000363334 158 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 Y_RNA.329-201ENST00000365209 107 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 Y_RNA.383-201ENST00000383855 97 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 RNU6-505P-201ENST00000384427 107 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 SNORA48.3-201ENST00000391081 134 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 SNORA53-201ENST00000391141 249 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 RNA5SP467-201ENST00000391274 118 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 AL023284.1-201ENST00000403956 276 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 MIR1289-2-201ENST00000408360 111 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 RNU6-121P-201ENST00000410525 99 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 RNA5SP100-201ENST00000410903 110 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 RNA5SP59-201ENST00000410922 110 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 RNU2-61P-201ENST00000411069 191 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 AC244636.1-201ENST00000421152 228 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 AL358176.2-201ENST00000425769 204 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 AC005034.5-201ENST00000604219 466 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 AC127459.3-201ENST00000624328 466 ntBASIC2.51□□□□□ -2.01
PRPF38AQ8NAV1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PRPF38AQ8NAV1 Y_RNA.105-201ENST00000363182 111 ntBASIC2.5□□□□□ -2.01
PRPF38AQ8NAV1 Y_RNA.222-201ENST00000364264 102 ntBASIC2.5□□□□□ -2.01
PRPF38AQ8NAV1 RNU6-290P-201ENST00000365212 101 ntBASIC2.5□□□□□ -2.01
PRPF38AQ8NAV1 MIR520A-201ENST00000384862 85 ntBASIC2.5□□□□□ -2.01
PRPF38AQ8NAV1 MIR562-201ENST00000384894 95 ntBASIC2.5□□□□□ -2.01
PRPF38AQ8NAV1 MIR1302-3-201ENST00000408128 138 ntBASIC2.5□□□□□ -2.01
PRPF38AQ8NAV1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.5□□□□□ -2.01
PRPF38AQ8NAV1 AC245047.4-201ENST00000433189 144 ntBASIC2.5□□□□□ -2.01
PRPF38AQ8NAV1 RPS27P21-201ENST00000486977 252 ntBASIC2.5□□□□□ -2.01
PRPF38AQ8NAV1 RNU6-1309P-201ENST00000363305 108 ntBASIC2.49□□□□□ -2.01
PRPF38AQ8NAV1 RNU6-238P-201ENST00000363313 106 ntBASIC2.49□□□□□ -2.01
PRPF38AQ8NAV1 Y_RNA.569-201ENST00000384749 103 ntBASIC2.49□□□□□ -2.01
PRPF38AQ8NAV1 RNU6-1105P-201ENST00000384774 107 ntBASIC2.49□□□□□ -2.01
PRPF38AQ8NAV1 RPS26P45-201ENST00000471748 340 ntBASIC2.49□□□□□ -2.01
PRPF38AQ8NAV1 AC010409.1-201ENST00000487382 476 ntBASIC2.49□□□□□ -2.01
PRPF38AQ8NAV1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.49□□□□□ -2.01
PRPF38AQ8NAV1 AC084364.2-201ENST00000546924 395 ntBASIC2.49□□□□□ -2.01
PRPF38AQ8NAV1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.49□□□□□ -2.01
PRPF38AQ8NAV1 AP000553.5-201ENST00000641933 54 ntBASIC2.49□□□□□ -2.01
PRPF38AQ8NAV1 Y_RNA.124-201ENST00000363339 93 ntBASIC2.48□□□□□ -2.01
PRPF38AQ8NAV1 AC009310.1-201ENST00000414414 451 ntBASIC2.48□□□□□ -2.01
PRPF38AQ8NAV1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.48□□□□□ -2.01
PRPF38AQ8NAV1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PRPF38AQ8NAV1 HSPE1P25-201ENST00000455484 251 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms