Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AC009238.1-201ENST00000442165 424 ntBASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 AC009237.6-201ENST00000446969 424 ntBASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 RPL23AP67-201ENST00000465341 474 ntBASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 RNA5SP395-201ENST00000516567 118 ntBASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 RNU7-128P-201ENST00000517247 62 ntBASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 FAM71BP1-201ENST00000604431 523 ntBASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
PTCRAQ6ISU1 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCRAQ6ISU1 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PTCRAQ6ISU1 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.77□□□□□ -1.81
PTCRAQ6ISU1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
PTCRAQ6ISU1 Y_RNA.267-201ENST00000364679 109 ntBASIC3.77□□□□□ -1.81
PTCRAQ6ISU1 Y_RNA.454-201ENST00000384224 113 ntBASIC3.77□□□□□ -1.81
PTCRAQ6ISU1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.77□□□□□ -1.81
PTCRAQ6ISU1 MICF-203ENST00000432679 129 ntBASIC3.77□□□□□ -1.81
PTCRAQ6ISU1 AL049830.1-201ENST00000468034 425 ntBASIC3.77□□□□□ -1.81
PTCRAQ6ISU1 CYP4A43P-201ENST00000568156 121 ntBASIC3.77□□□□□ -1.81
PTCRAQ6ISU1 AC104984.5-201ENST00000586878 94 ntBASIC3.77□□□□□ -1.81
PTCRAQ6ISU1 IGLL4P-201ENST00000614590 133 ntBASIC3.77□□□□□ -1.81
PTCRAQ6ISU1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCRAQ6ISU1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCRAQ6ISU1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTCRAQ6ISU1 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCRAQ6ISU1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
PTCRAQ6ISU1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.77□□□□□ -1.81
PTCRAQ6ISU1 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCRAQ6ISU1 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.76□□□□□ -1.81
PTCRAQ6ISU1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PTCRAQ6ISU1 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTCRAQ6ISU1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTCRAQ6ISU1 RNU6-228P-201ENST00000362700 106 ntBASIC3.76□□□□□ -1.81
PTCRAQ6ISU1 RNU6-1099P-201ENST00000363533 107 ntBASIC3.76□□□□□ -1.81
PTCRAQ6ISU1 SNORD14E-201ENST00000364009 85 ntBASIC3.76□□□□□ -1.81
PTCRAQ6ISU1 Y_RNA.440-201ENST00000384120 114 ntBASIC3.76□□□□□ -1.81
PTCRAQ6ISU1 RNU6-813P-201ENST00000384691 107 ntBASIC3.76□□□□□ -1.81
PTCRAQ6ISU1 SNORD17-201ENST00000390930 237 ntBASIC3.76□□□□□ -1.81
PTCRAQ6ISU1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.76□□□□□ -1.81
PTCRAQ6ISU1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.76□□□□□ -1.81
PTCRAQ6ISU1 RNA5SP341-201ENST00000516261 117 ntBASIC3.76□□□□□ -1.81
PTCRAQ6ISU1 AP002004.2-201ENST00000531656 154 ntBASIC3.76□□□□□ -1.81
PTCRAQ6ISU1 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.76□□□□□ -1.81
PTCRAQ6ISU1 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.76□□□□□ -1.81
PTCRAQ6ISU1 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.76□□□□□ -1.81
PTCRAQ6ISU1 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PTCRAQ6ISU1 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PTCRAQ6ISU1 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.75□□□□□ -1.81
PTCRAQ6ISU1 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PTCRAQ6ISU1 RNY1P1-201ENST00000364372 112 ntBASIC3.75□□□□□ -1.81
PTCRAQ6ISU1 RNA5SP126-201ENST00000365092 109 ntBASIC3.75□□□□□ -1.81
PTCRAQ6ISU1 Y_RNA.507-201ENST00000384500 99 ntBASIC3.75□□□□□ -1.81
PTCRAQ6ISU1 MIR93-201ENST00000385024 80 ntBASIC3.75□□□□□ -1.81
PTCRAQ6ISU1 AC096949.1-201ENST00000412047 152 ntBASIC3.75□□□□□ -1.81
PTCRAQ6ISU1 AC244505.4-201ENST00000434905 287 ntBASIC3.75□□□□□ -1.81
PTCRAQ6ISU1 SSXP5-201ENST00000443473 287 ntBASIC3.75□□□□□ -1.81
PTCRAQ6ISU1 RNU7-94P-201ENST00000459576 63 ntBASIC3.75□□□□□ -1.81
PTCRAQ6ISU1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.75□□□□□ -1.81
PTCRAQ6ISU1 RNA5SP208-201ENST00000516156 78 ntBASIC3.75□□□□□ -1.81
PTCRAQ6ISU1 RNU1-142P-201ENST00000516682 145 ntBASIC3.75□□□□□ -1.81
PTCRAQ6ISU1 RNU7-6P-201ENST00000516845 62 ntBASIC3.75□□□□□ -1.81
PTCRAQ6ISU1 MIR5739-201ENST00000619803 80 ntBASIC3.75□□□□□ -1.81
PTCRAQ6ISU1 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTCRAQ6ISU1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTCRAQ6ISU1 MAPK10-253ENST00000641010 4072 ntBASIC3.75□□□□□ -1.81
PTCRAQ6ISU1 AL035425.3-201ENST00000564206 4996 ntBASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 RNA5SP432-201ENST00000362480 116 ntBASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 RNU6-242P-201ENST00000384359 107 ntBASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 Y_RNA.547-201ENST00000384654 119 ntBASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 AL445646.1-201ENST00000431784 216 ntBASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 RPS12P18-201ENST00000442381 270 ntBASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 AC087499.4-201ENST00000448505 178 ntBASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 SCARNA17.1-201ENST00000516211 143 ntBASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 SCARNA17.2-201ENST00000516334 143 ntBASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 RNU7-25P-201ENST00000516544 62 ntBASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 AC008011.1-201ENST00000545989 227 ntBASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 MIR5004-201ENST00000579078 107 ntBASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 SCARNA17.4-201ENST00000614296 143 ntBASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 MIR6715A-201ENST00000615929 79 ntBASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTCRAQ6ISU1 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTCRAQ6ISU1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
PTCRAQ6ISU1 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.73□□□□□ -1.81
PTCRAQ6ISU1 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.73□□□□□ -1.81
PTCRAQ6ISU1 Y_RNA.290-201ENST00000364879 114 ntBASIC3.73□□□□□ -1.81
PTCRAQ6ISU1 SNORA4.2-201ENST00000365313 147 ntBASIC3.73□□□□□ -1.81
PTCRAQ6ISU1 Y_RNA.351-201ENST00000365436 96 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms