Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC105029.1-201ENST00000520250 669 ntBASIC0.87□□□□□ -2.27
NUDCD3Q8IVD9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.87□□□□□ -2.27
NUDCD3Q8IVD9 AP002004.2-201ENST00000531656 154 ntBASIC0.87□□□□□ -2.27
NUDCD3Q8IVD9 MIR3684-201ENST00000579779 74 ntBASIC0.87□□□□□ -2.27
NUDCD3Q8IVD9 AC013244.2-201ENST00000603396 103 ntBASIC0.87□□□□□ -2.27
NUDCD3Q8IVD9 AC104260.1-201ENST00000616660 539 ntBASIC0.87□□□□□ -2.27
NUDCD3Q8IVD9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.87□□□□□ -2.27
NUDCD3Q8IVD9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.86□□□□□ -2.27
NUDCD3Q8IVD9 RNY1P16-201ENST00000363063 111 ntBASIC0.86□□□□□ -2.27
NUDCD3Q8IVD9 SNORA2.2-201ENST00000365473 135 ntBASIC0.86□□□□□ -2.27
NUDCD3Q8IVD9 Y_RNA.363-201ENST00000365529 113 ntBASIC0.86□□□□□ -2.27
NUDCD3Q8IVD9 MIR19B1-201ENST00000384829 87 ntBASIC0.86□□□□□ -2.27
NUDCD3Q8IVD9 MIR562-201ENST00000384894 95 ntBASIC0.86□□□□□ -2.27
NUDCD3Q8IVD9 AC074085.1-201ENST00000413598 418 ntBASIC0.86□□□□□ -2.27
NUDCD3Q8IVD9 AL353997.1-201ENST00000432936 108 ntBASIC0.86□□□□□ -2.27
NUDCD3Q8IVD9 AL137792.2-201ENST00000443484 235 ntBASIC0.86□□□□□ -2.27
NUDCD3Q8IVD9 AC022493.2-201ENST00000506122 481 ntBASIC0.86□□□□□ -2.27
NUDCD3Q8IVD9 RNU7-12P-201ENST00000516030 62 ntBASIC0.86□□□□□ -2.27
NUDCD3Q8IVD9 Y_RNA.670-201ENST00000516255 105 ntBASIC0.86□□□□□ -2.27
NUDCD3Q8IVD9 RNU7-28P-201ENST00000516759 62 ntBASIC0.86□□□□□ -2.27
NUDCD3Q8IVD9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.86□□□□□ -2.27
NUDCD3Q8IVD9 AP002001.1-203ENST00000534002 267 ntBASIC0.86□□□□□ -2.27
NUDCD3Q8IVD9 AC018448.1-201ENST00000552843 316 ntBASIC0.86□□□□□ -2.27
NUDCD3Q8IVD9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.86□□□□□ -2.27
NUDCD3Q8IVD9 AC018638.8-201ENST00000588755 281 ntBASIC0.86□□□□□ -2.27
NUDCD3Q8IVD9 AC090517.2-201ENST00000614966 680 ntBASIC0.86□□□□□ -2.27
NUDCD3Q8IVD9 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 Y_RNA.498-201ENST00000384460 102 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 MIR548F5-201ENST00000408421 86 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 MIR548F1-201ENST00000408667 84 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 RNU6-1050P-201ENST00000410388 107 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 RNU6-321P-201ENST00000410912 106 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 AC063976.4-201ENST00000421971 163 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 MTCYBP10-201ENST00000424905 650 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 RPS3AP52-201ENST00000435639 297 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 AC104332.1-201ENST00000440471 797 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 PCNPP5-201ENST00000452246 481 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 HMGN1P7-201ENST00000491722 313 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 AC074133.1-201ENST00000515696 183 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 RNU6-322P-201ENST00000516010 103 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 SNORD79.1-201ENST00000516069 84 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 ACA64.5-201ENST00000516207 127 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 AC022868.1-201ENST00000517767 391 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 MIR4661-201ENST00000582720 75 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 AL117336.2-201ENST00000602435 335 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 BNIP3P10-201ENST00000605360 577 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 U6.115-201ENST00000636045 103 ntBASIC0.85□□□□□ -2.27
NUDCD3Q8IVD9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.27
NUDCD3Q8IVD9 MIRLET7C-201ENST00000362160 84 ntBASIC0.84□□□□□ -2.27
NUDCD3Q8IVD9 Y_RNA.86-201ENST00000363020 111 ntBASIC0.84□□□□□ -2.27
NUDCD3Q8IVD9 Y_RNA.124-201ENST00000363339 93 ntBASIC0.84□□□□□ -2.27
NUDCD3Q8IVD9 RNU6-454P-201ENST00000364292 107 ntBASIC0.84□□□□□ -2.27
NUDCD3Q8IVD9 RNU1-36P-201ENST00000365130 165 ntBASIC0.84□□□□□ -2.27
NUDCD3Q8IVD9 Y_RNA.358-201ENST00000365491 99 ntBASIC0.84□□□□□ -2.27
NUDCD3Q8IVD9 RNU6-1215P-201ENST00000384441 102 ntBASIC0.84□□□□□ -2.27
NUDCD3Q8IVD9 RNA5SP482-201ENST00000391269 118 ntBASIC0.84□□□□□ -2.27
NUDCD3Q8IVD9 MIR548K-201ENST00000408406 116 ntBASIC0.84□□□□□ -2.27
NUDCD3Q8IVD9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.84□□□□□ -2.27
NUDCD3Q8IVD9 POLR2J4-204ENST00000418424 324 ntBASIC0.84□□□□□ -2.27
NUDCD3Q8IVD9 AC002429.1-201ENST00000437672 148 ntBASIC0.84□□□□□ -2.27
NUDCD3Q8IVD9 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.84□□□□□ -2.27
NUDCD3Q8IVD9 RNU6-1278P-201ENST00000516130 107 ntBASIC0.84□□□□□ -2.27
NUDCD3Q8IVD9 RNU6-718P-201ENST00000516166 105 ntBASIC0.84□□□□□ -2.27
NUDCD3Q8IVD9 SCARNA16.2-201ENST00000516520 172 ntBASIC0.84□□□□□ -2.27
NUDCD3Q8IVD9 AC127459.3-201ENST00000624328 466 ntBASIC0.84□□□□□ -2.27
NUDCD3Q8IVD9 MIR410-201ENST00000362222 80 ntBASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 RNU6-117P-201ENST00000365415 107 ntBASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 RNU6-510P-201ENST00000391239 108 ntBASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 MIR873-201ENST00000401120 77 ntBASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 RNU5A-5P-201ENST00000411054 116 ntBASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 UBE2V1P7-201ENST00000446395 340 ntBASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 AC233266.1-201ENST00000454518 96 ntBASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 Y_RNA.638-201ENST00000459374 113 ntBASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 RNU6-625P-201ENST00000459412 107 ntBASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 SNORD124-201ENST00000459577 104 ntBASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 RPL7P42-201ENST00000481005 679 ntBASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 RNU6-1116P-201ENST00000517269 99 ntBASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 AL357312.1-201ENST00000603879 298 ntBASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 AC009229.3-201ENST00000608056 282 ntBASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 AC242852.1-201ENST00000612151 96 ntBASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 AC244015.1-201ENST00000622301 99 ntBASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 MIR3674-201ENST00000636576 68 ntBASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
NUDCD3Q8IVD9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.82□□□□□ -2.28
NUDCD3Q8IVD9 MIR337-201ENST00000362281 93 ntBASIC0.82□□□□□ -2.28
NUDCD3Q8IVD9 RNY1P10-201ENST00000363268 113 ntBASIC0.82□□□□□ -2.28
NUDCD3Q8IVD9 SNORD114-27-201ENST00000363766 70 ntBASIC0.82□□□□□ -2.28
NUDCD3Q8IVD9 RNU6-593P-201ENST00000364716 112 ntBASIC0.82□□□□□ -2.28
NUDCD3Q8IVD9 RNU6-318P-201ENST00000384283 103 ntBASIC0.82□□□□□ -2.28
NUDCD3Q8IVD9 RNU6-136P-201ENST00000384663 107 ntBASIC0.82□□□□□ -2.28
NUDCD3Q8IVD9 SNORD116-4-201ENST00000384733 96 ntBASIC0.82□□□□□ -2.28
NUDCD3Q8IVD9 SNORD12-201ENST00000391002 90 ntBASIC0.82□□□□□ -2.28
NUDCD3Q8IVD9 AC006461.1-201ENST00000412637 326 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms