Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC079804.2-201ENST00000490376 200 ntBASIC2.4□□□□□ -2.03
KRT28Q7Z3Y7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.4□□□□□ -2.03
KRT28Q7Z3Y7 AC055872.1-201ENST00000570978 278 ntBASIC2.4□□□□□ -2.03
KRT28Q7Z3Y7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.4□□□□□ -2.03
KRT28Q7Z3Y7 MIR4300-201ENST00000581016 96 ntBASIC2.4□□□□□ -2.03
KRT28Q7Z3Y7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.4□□□□□ -2.03
KRT28Q7Z3Y7 SNORD14A-201ENST00000606526 91 ntBASIC2.4□□□□□ -2.03
KRT28Q7Z3Y7 AL512598.1-201ENST00000610158 273 ntBASIC2.4□□□□□ -2.03
KRT28Q7Z3Y7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.4□□□□□ -2.03
KRT28Q7Z3Y7 AC006001.4-201ENST00000622243 395 ntBASIC2.4□□□□□ -2.03
KRT28Q7Z3Y7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
KRT28Q7Z3Y7 Y_RNA.149-201ENST00000363558 117 ntBASIC2.39□□□□□ -2.03
KRT28Q7Z3Y7 RNU1-52P-201ENST00000384190 164 ntBASIC2.39□□□□□ -2.03
KRT28Q7Z3Y7 AC008134.1-201ENST00000420943 193 ntBASIC2.39□□□□□ -2.03
KRT28Q7Z3Y7 LINC01399-202ENST00000458450 244 ntBASIC2.39□□□□□ -2.03
KRT28Q7Z3Y7 RNU6-221P-201ENST00000459541 99 ntBASIC2.39□□□□□ -2.03
KRT28Q7Z3Y7 RNA5SP137-201ENST00000516833 135 ntBASIC2.39□□□□□ -2.03
KRT28Q7Z3Y7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.39□□□□□ -2.03
KRT28Q7Z3Y7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.39□□□□□ -2.03
KRT28Q7Z3Y7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.39□□□□□ -2.03
KRT28Q7Z3Y7 AL159152.1-201ENST00000635019 2587 ntBASIC2.39□□□□□ -2.03
KRT28Q7Z3Y7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRT28Q7Z3Y7 Y_RNA.26-201ENST00000362539 101 ntBASIC2.38□□□□□ -2.03
KRT28Q7Z3Y7 Y_RNA.64-201ENST00000362845 102 ntBASIC2.38□□□□□ -2.03
KRT28Q7Z3Y7 RNA5SP325-201ENST00000363756 130 ntBASIC2.38□□□□□ -2.03
KRT28Q7Z3Y7 RNU6-806P-201ENST00000365147 105 ntBASIC2.38□□□□□ -2.03
KRT28Q7Z3Y7 MIR1253-201ENST00000408273 105 ntBASIC2.38□□□□□ -2.03
KRT28Q7Z3Y7 MIR1276-201ENST00000408707 83 ntBASIC2.38□□□□□ -2.03
KRT28Q7Z3Y7 Y_RNA.602-201ENST00000410535 92 ntBASIC2.38□□□□□ -2.03
KRT28Q7Z3Y7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.38□□□□□ -2.03
KRT28Q7Z3Y7 AL590240.4-201ENST00000616908 390 ntBASIC2.38□□□□□ -2.03
KRT28Q7Z3Y7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.38□□□□□ -2.03
KRT28Q7Z3Y7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
KRT28Q7Z3Y7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
KRT28Q7Z3Y7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 Y_RNA.47-201ENST00000362697 108 ntBASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 Y_RNA.101-201ENST00000363154 102 ntBASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 RNU6-23P-201ENST00000363283 107 ntBASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 SNORD113-8-201ENST00000363497 74 ntBASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 SNORD114-6-201ENST00000364393 72 ntBASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 Y_RNA.331-201ENST00000365267 102 ntBASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 Y_RNA.361-201ENST00000365515 120 ntBASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 SNORA40.19-201ENST00000390846 128 ntBASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 RNU4-30P-201ENST00000410245 143 ntBASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 SEPT14P8-201ENST00000508026 178 ntBASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 RNU6-155P-201ENST00000516347 100 ntBASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 RNU1-40P-201ENST00000516816 164 ntBASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 RNU1-97P-201ENST00000516872 164 ntBASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 AC025647.1-201ENST00000517879 253 ntBASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 AL161670.1-201ENST00000554348 137 ntBASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 MIR6504-201ENST00000613520 61 ntBASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.37□□□□□ -2.03
KRT28Q7Z3Y7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 AL596028.1-201ENST00000326971 197 ntBASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 RNU6-324P-201ENST00000363957 106 ntBASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 RNU6-454P-201ENST00000364292 107 ntBASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 RNU6-1240P-201ENST00000365155 104 ntBASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 Y_RNA.446-201ENST00000384178 104 ntBASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 Y_RNA.512-201ENST00000384518 102 ntBASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 MIR613-201ENST00000385248 95 ntBASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 Y_RNA.581-201ENST00000391017 97 ntBASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 RNU6-1199P-201ENST00000411249 104 ntBASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 RNU6-856P-201ENST00000516959 98 ntBASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 RNU2-12P-201ENST00000517216 168 ntBASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 AP005660.1-201ENST00000522972 293 ntBASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 AP003733.2-201ENST00000529409 171 ntBASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 AC022441.3-201ENST00000605737 136 ntBASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 AC005828.6-201ENST00000606610 232 ntBASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 SNORD113-5-201ENST00000607261 78 ntBASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 MIR6840-201ENST00000611937 71 ntBASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 AC127459.3-201ENST00000624328 466 ntBASIC2.36□□□□□ -2.03
KRT28Q7Z3Y7 AC005336.3-201ENST00000623833 2679 ntBASIC2.35□□□□□ -2.03
KRT28Q7Z3Y7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.35□□□□□ -2.03
KRT28Q7Z3Y7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
KRT28Q7Z3Y7 SNORA3A-201ENST00000364113 130 ntBASIC2.35□□□□□ -2.03
KRT28Q7Z3Y7 RNA5SP493-201ENST00000364115 91 ntBASIC2.35□□□□□ -2.03
KRT28Q7Z3Y7 Y_RNA.222-201ENST00000364264 102 ntBASIC2.35□□□□□ -2.03
KRT28Q7Z3Y7 RNU6-1164P-201ENST00000364428 107 ntBASIC2.35□□□□□ -2.03
KRT28Q7Z3Y7 SNORA16.1-201ENST00000364597 132 ntBASIC2.35□□□□□ -2.03
KRT28Q7Z3Y7 RNU6-472P-201ENST00000384299 107 ntBASIC2.35□□□□□ -2.03
KRT28Q7Z3Y7 RNU11-3P-201ENST00000391111 133 ntBASIC2.35□□□□□ -2.03
KRT28Q7Z3Y7 MIR1302-3-201ENST00000408128 138 ntBASIC2.35□□□□□ -2.03
KRT28Q7Z3Y7 RNU2-54P-201ENST00000410299 190 ntBASIC2.35□□□□□ -2.03
KRT28Q7Z3Y7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.35□□□□□ -2.03
KRT28Q7Z3Y7 AC005042.3-201ENST00000453230 174 ntBASIC2.35□□□□□ -2.03
KRT28Q7Z3Y7 RNU1-131P-201ENST00000458943 161 ntBASIC2.35□□□□□ -2.03
KRT28Q7Z3Y7 RNU6-966P-201ENST00000516479 104 ntBASIC2.35□□□□□ -2.03
KRT28Q7Z3Y7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.35□□□□□ -2.03
KRT28Q7Z3Y7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.35□□□□□ -2.03
KRT28Q7Z3Y7 MIR3684-201ENST00000579779 74 ntBASIC2.35□□□□□ -2.03
KRT28Q7Z3Y7 AL645939.4-201ENST00000604495 135 ntBASIC2.35□□□□□ -2.03
KRT28Q7Z3Y7 MIR8062-201ENST00000621515 85 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms