Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 Y_RNA.183-201ENST00000363882 113 ntBASIC1.74□□□□□ -2.13
LRIF1Q5T3J3 Y_RNA.422-201ENST00000384054 114 ntBASIC1.74□□□□□ -2.13
LRIF1Q5T3J3 Y_RNA.455-201ENST00000384230 98 ntBASIC1.74□□□□□ -2.13
LRIF1Q5T3J3 MIR562-201ENST00000384894 95 ntBASIC1.74□□□□□ -2.13
LRIF1Q5T3J3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
LRIF1Q5T3J3 RNU6-130P-201ENST00000411112 103 ntBASIC1.74□□□□□ -2.13
LRIF1Q5T3J3 Z98742.3-201ENST00000418637 326 ntBASIC1.74□□□□□ -2.13
LRIF1Q5T3J3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.74□□□□□ -2.13
LRIF1Q5T3J3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.74□□□□□ -2.13
LRIF1Q5T3J3 RNU6-1278P-201ENST00000516130 107 ntBASIC1.74□□□□□ -2.13
LRIF1Q5T3J3 RNU6-1153P-201ENST00000516760 105 ntBASIC1.74□□□□□ -2.13
LRIF1Q5T3J3 SNORA44.1-201ENST00000517031 108 ntBASIC1.74□□□□□ -2.13
LRIF1Q5T3J3 MIR4680-201ENST00000580906 66 ntBASIC1.74□□□□□ -2.13
LRIF1Q5T3J3 AC012493.3-201ENST00000604494 112 ntBASIC1.74□□□□□ -2.13
LRIF1Q5T3J3 AC103810.8-201ENST00000607347 118 ntBASIC1.74□□□□□ -2.13
LRIF1Q5T3J3 PART1_1.1-201ENST00000611761 217 ntBASIC1.74□□□□□ -2.13
LRIF1Q5T3J3 AC127459.3-201ENST00000624328 466 ntBASIC1.74□□□□□ -2.13
LRIF1Q5T3J3 AC018630.2-201ENST00000534866 2403 ntBASIC1.74□□□□□ -2.13
LRIF1Q5T3J3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LRIF1Q5T3J3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
LRIF1Q5T3J3 SNORD48-201ENST00000364953 64 ntBASIC1.73□□□□□ -2.13
LRIF1Q5T3J3 RNU6-639P-201ENST00000384074 107 ntBASIC1.73□□□□□ -2.13
LRIF1Q5T3J3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LRIF1Q5T3J3 AC073910.1-201ENST00000445047 438 ntBASIC1.73□□□□□ -2.13
LRIF1Q5T3J3 RNU6-436P-201ENST00000516171 114 ntBASIC1.73□□□□□ -2.13
LRIF1Q5T3J3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LRIF1Q5T3J3 AL355297.3-201ENST00000604082 446 ntBASIC1.73□□□□□ -2.13
LRIF1Q5T3J3 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.73□□□□□ -2.13
LRIF1Q5T3J3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
LRIF1Q5T3J3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LRIF1Q5T3J3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LRIF1Q5T3J3 Y_RNA.143-201ENST00000363520 106 ntBASIC1.72□□□□□ -2.13
LRIF1Q5T3J3 Y_RNA.276-201ENST00000364732 109 ntBASIC1.72□□□□□ -2.13
LRIF1Q5T3J3 RNU6-117P-201ENST00000365415 107 ntBASIC1.72□□□□□ -2.13
LRIF1Q5T3J3 SNORA3.2-201ENST00000408221 125 ntBASIC1.72□□□□□ -2.13
LRIF1Q5T3J3 RNU2-61P-201ENST00000411069 191 ntBASIC1.72□□□□□ -2.13
LRIF1Q5T3J3 RPS27P1-201ENST00000450552 247 ntBASIC1.72□□□□□ -2.13
LRIF1Q5T3J3 TRBV12-1-201ENST00000479785 344 ntBASIC1.72□□□□□ -2.13
LRIF1Q5T3J3 RPS29P21-201ENST00000496272 170 ntBASIC1.72□□□□□ -2.13
LRIF1Q5T3J3 AC025465.3-201ENST00000510570 311 ntBASIC1.72□□□□□ -2.13
LRIF1Q5T3J3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.72□□□□□ -2.13
LRIF1Q5T3J3 MIR4419B-201ENST00000577260 68 ntBASIC1.72□□□□□ -2.13
LRIF1Q5T3J3 AC024614.2-201ENST00000577584 372 ntBASIC1.72□□□□□ -2.13
LRIF1Q5T3J3 AC022217.4-201ENST00000604389 163 ntBASIC1.72□□□□□ -2.13
LRIF1Q5T3J3 Y_RNA.124-201ENST00000363339 93 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 Y_RNA.152-201ENST00000363578 100 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 RNU6-324P-201ENST00000363957 106 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 RNU6-450P-201ENST00000364654 107 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 Y_RNA.331-201ENST00000365267 102 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 RNU6-937P-201ENST00000384325 106 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 RNU6-505P-201ENST00000384427 107 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 RNU6-1011P-201ENST00000384668 107 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 RPL21P1-201ENST00000399532 476 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 AC019129.1-201ENST00000403786 261 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 RNU6-710P-201ENST00000410424 105 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 RPL31P63-201ENST00000422565 375 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 snoU13.27-201ENST00000459278 104 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 SEPT14P8-201ENST00000508026 178 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 RNU7-110P-201ENST00000516891 62 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 RNU6-897P-201ENST00000517135 105 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 MIR3122-201ENST00000577243 73 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 AC113195.1-201ENST00000579952 141 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 AC073413.2-201ENST00000604332 360 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 RAC1P9-201ENST00000604990 392 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 SNORD113-5-201ENST00000607261 78 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 MIR6852-201ENST00000621699 66 ntBASIC1.71□□□□□ -2.14
LRIF1Q5T3J3 AL356292.1-201ENST00000283110 373 ntBASIC1.7□□□□□ -2.14
LRIF1Q5T3J3 MIR449A-201ENST00000362113 91 ntBASIC1.7□□□□□ -2.14
LRIF1Q5T3J3 Y_RNA.111-201ENST00000363248 100 ntBASIC1.7□□□□□ -2.14
LRIF1Q5T3J3 RNU6-414P-201ENST00000363705 104 ntBASIC1.7□□□□□ -2.14
LRIF1Q5T3J3 RNU6-21P-201ENST00000384710 107 ntBASIC1.7□□□□□ -2.14
LRIF1Q5T3J3 RNU6-376P-201ENST00000384731 106 ntBASIC1.7□□□□□ -2.14
LRIF1Q5T3J3 RNA5SP109-201ENST00000391010 116 ntBASIC1.7□□□□□ -2.14
LRIF1Q5T3J3 RNU6-985P-201ENST00000410182 104 ntBASIC1.7□□□□□ -2.14
LRIF1Q5T3J3 COX6CP10-201ENST00000416832 224 ntBASIC1.7□□□□□ -2.14
LRIF1Q5T3J3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.7□□□□□ -2.14
LRIF1Q5T3J3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.7□□□□□ -2.14
LRIF1Q5T3J3 MIR3198-2-201ENST00000577868 80 ntBASIC1.7□□□□□ -2.14
LRIF1Q5T3J3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.7□□□□□ -2.14
LRIF1Q5T3J3 MIR8074-201ENST00000615081 81 ntBASIC1.7□□□□□ -2.14
LRIF1Q5T3J3 AC022140.2-201ENST00000623500 188 ntBASIC1.7□□□□□ -2.14
LRIF1Q5T3J3 MIR6079-201ENST00000635807 62 ntBASIC1.7□□□□□ -2.14
LRIF1Q5T3J3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 SNORA63-201ENST00000363450 132 ntBASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 RNU6-694P-201ENST00000364071 147 ntBASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 Y_RNA.500-201ENST00000384466 111 ntBASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 Y_RNA.527-201ENST00000384573 102 ntBASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 MIR520G-201ENST00000385064 90 ntBASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 MIR30A-201ENST00000385092 71 ntBASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 SNORD115-46-201ENST00000390982 71 ntBASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 RN7SKP200-201ENST00000410564 320 ntBASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 OOSP1P1-201ENST00000423265 274 ntBASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 AC024067.1-201ENST00000426199 223 ntBASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 AC245047.3-201ENST00000429428 127 ntBASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 RNU6-1143P-201ENST00000516125 104 ntBASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 RNU6-764P-201ENST00000516396 105 ntBASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 RNU6-966P-201ENST00000516479 104 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms