Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 TRBV12-2-201ENST00000489763 344 ntBASIC3.56□□□□□ -1.84
SIX5Q8N196 RNU7-99P-201ENST00000516271 62 ntBASIC3.56□□□□□ -1.84
SIX5Q8N196 NDUFA5P6-201ENST00000542110 379 ntBASIC3.56□□□□□ -1.84
SIX5Q8N196 MTND5P34-201ENST00000568888 325 ntBASIC3.56□□□□□ -1.84
SIX5Q8N196 RNVU1-4-201ENST00000612985 164 ntBASIC3.56□□□□□ -1.84
SIX5Q8N196 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SIX5Q8N196 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
SIX5Q8N196 Z83843.1-201ENST00000604070 3685 ntBASIC3.56□□□□□ -1.84
SIX5Q8N196 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SIX5Q8N196 AL391516.1-201ENST00000554380 2449 ntBASIC3.55□□□□□ -1.84
SIX5Q8N196 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SIX5Q8N196 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SIX5Q8N196 RNU1-96P-201ENST00000364163 162 ntBASIC3.55□□□□□ -1.84
SIX5Q8N196 AL158823.1-201ENST00000418441 478 ntBASIC3.55□□□□□ -1.84
SIX5Q8N196 HMGN1P7-201ENST00000491722 313 ntBASIC3.55□□□□□ -1.84
SIX5Q8N196 RNU6-1061P-201ENST00000516530 99 ntBASIC3.55□□□□□ -1.84
SIX5Q8N196 Y_RNA.690-201ENST00000516603 95 ntBASIC3.55□□□□□ -1.84
SIX5Q8N196 RMST_8.1-201ENST00000610287 165 ntBASIC3.55□□□□□ -1.84
SIX5Q8N196 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.55□□□□□ -1.84
SIX5Q8N196 SNORA50A-202ENST00000629536 136 ntBASIC3.55□□□□□ -1.84
SIX5Q8N196 U6.95-201ENST00000636931 70 ntBASIC3.55□□□□□ -1.84
SIX5Q8N196 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SIX5Q8N196 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SIX5Q8N196 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SIX5Q8N196 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SIX5Q8N196 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SIX5Q8N196 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.54□□□□□ -1.84
SIX5Q8N196 RNU6-220P-201ENST00000390919 107 ntBASIC3.54□□□□□ -1.84
SIX5Q8N196 RNA5SP323-201ENST00000391094 133 ntBASIC3.54□□□□□ -1.84
SIX5Q8N196 RNU2-48P-201ENST00000410694 191 ntBASIC3.54□□□□□ -1.84
SIX5Q8N196 RNA5SP127-201ENST00000411051 133 ntBASIC3.54□□□□□ -1.84
SIX5Q8N196 SNRPGP10-201ENST00000432323 225 ntBASIC3.54□□□□□ -1.84
SIX5Q8N196 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.54□□□□□ -1.84
SIX5Q8N196 RNU6-1041P-201ENST00000516254 102 ntBASIC3.54□□□□□ -1.84
SIX5Q8N196 RNU6-1291P-201ENST00000516591 104 ntBASIC3.54□□□□□ -1.84
SIX5Q8N196 RNU1-104P-201ENST00000517280 175 ntBASIC3.54□□□□□ -1.84
SIX5Q8N196 MIR3616-201ENST00000584070 92 ntBASIC3.54□□□□□ -1.84
SIX5Q8N196 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SIX5Q8N196 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SIX5Q8N196 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SIX5Q8N196 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
SIX5Q8N196 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.53□□□□□ -1.84
SIX5Q8N196 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
SIX5Q8N196 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SIX5Q8N196 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SIX5Q8N196 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SIX5Q8N196 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SIX5Q8N196 MIR340-201ENST00000362125 95 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 MIR422A-201ENST00000362286 90 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 SNORA5B-201ENST00000363786 132 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 RNU6-153P-201ENST00000364422 104 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 Y_RNA.267-201ENST00000364679 109 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 RNU6-1144P-201ENST00000384247 104 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 RNU6-301P-201ENST00000384277 107 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 Y_RNA.486-201ENST00000384398 107 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 MIR592-201ENST00000384959 97 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 RN7SKP284-201ENST00000411002 343 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 EDDM3CP-201ENST00000415977 425 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 AL158147.1-201ENST00000443970 75 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 RNU6-504P-201ENST00000516568 104 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 RNU1-142P-201ENST00000516682 145 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.53□□□□□ -1.84
SIX5Q8N196 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.53□□□□□ -1.84
SIX5Q8N196 MIR7106-201ENST00000612419 65 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 MIR6129-201ENST00000616087 109 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 MIR3914-2-201ENST00000637339 95 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 MIR7153-201ENST00000637758 57 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SIX5Q8N196 MAPK10-373ENST00000641983 6772 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 AC018630.2-201ENST00000534866 2403 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 AC245060.5-201ENST00000610778 3293 ntBASIC3.53□□□□□ -1.84
SIX5Q8N196 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.53□□□□□ -1.84
SIX5Q8N196 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SIX5Q8N196 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SIX5Q8N196 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SIX5Q8N196 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.52□□□□□ -1.85
SIX5Q8N196 AL021368.2-201ENST00000606125 5352 ntBASIC3.52□□□□□ -1.85
SIX5Q8N196 Y_RNA.114-201ENST00000363265 113 ntBASIC3.52□□□□□ -1.85
SIX5Q8N196 AL603914.1-201ENST00000401964 204 ntBASIC3.52□□□□□ -1.85
SIX5Q8N196 AL031121.1-201ENST00000406553 254 ntBASIC3.52□□□□□ -1.85
SIX5Q8N196 SRIP3-201ENST00000413200 219 ntBASIC3.52□□□□□ -1.85
SIX5Q8N196 NDUFB1P1-201ENST00000435191 180 ntBASIC3.52□□□□□ -1.85
SIX5Q8N196 AL353689.1-201ENST00000438895 199 ntBASIC3.52□□□□□ -1.85
SIX5Q8N196 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX5Q8N196 Y_RNA.714-201ENST00000517065 90 ntBASIC3.52□□□□□ -1.85
SIX5Q8N196 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SIX5Q8N196 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SIX5Q8N196 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SIX5Q8N196 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.51□□□□□ -1.85
SIX5Q8N196 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SIX5Q8N196 Y_RNA.99-201ENST00000363138 105 ntBASIC3.51□□□□□ -1.85
SIX5Q8N196 RNU6-647P-201ENST00000364243 107 ntBASIC3.51□□□□□ -1.85
SIX5Q8N196 Y_RNA.242-201ENST00000364473 110 ntBASIC3.51□□□□□ -1.85
SIX5Q8N196 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.51□□□□□ -1.85
SIX5Q8N196 MTATP6P21-201ENST00000440681 189 ntBASIC3.51□□□□□ -1.85
SIX5Q8N196 AC006483.1-201ENST00000487308 313 ntBASIC3.51□□□□□ -1.85
SIX5Q8N196 MIR3121-201ENST00000579680 77 ntBASIC3.51□□□□□ -1.85
SIX5Q8N196 AC006023.1-201ENST00000603944 259 ntBASIC3.51□□□□□ -1.85
SIX5Q8N196 MIR6079-201ENST00000635807 62 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms