Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AP002001.1-203ENST00000534002 267 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 AC011604.1-201ENST00000545978 196 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.08□□□□□ -2.24
ATL3Q6DD88 AC091178.2-201ENST00000584401 117 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 HSPE1P19-201ENST00000603327 295 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 AC080078.2-201ENST00000603766 501 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 7SK.8-201ENST00000612110 250 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 MIR6504-201ENST00000613520 61 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 7SK.11-201ENST00000615477 250 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 7SK.13-201ENST00000622040 250 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 RNA5SP361-201ENST00000362686 118 ntBASIC1.07□□□□□ -2.24
ATL3Q6DD88 RNU6-454P-201ENST00000364292 107 ntBASIC1.07□□□□□ -2.24
ATL3Q6DD88 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
ATL3Q6DD88 RNU6-1264P-201ENST00000383891 107 ntBASIC1.07□□□□□ -2.24
ATL3Q6DD88 RNU6-700P-201ENST00000391043 107 ntBASIC1.07□□□□□ -2.24
ATL3Q6DD88 RNU6-192P-201ENST00000391253 100 ntBASIC1.07□□□□□ -2.24
ATL3Q6DD88 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.07□□□□□ -2.24
ATL3Q6DD88 RPS27P22-201ENST00000478056 241 ntBASIC1.07□□□□□ -2.24
ATL3Q6DD88 RPL7P42-201ENST00000481005 679 ntBASIC1.07□□□□□ -2.24
ATL3Q6DD88 AC097462.1-201ENST00000514125 324 ntBASIC1.07□□□□□ -2.24
ATL3Q6DD88 RN7SKP49-201ENST00000516675 260 ntBASIC1.07□□□□□ -2.24
ATL3Q6DD88 RNU7-30P-201ENST00000516835 62 ntBASIC1.07□□□□□ -2.24
ATL3Q6DD88 AC027419.1-201ENST00000522976 328 ntBASIC1.07□□□□□ -2.24
ATL3Q6DD88 MIR4452-201ENST00000583004 71 ntBASIC1.07□□□□□ -2.24
ATL3Q6DD88 AC011712.1-201ENST00000588959 234 ntBASIC1.07□□□□□ -2.24
ATL3Q6DD88 AL162424.1-201ENST00000602325 221 ntBASIC1.07□□□□□ -2.24
ATL3Q6DD88 AC005828.6-201ENST00000606610 232 ntBASIC1.07□□□□□ -2.24
ATL3Q6DD88 AL021879.1-201ENST00000611756 288 ntBASIC1.07□□□□□ -2.24
ATL3Q6DD88 AL513423.1-201ENST00000621695 132 ntBASIC1.07□□□□□ -2.24
ATL3Q6DD88 AC139792.2-201ENST00000624218 587 ntBASIC1.07□□□□□ -2.24
ATL3Q6DD88 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.07□□□□□ -2.24
ATL3Q6DD88 SNORA27.1-201ENST00000362604 124 ntBASIC1.06□□□□□ -2.24
ATL3Q6DD88 RNU6-601P-201ENST00000384540 107 ntBASIC1.06□□□□□ -2.24
ATL3Q6DD88 MTCYBP4-201ENST00000401524 249 ntBASIC1.06□□□□□ -2.24
ATL3Q6DD88 AL034345.1-201ENST00000407768 123 ntBASIC1.06□□□□□ -2.24
ATL3Q6DD88 AC107399.1-201ENST00000451226 265 ntBASIC1.06□□□□□ -2.24
ATL3Q6DD88 RPS23P4-201ENST00000487908 423 ntBASIC1.06□□□□□ -2.24
ATL3Q6DD88 HMGN1P7-201ENST00000491722 313 ntBASIC1.06□□□□□ -2.24
ATL3Q6DD88 SNORD116-28-201ENST00000516123 91 ntBASIC1.06□□□□□ -2.24
ATL3Q6DD88 AC018448.1-201ENST00000552843 316 ntBASIC1.06□□□□□ -2.24
ATL3Q6DD88 MIR3684-201ENST00000579779 74 ntBASIC1.06□□□□□ -2.24
ATL3Q6DD88 AC104260.1-201ENST00000616660 539 ntBASIC1.06□□□□□ -2.24
ATL3Q6DD88 AC073349.3-201ENST00000617616 186 ntBASIC1.06□□□□□ -2.24
ATL3Q6DD88 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.06□□□□□ -2.24
ATL3Q6DD88 MIR6079-201ENST00000635807 62 ntBASIC1.06□□□□□ -2.24
ATL3Q6DD88 RNU6-1187P-201ENST00000364771 110 ntBASIC1.05□□□□□ -2.24
ATL3Q6DD88 MIR653-201ENST00000385279 96 ntBASIC1.05□□□□□ -2.24
ATL3Q6DD88 RNU4-14P-201ENST00000410858 122 ntBASIC1.05□□□□□ -2.24
ATL3Q6DD88 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.05□□□□□ -2.24
ATL3Q6DD88 AL133373.1-201ENST00000497098 94 ntBASIC1.05□□□□□ -2.24
ATL3Q6DD88 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.05□□□□□ -2.24
ATL3Q6DD88 RNA5SP404-201ENST00000517118 132 ntBASIC1.05□□□□□ -2.24
ATL3Q6DD88 RNU7-172P-201ENST00000517125 64 ntBASIC1.05□□□□□ -2.24
ATL3Q6DD88 U6.115-201ENST00000636045 103 ntBASIC1.05□□□□□ -2.24
ATL3Q6DD88 RNU6-845P-201ENST00000362578 103 ntBASIC1.04□□□□□ -2.24
ATL3Q6DD88 RNU1-124P-201ENST00000363861 145 ntBASIC1.04□□□□□ -2.24
ATL3Q6DD88 Y_RNA.279-201ENST00000364763 95 ntBASIC1.04□□□□□ -2.24
ATL3Q6DD88 RNU6-117P-201ENST00000365415 107 ntBASIC1.04□□□□□ -2.24
ATL3Q6DD88 Y_RNA.358-201ENST00000365491 99 ntBASIC1.04□□□□□ -2.24
ATL3Q6DD88 RNU6-767P-201ENST00000384132 107 ntBASIC1.04□□□□□ -2.24
ATL3Q6DD88 RNU6-505P-201ENST00000384427 107 ntBASIC1.04□□□□□ -2.24
ATL3Q6DD88 MIR660-201ENST00000385235 97 ntBASIC1.04□□□□□ -2.24
ATL3Q6DD88 SNORA75.4-201ENST00000391278 119 ntBASIC1.04□□□□□ -2.24
ATL3Q6DD88 AL353997.1-201ENST00000432936 108 ntBASIC1.04□□□□□ -2.24
ATL3Q6DD88 UBE2V1P7-201ENST00000446395 340 ntBASIC1.04□□□□□ -2.24
ATL3Q6DD88 UQCRBP2-201ENST00000447827 297 ntBASIC1.04□□□□□ -2.24
ATL3Q6DD88 RNU7-87P-201ENST00000459343 62 ntBASIC1.04□□□□□ -2.24
ATL3Q6DD88 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.04□□□□□ -2.24
ATL3Q6DD88 Y_RNA.691-201ENST00000516611 103 ntBASIC1.04□□□□□ -2.24
ATL3Q6DD88 AL513534.2-201ENST00000603836 250 ntBASIC1.04□□□□□ -2.24
ATL3Q6DD88 AC012676.2-201ENST00000619258 186 ntBASIC1.04□□□□□ -2.24
ATL3Q6DD88 AC073544.1-201ENST00000600110 1595 ntBASIC1.04□□□□□ -2.24
ATL3Q6DD88 Y_RNA.243-201ENST00000364481 109 ntBASIC1.03□□□□□ -2.24
ATL3Q6DD88 Y_RNA.498-201ENST00000384460 102 ntBASIC1.03□□□□□ -2.24
ATL3Q6DD88 MIR489-201ENST00000384923 84 ntBASIC1.03□□□□□ -2.24
ATL3Q6DD88 MIR532-201ENST00000385025 91 ntBASIC1.03□□□□□ -2.24
ATL3Q6DD88 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
ATL3Q6DD88 RNU5A-5P-201ENST00000411054 116 ntBASIC1.03□□□□□ -2.24
ATL3Q6DD88 DYNLT3P2-201ENST00000442517 295 ntBASIC1.03□□□□□ -2.24
ATL3Q6DD88 AC092991.1-201ENST00000477176 376 ntBASIC1.03□□□□□ -2.24
ATL3Q6DD88 RPL17P19-201ENST00000489069 552 ntBASIC1.03□□□□□ -2.24
ATL3Q6DD88 OR9P1P-201ENST00000496431 281 ntBASIC1.03□□□□□ -2.24
ATL3Q6DD88 RNA5SP20-201ENST00000515976 84 ntBASIC1.03□□□□□ -2.24
ATL3Q6DD88 SCARNA16.2-201ENST00000516520 172 ntBASIC1.03□□□□□ -2.24
ATL3Q6DD88 RNA5SP168-201ENST00000516642 112 ntBASIC1.03□□□□□ -2.24
ATL3Q6DD88 RNU6-341P-201ENST00000516973 96 ntBASIC1.03□□□□□ -2.24
ATL3Q6DD88 AC005899.2-201ENST00000584353 90 ntBASIC1.03□□□□□ -2.24
ATL3Q6DD88 AC092794.2-201ENST00000620933 563 ntBASIC1.03□□□□□ -2.24
ATL3Q6DD88 SNORD3E-202ENST00000627253 216 ntBASIC1.03□□□□□ -2.24
ATL3Q6DD88 RNU6-1301P-201ENST00000362724 104 ntBASIC1.02□□□□□ -2.25
ATL3Q6DD88 Y_RNA.166-201ENST00000363730 102 ntBASIC1.02□□□□□ -2.25
ATL3Q6DD88 RNU6-879P-201ENST00000364328 108 ntBASIC1.02□□□□□ -2.25
ATL3Q6DD88 RNU6-424P-201ENST00000384367 105 ntBASIC1.02□□□□□ -2.25
ATL3Q6DD88 SNORA25-201ENST00000384384 134 ntBASIC1.02□□□□□ -2.25
ATL3Q6DD88 RNY1P14-201ENST00000384426 108 ntBASIC1.02□□□□□ -2.25
ATL3Q6DD88 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
ATL3Q6DD88 RNU11-5P-201ENST00000391216 129 ntBASIC1.02□□□□□ -2.25
ATL3Q6DD88 PDCL2P1-201ENST00000419302 352 ntBASIC1.02□□□□□ -2.25
ATL3Q6DD88 AC018865.2-201ENST00000423631 129 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms