Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AL159152.1-201ENST00000635019 2587 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 RNU6-1272P-201ENST00000362776 107 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 RNU6-324P-201ENST00000363957 106 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 RNU2-2P-201ENST00000410396 191 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 MTND5P15-201ENST00000434246 349 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 CKS1BP2-201ENST00000497342 240 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 Y_RNA.679-201ENST00000516416 91 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 RNU2-34P-201ENST00000516534 121 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 U2.15-201ENST00000611544 191 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 U2.16-201ENST00000613119 191 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 U2.12-201ENST00000613778 191 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 U2.20-201ENST00000613956 192 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 U2.9-201ENST00000615427 191 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 U2.11-201ENST00000616345 191 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 U2.2-201ENST00000616535 191 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 U2.3-201ENST00000617785 191 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 AL449363.1-201ENST00000617815 186 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 U2.19-201ENST00000618602 191 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 RNU2-1-201ENST00000618664 191 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 U2.6-201ENST00000619225 191 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 U2.5-201ENST00000619465 191 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 U2.10-201ENST00000620268 191 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 MIR7843-201ENST00000622274 79 ntBASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
UBE3BQ7Z3V4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
UBE3BQ7Z3V4 RNU6-1235P-201ENST00000384559 107 ntBASIC2.62□□□□□ -1.99
UBE3BQ7Z3V4 AL357139.1-201ENST00000407792 426 ntBASIC2.62□□□□□ -1.99
UBE3BQ7Z3V4 RNU6-710P-201ENST00000410424 105 ntBASIC2.62□□□□□ -1.99
UBE3BQ7Z3V4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
UBE3BQ7Z3V4 RNU6-498P-201ENST00000459468 107 ntBASIC2.62□□□□□ -1.99
UBE3BQ7Z3V4 RNU6-948P-201ENST00000516374 107 ntBASIC2.62□□□□□ -1.99
UBE3BQ7Z3V4 PRELID2P1-201ENST00000552837 301 ntBASIC2.62□□□□□ -1.99
UBE3BQ7Z3V4 MIR5194-201ENST00000582634 120 ntBASIC2.62□□□□□ -1.99
UBE3BQ7Z3V4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.62□□□□□ -1.99
UBE3BQ7Z3V4 AC004792.1-201ENST00000614523 137 ntBASIC2.62□□□□□ -1.99
UBE3BQ7Z3V4 AL078604.3-201ENST00000615580 211 ntBASIC2.62□□□□□ -1.99
UBE3BQ7Z3V4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.62□□□□□ -1.99
UBE3BQ7Z3V4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
UBE3BQ7Z3V4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.61□□□□□ -1.99
UBE3BQ7Z3V4 Y_RNA.332-201ENST00000365271 113 ntBASIC2.61□□□□□ -1.99
UBE3BQ7Z3V4 MIR504-201ENST00000385065 83 ntBASIC2.61□□□□□ -1.99
UBE3BQ7Z3V4 MIR561-201ENST00000385216 97 ntBASIC2.61□□□□□ -1.99
UBE3BQ7Z3V4 AL445646.1-201ENST00000431784 216 ntBASIC2.61□□□□□ -1.99
UBE3BQ7Z3V4 AL135790.2-201ENST00000437701 267 ntBASIC2.61□□□□□ -1.99
UBE3BQ7Z3V4 Y_RNA.644-201ENST00000459006 113 ntBASIC2.61□□□□□ -1.99
UBE3BQ7Z3V4 AC018868.1-201ENST00000491307 315 ntBASIC2.61□□□□□ -1.99
UBE3BQ7Z3V4 AC093259.1-201ENST00000509755 300 ntBASIC2.61□□□□□ -1.99
UBE3BQ7Z3V4 SNORA70.12-201ENST00000516084 153 ntBASIC2.61□□□□□ -1.99
UBE3BQ7Z3V4 Y_RNA.674-201ENST00000516362 113 ntBASIC2.61□□□□□ -1.99
UBE3BQ7Z3V4 RNA5SP490-201ENST00000517141 136 ntBASIC2.61□□□□□ -1.99
UBE3BQ7Z3V4 AC136628.3-201ENST00000521868 290 ntBASIC2.61□□□□□ -1.99
UBE3BQ7Z3V4 AC009127.3-201ENST00000570531 403 ntBASIC2.61□□□□□ -1.99
UBE3BQ7Z3V4 Z83818.1-201ENST00000603584 150 ntBASIC2.61□□□□□ -1.99
UBE3BQ7Z3V4 AL355297.2-201ENST00000604792 129 ntBASIC2.61□□□□□ -1.99
UBE3BQ7Z3V4 FTX_2.1-201ENST00000618816 94 ntBASIC2.61□□□□□ -1.99
UBE3BQ7Z3V4 snoU18.1-201ENST00000629629 71 ntBASIC2.61□□□□□ -1.99
UBE3BQ7Z3V4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.61□□□□□ -1.99
UBE3BQ7Z3V4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
UBE3BQ7Z3V4 Y_RNA.368-201ENST00000365547 113 ntBASIC2.6□□□□□ -1.99
UBE3BQ7Z3V4 RNU6-438P-201ENST00000365561 103 ntBASIC2.6□□□□□ -1.99
UBE3BQ7Z3V4 AL355796.1-201ENST00000406706 323 ntBASIC2.6□□□□□ -1.99
UBE3BQ7Z3V4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.6□□□□□ -1.99
UBE3BQ7Z3V4 MTCO1P44-201ENST00000441935 243 ntBASIC2.6□□□□□ -1.99
UBE3BQ7Z3V4 AC016717.1-201ENST00000448918 286 ntBASIC2.6□□□□□ -1.99
UBE3BQ7Z3V4 AL137159.1-201ENST00000452808 512 ntBASIC2.6□□□□□ -1.99
UBE3BQ7Z3V4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.6□□□□□ -1.99
UBE3BQ7Z3V4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
UBE3BQ7Z3V4 MIR4446-201ENST00000578505 67 ntBASIC2.6□□□□□ -1.99
UBE3BQ7Z3V4 AL008718.3-201ENST00000610217 321 ntBASIC2.6□□□□□ -1.99
UBE3BQ7Z3V4 Y_RNA.783-201ENST00000613546 102 ntBASIC2.6□□□□□ -1.99
UBE3BQ7Z3V4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
UBE3BQ7Z3V4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.6□□□□□ -1.99
UBE3BQ7Z3V4 SNORA38-201ENST00000363946 132 ntBASIC2.59□□□□□ -1.99
UBE3BQ7Z3V4 RNU6-801P-201ENST00000364087 105 ntBASIC2.59□□□□□ -1.99
UBE3BQ7Z3V4 Y_RNA.304-201ENST00000365011 112 ntBASIC2.59□□□□□ -1.99
UBE3BQ7Z3V4 RNU6-211P-201ENST00000384047 107 ntBASIC2.59□□□□□ -1.99
UBE3BQ7Z3V4 Y_RNA.555-201ENST00000384673 110 ntBASIC2.59□□□□□ -1.99
UBE3BQ7Z3V4 MIR873-201ENST00000401120 77 ntBASIC2.59□□□□□ -1.99
UBE3BQ7Z3V4 PIGPP3-201ENST00000425307 415 ntBASIC2.59□□□□□ -1.99
UBE3BQ7Z3V4 PRELID3BP1-201ENST00000457142 540 ntBASIC2.59□□□□□ -1.99
UBE3BQ7Z3V4 SNORD65B-201ENST00000459126 73 ntBASIC2.59□□□□□ -1.99
UBE3BQ7Z3V4 Y_RNA.637-201ENST00000459424 114 ntBASIC2.59□□□□□ -1.99
UBE3BQ7Z3V4 AC010531.2-201ENST00000465012 153 ntBASIC2.59□□□□□ -1.99
UBE3BQ7Z3V4 AC025647.1-201ENST00000517879 253 ntBASIC2.59□□□□□ -1.99
UBE3BQ7Z3V4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.59□□□□□ -1.99
UBE3BQ7Z3V4 MIR5002-201ENST00000584713 97 ntBASIC2.59□□□□□ -1.99
UBE3BQ7Z3V4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
UBE3BQ7Z3V4 RNA5SP393-201ENST00000363423 117 ntBASIC2.58□□□□□ -2
UBE3BQ7Z3V4 RNA5SP125-201ENST00000364843 120 ntBASIC2.58□□□□□ -2
UBE3BQ7Z3V4 RNU6-418P-201ENST00000384035 107 ntBASIC2.58□□□□□ -2
UBE3BQ7Z3V4 RNU6-209P-201ENST00000384118 107 ntBASIC2.58□□□□□ -2
UBE3BQ7Z3V4 SNORA20B-201ENST00000384220 132 ntBASIC2.58□□□□□ -2
UBE3BQ7Z3V4 Y_RNA.456-201ENST00000384232 111 ntBASIC2.58□□□□□ -2
UBE3BQ7Z3V4 MIR764-201ENST00000390811 85 ntBASIC2.58□□□□□ -2
UBE3BQ7Z3V4 Y_RNA.793-201ENST00000411222 111 ntBASIC2.58□□□□□ -2
UBE3BQ7Z3V4 RNU6-57P-201ENST00000411348 103 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 253.1 ms