Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL672296.1-201ENST00000427780 2158 ntBASIC3.02□□□□□ -1.93
ATG4DQ86TL0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.02□□□□□ -1.93
ATG4DQ86TL0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
ATG4DQ86TL0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.01□□□□□ -1.93
ATG4DQ86TL0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
ATG4DQ86TL0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
ATG4DQ86TL0 RNU1-70P-201ENST00000362618 164 ntBASIC3.01□□□□□ -1.93
ATG4DQ86TL0 RNU6-228P-201ENST00000362700 106 ntBASIC3.01□□□□□ -1.93
ATG4DQ86TL0 SNORD77.3-201ENST00000391113 65 ntBASIC3.01□□□□□ -1.93
ATG4DQ86TL0 RNU6-972P-201ENST00000391208 107 ntBASIC3.01□□□□□ -1.93
ATG4DQ86TL0 AC008134.1-201ENST00000420943 193 ntBASIC3.01□□□□□ -1.93
ATG4DQ86TL0 AC005326.1-201ENST00000429197 123 ntBASIC3.01□□□□□ -1.93
ATG4DQ86TL0 AC010099.1-201ENST00000455434 375 ntBASIC3.01□□□□□ -1.93
ATG4DQ86TL0 Y_RNA.666-201ENST00000516187 112 ntBASIC3.01□□□□□ -1.93
ATG4DQ86TL0 RNY4P20-201ENST00000516678 93 ntBASIC3.01□□□□□ -1.93
ATG4DQ86TL0 RNU7-172P-201ENST00000517125 64 ntBASIC3.01□□□□□ -1.93
ATG4DQ86TL0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.01□□□□□ -1.93
ATG4DQ86TL0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.01□□□□□ -1.93
ATG4DQ86TL0 uc_338.1-201ENST00000612113 180 ntBASIC3.01□□□□□ -1.93
ATG4DQ86TL0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.01□□□□□ -1.93
ATG4DQ86TL0 MIR376A2-201ENST00000636782 80 ntBASIC3.01□□□□□ -1.93
ATG4DQ86TL0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
ATG4DQ86TL0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ATG4DQ86TL0 AC073346.2-201ENST00000624724 2058 ntBASIC3□□□□□ -1.93
ATG4DQ86TL0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3□□□□□ -1.93
ATG4DQ86TL0 RNU6-198P-201ENST00000384258 104 ntBASIC3□□□□□ -1.93
ATG4DQ86TL0 AP000567.1-201ENST00000406413 156 ntBASIC3□□□□□ -1.93
ATG4DQ86TL0 Y_RNA.621-201ENST00000411065 96 ntBASIC3□□□□□ -1.93
ATG4DQ86TL0 UBE2Q2P12-201ENST00000414573 204 ntBASIC3□□□□□ -1.93
ATG4DQ86TL0 AL513477.1-202ENST00000417061 214 ntBASIC3□□□□□ -1.93
ATG4DQ86TL0 Z98742.2-201ENST00000431564 187 ntBASIC3□□□□□ -1.93
ATG4DQ86TL0 AC115115.1-201ENST00000449927 248 ntBASIC3□□□□□ -1.93
ATG4DQ86TL0 AC097462.1-201ENST00000514125 324 ntBASIC3□□□□□ -1.93
ATG4DQ86TL0 RNU6-904P-201ENST00000516206 101 ntBASIC3□□□□□ -1.93
ATG4DQ86TL0 RNU6-948P-201ENST00000516374 107 ntBASIC3□□□□□ -1.93
ATG4DQ86TL0 SNORA74D-201ENST00000516404 141 ntBASIC3□□□□□ -1.93
ATG4DQ86TL0 AC109329.2-201ENST00000519658 482 ntBASIC3□□□□□ -1.93
ATG4DQ86TL0 AC104027.1-201ENST00000521887 300 ntBASIC3□□□□□ -1.93
ATG4DQ86TL0 AP000867.2-201ENST00000532468 320 ntBASIC3□□□□□ -1.93
ATG4DQ86TL0 MIR4438-201ENST00000585271 93 ntBASIC3□□□□□ -1.93
ATG4DQ86TL0 AC006435.5-201ENST00000624486 112 ntBASIC3□□□□□ -1.93
ATG4DQ86TL0 AC073476.4-201ENST00000628409 72 ntBASIC3□□□□□ -1.93
ATG4DQ86TL0 MIR3651-201ENST00000630427 90 ntBASIC3□□□□□ -1.93
ATG4DQ86TL0 MIR2052-201ENST00000636055 55 ntBASIC3□□□□□ -1.93
ATG4DQ86TL0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3□□□□□ -1.93
ATG4DQ86TL0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3□□□□□ -1.93
ATG4DQ86TL0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ATG4DQ86TL0 AL021368.2-201ENST00000606125 5352 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.99□□□□□ -1.93
ATG4DQ86TL0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATG4DQ86TL0 RNU6-486P-201ENST00000363116 107 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 Y_RNA.213-201ENST00000364178 111 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 RNU6-1240P-201ENST00000365155 104 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 RNU6-234P-201ENST00000365229 104 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 Y_RNA.344-201ENST00000365381 112 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 RNU6-1124P-201ENST00000384169 107 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 MIR1294-201ENST00000408503 142 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 Y_RNA.593-201ENST00000410292 98 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 RNA5SP229-201ENST00000410809 99 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 RNA5SP120-201ENST00000410900 112 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 EIF4EP4-201ENST00000424916 578 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 CST9LP2-201ENST00000437612 320 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 AL445687.1-201ENST00000439946 251 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 RN7SL601P-201ENST00000471221 293 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 RN7SL442P-201ENST00000473804 320 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.99□□□□□ -1.93
ATG4DQ86TL0 RNU6-693P-201ENST00000516134 107 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 RNU6-158P-201ENST00000517104 100 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.99□□□□□ -1.93
ATG4DQ86TL0 MIR4276-201ENST00000584832 70 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.99□□□□□ -1.93
ATG4DQ86TL0 SNORA50A-202ENST00000629536 136 ntBASIC2.99□□□□□ -1.93
ATG4DQ86TL0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATG4DQ86TL0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ATG4DQ86TL0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ATG4DQ86TL0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
ATG4DQ86TL0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ATG4DQ86TL0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.98□□□□□ -1.93
ATG4DQ86TL0 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.98□□□□□ -1.93
ATG4DQ86TL0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.98□□□□□ -1.93
ATG4DQ86TL0 RNU6-888P-201ENST00000363010 101 ntBASIC2.98□□□□□ -1.93
ATG4DQ86TL0 RNU6-944P-201ENST00000364023 107 ntBASIC2.98□□□□□ -1.93
ATG4DQ86TL0 MIR548A2-201ENST00000384956 97 ntBASIC2.98□□□□□ -1.93
ATG4DQ86TL0 RNU7-23P-201ENST00000459465 62 ntBASIC2.98□□□□□ -1.93
ATG4DQ86TL0 RPL30P14-201ENST00000482744 348 ntBASIC2.98□□□□□ -1.93
ATG4DQ86TL0 SCARNA20.6-201ENST00000517251 106 ntBASIC2.98□□□□□ -1.93
ATG4DQ86TL0 AC084364.2-201ENST00000546924 395 ntBASIC2.98□□□□□ -1.93
ATG4DQ86TL0 MIR5195-201ENST00000583555 115 ntBASIC2.98□□□□□ -1.93
ATG4DQ86TL0 MIR7112-201ENST00000616126 65 ntBASIC2.98□□□□□ -1.93
ATG4DQ86TL0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
ATG4DQ86TL0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.98□□□□□ -1.93
ATG4DQ86TL0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
ATG4DQ86TL0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
ATG4DQ86TL0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
ATG4DQ86TL0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ATG4DQ86TL0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ATG4DQ86TL0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
ATG4DQ86TL0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
ATG4DQ86TL0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms