Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 SNORA70.12-201ENST00000516084 153 ntBASIC2.04□□□□□ -2.08
CCDC38Q502W7 RNU6-155P-201ENST00000516347 100 ntBASIC2.04□□□□□ -2.08
CCDC38Q502W7 AC104695.3-201ENST00000604052 296 ntBASIC2.04□□□□□ -2.08
CCDC38Q502W7 AL356292.1-201ENST00000283110 373 ntBASIC2.03□□□□□ -2.08
CCDC38Q502W7 Y_RNA.202-201ENST00000364083 110 ntBASIC2.03□□□□□ -2.08
CCDC38Q502W7 RNU6-1227P-201ENST00000383981 107 ntBASIC2.03□□□□□ -2.08
CCDC38Q502W7 SNORD63-201ENST00000384262 68 ntBASIC2.03□□□□□ -2.08
CCDC38Q502W7 MIR504-201ENST00000385065 83 ntBASIC2.03□□□□□ -2.08
CCDC38Q502W7 RNU6-823P-201ENST00000391042 103 ntBASIC2.03□□□□□ -2.08
CCDC38Q502W7 RNU6-101P-201ENST00000410323 104 ntBASIC2.03□□□□□ -2.08
CCDC38Q502W7 RNU6-1199P-201ENST00000411249 104 ntBASIC2.03□□□□□ -2.08
CCDC38Q502W7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.03□□□□□ -2.08
CCDC38Q502W7 AC005534.2-201ENST00000431047 433 ntBASIC2.03□□□□□ -2.08
CCDC38Q502W7 SNORA44.1-201ENST00000517031 108 ntBASIC2.03□□□□□ -2.08
CCDC38Q502W7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC38Q502W7 RPL21P9-201ENST00000556149 474 ntBASIC2.03□□□□□ -2.08
CCDC38Q502W7 MIR5089-201ENST00000580047 84 ntBASIC2.03□□□□□ -2.08
CCDC38Q502W7 AL356055.1-201ENST00000602528 446 ntBASIC2.03□□□□□ -2.08
CCDC38Q502W7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
CCDC38Q502W7 Y_RNA.124-201ENST00000363339 93 ntBASIC2.02□□□□□ -2.09
CCDC38Q502W7 Y_RNA.158-201ENST00000363651 101 ntBASIC2.02□□□□□ -2.09
CCDC38Q502W7 Y_RNA.389-201ENST00000383924 113 ntBASIC2.02□□□□□ -2.09
CCDC38Q502W7 RNU6-950P-201ENST00000384651 107 ntBASIC2.02□□□□□ -2.09
CCDC38Q502W7 RNA5SP109-201ENST00000391010 116 ntBASIC2.02□□□□□ -2.09
CCDC38Q502W7 AL031003.1-201ENST00000404229 172 ntBASIC2.02□□□□□ -2.09
CCDC38Q502W7 RNA5SP489-201ENST00000410986 109 ntBASIC2.02□□□□□ -2.09
CCDC38Q502W7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.02□□□□□ -2.09
CCDC38Q502W7 RPS27P1-201ENST00000450552 247 ntBASIC2.02□□□□□ -2.09
CCDC38Q502W7 AC005042.3-201ENST00000453230 174 ntBASIC2.02□□□□□ -2.09
CCDC38Q502W7 AC025465.3-201ENST00000510570 311 ntBASIC2.02□□□□□ -2.09
CCDC38Q502W7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC38Q502W7 RNU6-1278P-201ENST00000516130 107 ntBASIC2.02□□□□□ -2.09
CCDC38Q502W7 Y_RNA.715-201ENST00000517082 110 ntBASIC2.02□□□□□ -2.09
CCDC38Q502W7 AC073413.2-201ENST00000604332 360 ntBASIC2.02□□□□□ -2.09
CCDC38Q502W7 AL021879.1-201ENST00000611756 288 ntBASIC2.02□□□□□ -2.09
CCDC38Q502W7 AC040896.1-201ENST00000613819 479 ntBASIC2.02□□□□□ -2.09
CCDC38Q502W7 AC127459.3-201ENST00000624328 466 ntBASIC2.02□□□□□ -2.09
CCDC38Q502W7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.02□□□□□ -2.09
CCDC38Q502W7 AC018630.2-201ENST00000534866 2403 ntBASIC2.01□□□□□ -2.09
CCDC38Q502W7 RNU6-414P-201ENST00000363705 104 ntBASIC2.01□□□□□ -2.09
CCDC38Q502W7 Y_RNA.216-201ENST00000364205 93 ntBASIC2.01□□□□□ -2.09
CCDC38Q502W7 RNU2-2P-201ENST00000410396 191 ntBASIC2.01□□□□□ -2.09
CCDC38Q502W7 RPL23AP36-201ENST00000413895 458 ntBASIC2.01□□□□□ -2.09
CCDC38Q502W7 snoU13.27-201ENST00000459278 104 ntBASIC2.01□□□□□ -2.09
CCDC38Q502W7 snoU13.15-201ENST00000459407 104 ntBASIC2.01□□□□□ -2.09
CCDC38Q502W7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CCDC38Q502W7 AC022217.4-201ENST00000604389 163 ntBASIC2.01□□□□□ -2.09
CCDC38Q502W7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC38Q502W7 PART1_1.1-201ENST00000611761 217 ntBASIC2.01□□□□□ -2.09
CCDC38Q502W7 MIR8074-201ENST00000615081 81 ntBASIC2.01□□□□□ -2.09
CCDC38Q502W7 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.01□□□□□ -2.09
CCDC38Q502W7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC38Q502W7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2□□□□□ -2.09
CCDC38Q502W7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CCDC38Q502W7 Y_RNA.143-201ENST00000363520 106 ntBASIC2□□□□□ -2.09
CCDC38Q502W7 RNU6-324P-201ENST00000363957 106 ntBASIC2□□□□□ -2.09
CCDC38Q502W7 RNU6-439P-201ENST00000384188 106 ntBASIC2□□□□□ -2.09
CCDC38Q502W7 MIR30A-201ENST00000385092 71 ntBASIC2□□□□□ -2.09
CCDC38Q502W7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2□□□□□ -2.09
CCDC38Q502W7 RPL21P1-201ENST00000399532 476 ntBASIC2□□□□□ -2.09
CCDC38Q502W7 MIR1252-201ENST00000408861 65 ntBASIC2□□□□□ -2.09
CCDC38Q502W7 RNU6-130P-201ENST00000411112 103 ntBASIC2□□□□□ -2.09
CCDC38Q502W7 COX6CP10-201ENST00000416832 224 ntBASIC2□□□□□ -2.09
CCDC38Q502W7 AL606517.2-201ENST00000442855 241 ntBASIC2□□□□□ -2.09
CCDC38Q502W7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2□□□□□ -2.09
CCDC38Q502W7 AC016925.2-201ENST00000605108 242 ntBASIC2□□□□□ -2.09
CCDC38Q502W7 AC011373.1-201ENST00000607270 237 ntBASIC2□□□□□ -2.09
CCDC38Q502W7 MIR219B-201ENST00000637023 88 ntBASIC2□□□□□ -2.09
CCDC38Q502W7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2□□□□□ -2.09
CCDC38Q502W7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CCDC38Q502W7 RNU6-450P-201ENST00000364654 107 ntBASIC1.99□□□□□ -2.09
CCDC38Q502W7 SNORA4.2-201ENST00000365313 147 ntBASIC1.99□□□□□ -2.09
CCDC38Q502W7 RNU6-117P-201ENST00000365415 107 ntBASIC1.99□□□□□ -2.09
CCDC38Q502W7 Y_RNA.380-201ENST00000365663 111 ntBASIC1.99□□□□□ -2.09
CCDC38Q502W7 RNU6-937P-201ENST00000384325 106 ntBASIC1.99□□□□□ -2.09
CCDC38Q502W7 RNU6-505P-201ENST00000384427 107 ntBASIC1.99□□□□□ -2.09
CCDC38Q502W7 RNU2-20P-201ENST00000410425 191 ntBASIC1.99□□□□□ -2.09
CCDC38Q502W7 RPL31P63-201ENST00000422565 375 ntBASIC1.99□□□□□ -2.09
CCDC38Q502W7 AC245047.3-201ENST00000429428 127 ntBASIC1.99□□□□□ -2.09
CCDC38Q502W7 AL445646.1-201ENST00000431784 216 ntBASIC1.99□□□□□ -2.09
CCDC38Q502W7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC38Q502W7 HSPE1P13-201ENST00000451143 297 ntBASIC1.99□□□□□ -2.09
CCDC38Q502W7 RNU6-436P-201ENST00000516171 114 ntBASIC1.99□□□□□ -2.09
CCDC38Q502W7 RNU6-966P-201ENST00000516479 104 ntBASIC1.99□□□□□ -2.09
CCDC38Q502W7 RNU6-1153P-201ENST00000516760 105 ntBASIC1.99□□□□□ -2.09
CCDC38Q502W7 RNU7-110P-201ENST00000516891 62 ntBASIC1.99□□□□□ -2.09
CCDC38Q502W7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC38Q502W7 MIR6079-201ENST00000635807 62 ntBASIC1.99□□□□□ -2.09
CCDC38Q502W7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC38Q502W7 Y_RNA.331-201ENST00000365267 102 ntBASIC1.98□□□□□ -2.09
CCDC38Q502W7 RNU6-376P-201ENST00000384731 106 ntBASIC1.98□□□□□ -2.09
CCDC38Q502W7 MIR562-201ENST00000384894 95 ntBASIC1.98□□□□□ -2.09
CCDC38Q502W7 RNU2-61P-201ENST00000411069 191 ntBASIC1.98□□□□□ -2.09
CCDC38Q502W7 JTBP1-201ENST00000441314 247 ntBASIC1.98□□□□□ -2.09
CCDC38Q502W7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC38Q502W7 HMGN2P23-201ENST00000456759 269 ntBASIC1.98□□□□□ -2.09
CCDC38Q502W7 MIR4709-201ENST00000577272 72 ntBASIC1.98□□□□□ -2.09
CCDC38Q502W7 MIR3198-2-201ENST00000577868 80 ntBASIC1.98□□□□□ -2.09
CCDC38Q502W7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.98□□□□□ -2.09
CCDC38Q502W7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms