Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ELOCP20-201ENST00000422460 345 ntBASIC1.59□□□□□ -2.15
NHLRC1Q6VVB1 AC099799.1-201ENST00000439809 192 ntBASIC1.59□□□□□ -2.15
NHLRC1Q6VVB1 MRPS35P2-201ENST00000508242 191 ntBASIC1.59□□□□□ -2.15
NHLRC1Q6VVB1 RNU6-635P-201ENST00000516651 102 ntBASIC1.59□□□□□ -2.15
NHLRC1Q6VVB1 RNU1-142P-201ENST00000516682 145 ntBASIC1.59□□□□□ -2.15
NHLRC1Q6VVB1 AC131281.1-201ENST00000522984 164 ntBASIC1.59□□□□□ -2.15
NHLRC1Q6VVB1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.59□□□□□ -2.15
NHLRC1Q6VVB1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.59□□□□□ -2.15
NHLRC1Q6VVB1 AC024614.2-201ENST00000577584 372 ntBASIC1.59□□□□□ -2.15
NHLRC1Q6VVB1 MIR4255-201ENST00000579351 72 ntBASIC1.59□□□□□ -2.15
NHLRC1Q6VVB1 MIR4285-201ENST00000581001 85 ntBASIC1.59□□□□□ -2.15
NHLRC1Q6VVB1 MIR3149-201ENST00000584629 83 ntBASIC1.59□□□□□ -2.15
NHLRC1Q6VVB1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
NHLRC1Q6VVB1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 RNU6-222P-201ENST00000362438 107 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 Y_RNA.210-201ENST00000364161 110 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 SNORA63D-201ENST00000364359 132 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 RNA5SP363-201ENST00000365072 115 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 AC117470.1-201ENST00000381974 330 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 Y_RNA.389-201ENST00000383924 113 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 MIR583-201ENST00000384846 75 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 MT-TW-201ENST00000387382 68 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 RNU6-1109P-201ENST00000391187 107 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 AL117342.1-201ENST00000404861 406 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 AC004866.1-201ENST00000411748 78 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 AC092423.1-201ENST00000430165 186 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 USP9YP16-201ENST00000430287 407 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 HSPE1P21-201ENST00000438283 308 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 AL731563.1-201ENST00000442202 214 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 USP9YP23-201ENST00000455085 407 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 AC010469.2-201ENST00000496412 480 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 RPL23AP63-201ENST00000498752 471 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 MTND1P19-201ENST00000511780 315 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 RNU6-1114P-201ENST00000516022 107 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 RNU6-475P-201ENST00000516073 104 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 Y_RNA.680-201ENST00000516441 93 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 Y_RNA.715-201ENST00000517082 110 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 AC040926.1-201ENST00000530195 238 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 CBX3P4-201ENST00000538909 354 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 AL137100.2-201ENST00000555786 315 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 AC006600.1-201ENST00000572529 153 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 AC010999.1-201ENST00000611856 324 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 AL359075.3-201ENST00000613288 217 ntBASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
NHLRC1Q6VVB1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 WWP1P1-201ENST00000466609 2769 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 RNU6-238P-201ENST00000363313 106 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 Y_RNA.140-201ENST00000363474 103 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 Y_RNA.238-201ENST00000364441 102 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 Y_RNA.405-201ENST00000383979 100 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 Y_RNA.451-201ENST00000384200 100 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 Y_RNA.524-201ENST00000384564 100 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 Y_RNA.561-201ENST00000384694 100 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 RNU6-907P-201ENST00000390924 102 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 RNA5SP213-201ENST00000391031 106 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 SNORA40.18-201ENST00000391200 128 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 Y_RNA.592-201ENST00000410274 109 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 RNA5SP247-201ENST00000411181 105 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 MTCYBP10-201ENST00000424905 650 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 AC245047.4-201ENST00000433189 144 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 DYNLT3P2-201ENST00000442517 295 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 snoU13.27-201ENST00000459278 104 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 RPL26P26-201ENST00000480251 434 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 Y_RNA.668-201ENST00000516233 93 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 SNORA40.14-201ENST00000516543 86 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 RNU6-264P-201ENST00000517134 104 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 AC025647.1-201ENST00000517879 253 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 AL161670.1-201ENST00000554348 137 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 AC090617.3-201ENST00000573670 475 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 MIR3684-201ENST00000579779 74 ntBASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
NHLRC1Q6VVB1 MIR126-201ENST00000362291 85 ntBASIC1.56□□□□□ -2.16
NHLRC1Q6VVB1 Y_RNA.39-201ENST00000362620 98 ntBASIC1.56□□□□□ -2.16
NHLRC1Q6VVB1 Y_RNA.64-201ENST00000362845 102 ntBASIC1.56□□□□□ -2.16
NHLRC1Q6VVB1 SNORA63.7-201ENST00000365579 123 ntBASIC1.56□□□□□ -2.16
NHLRC1Q6VVB1 Y_RNA.483-201ENST00000384380 101 ntBASIC1.56□□□□□ -2.16
NHLRC1Q6VVB1 RNU6-417P-201ENST00000384712 107 ntBASIC1.56□□□□□ -2.16
NHLRC1Q6VVB1 MIR1252-201ENST00000408861 65 ntBASIC1.56□□□□□ -2.16
NHLRC1Q6VVB1 AL445685.2-201ENST00000422551 342 ntBASIC1.56□□□□□ -2.16
NHLRC1Q6VVB1 HSPE1P24-201ENST00000450782 238 ntBASIC1.56□□□□□ -2.16
NHLRC1Q6VVB1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.56□□□□□ -2.16
NHLRC1Q6VVB1 AC098869.1-201ENST00000481627 292 ntBASIC1.56□□□□□ -2.16
NHLRC1Q6VVB1 AC108729.3-201ENST00000513484 108 ntBASIC1.56□□□□□ -2.16
NHLRC1Q6VVB1 RNU6-397P-201ENST00000516226 104 ntBASIC1.56□□□□□ -2.16
NHLRC1Q6VVB1 Y_RNA.683-201ENST00000516508 93 ntBASIC1.56□□□□□ -2.16
NHLRC1Q6VVB1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.56□□□□□ -2.16
NHLRC1Q6VVB1 AC022616.4-201ENST00000522985 181 ntBASIC1.56□□□□□ -2.16
NHLRC1Q6VVB1 AC124312.5-201ENST00000604451 268 ntBASIC1.56□□□□□ -2.16
NHLRC1Q6VVB1 MIR6845-201ENST00000613182 61 ntBASIC1.56□□□□□ -2.16
NHLRC1Q6VVB1 U2.1-201ENST00000618978 145 ntBASIC1.56□□□□□ -2.16
NHLRC1Q6VVB1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
NHLRC1Q6VVB1 AC100821.1-201ENST00000523153 2479 ntBASIC1.55□□□□□ -2.16
NHLRC1Q6VVB1 Y_RNA.149-201ENST00000363558 117 ntBASIC1.55□□□□□ -2.16
NHLRC1Q6VVB1 Y_RNA.358-201ENST00000365491 99 ntBASIC1.55□□□□□ -2.16
NHLRC1Q6VVB1 SNORD14.1-201ENST00000365609 90 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms