Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC105758.1-201ENST00000506038 399 ntBASIC1.36□□□□□ -2.19
SHROOM1Q2M3G4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.36□□□□□ -2.19
SHROOM1Q2M3G4 RNU6-559P-201ENST00000516151 98 ntBASIC1.36□□□□□ -2.19
SHROOM1Q2M3G4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.36□□□□□ -2.19
SHROOM1Q2M3G4 AL137100.2-201ENST00000555786 315 ntBASIC1.36□□□□□ -2.19
SHROOM1Q2M3G4 AC022217.4-201ENST00000604389 163 ntBASIC1.36□□□□□ -2.19
SHROOM1Q2M3G4 AL355073.2-201ENST00000612106 557 ntBASIC1.36□□□□□ -2.19
SHROOM1Q2M3G4 RMST_2.1-201ENST00000617263 136 ntBASIC1.36□□□□□ -2.19
SHROOM1Q2M3G4 U6.73-201ENST00000619194 103 ntBASIC1.36□□□□□ -2.19
SHROOM1Q2M3G4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.36□□□□□ -2.19
SHROOM1Q2M3G4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SHROOM1Q2M3G4 SNORD1A-201ENST00000364968 72 ntBASIC1.35□□□□□ -2.19
SHROOM1Q2M3G4 RNU6-890P-201ENST00000384121 107 ntBASIC1.35□□□□□ -2.19
SHROOM1Q2M3G4 Y_RNA.474-201ENST00000384341 102 ntBASIC1.35□□□□□ -2.19
SHROOM1Q2M3G4 Y_RNA.498-201ENST00000384460 102 ntBASIC1.35□□□□□ -2.19
SHROOM1Q2M3G4 MIR515-2-201ENST00000384883 83 ntBASIC1.35□□□□□ -2.19
SHROOM1Q2M3G4 MIR515-1-201ENST00000384884 83 ntBASIC1.35□□□□□ -2.19
SHROOM1Q2M3G4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.35□□□□□ -2.19
SHROOM1Q2M3G4 AC114482.1-201ENST00000418010 247 ntBASIC1.35□□□□□ -2.19
SHROOM1Q2M3G4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.35□□□□□ -2.19
SHROOM1Q2M3G4 RPS27P1-201ENST00000450552 247 ntBASIC1.35□□□□□ -2.19
SHROOM1Q2M3G4 PCNPP5-201ENST00000452246 481 ntBASIC1.35□□□□□ -2.19
SHROOM1Q2M3G4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.35□□□□□ -2.19
SHROOM1Q2M3G4 SNORA31.10-201ENST00000516482 106 ntBASIC1.35□□□□□ -2.19
SHROOM1Q2M3G4 RNU7-128P-201ENST00000517247 62 ntBASIC1.35□□□□□ -2.19
SHROOM1Q2M3G4 AC008269.2-201ENST00000561915 1105 ntBASIC1.35□□□□□ -2.19
SHROOM1Q2M3G4 MIR4438-201ENST00000585271 93 ntBASIC1.35□□□□□ -2.19
SHROOM1Q2M3G4 AC104260.1-201ENST00000616660 539 ntBASIC1.35□□□□□ -2.19
SHROOM1Q2M3G4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SHROOM1Q2M3G4 RNU6-407P-201ENST00000365280 104 ntBASIC1.34□□□□□ -2.19
SHROOM1Q2M3G4 RNU6-1080P-201ENST00000383982 107 ntBASIC1.34□□□□□ -2.19
SHROOM1Q2M3G4 RNU6-42P-201ENST00000384165 107 ntBASIC1.34□□□□□ -2.19
SHROOM1Q2M3G4 AL355796.1-201ENST00000406706 323 ntBASIC1.34□□□□□ -2.19
SHROOM1Q2M3G4 RNU6-1156P-201ENST00000410365 100 ntBASIC1.34□□□□□ -2.19
SHROOM1Q2M3G4 AL135790.2-201ENST00000437701 267 ntBASIC1.34□□□□□ -2.19
SHROOM1Q2M3G4 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.34□□□□□ -2.19
SHROOM1Q2M3G4 RPS26P45-201ENST00000471748 340 ntBASIC1.34□□□□□ -2.19
SHROOM1Q2M3G4 RNU6-307P-201ENST00000516743 106 ntBASIC1.34□□□□□ -2.19
SHROOM1Q2M3G4 RNU6-264P-201ENST00000517134 104 ntBASIC1.34□□□□□ -2.19
SHROOM1Q2M3G4 AP002001.1-203ENST00000534002 267 ntBASIC1.34□□□□□ -2.19
SHROOM1Q2M3G4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.34□□□□□ -2.19
SHROOM1Q2M3G4 AC018448.1-201ENST00000552843 316 ntBASIC1.34□□□□□ -2.19
SHROOM1Q2M3G4 AL442163.3-201ENST00000554110 156 ntBASIC1.34□□□□□ -2.19
SHROOM1Q2M3G4 MIR3937-201ENST00000580135 106 ntBASIC1.34□□□□□ -2.19
SHROOM1Q2M3G4 MIR5690-201ENST00000583739 73 ntBASIC1.34□□□□□ -2.19
SHROOM1Q2M3G4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
SHROOM1Q2M3G4 AC073544.1-201ENST00000600110 1595 ntBASIC1.34□□□□□ -2.2
SHROOM1Q2M3G4 MIR302D-201ENST00000362275 68 ntBASIC1.33□□□□□ -2.2
SHROOM1Q2M3G4 Y_RNA.142-201ENST00000363491 102 ntBASIC1.33□□□□□ -2.2
SHROOM1Q2M3G4 SNORA20B-201ENST00000384220 132 ntBASIC1.33□□□□□ -2.2
SHROOM1Q2M3G4 MRPL35P1-201ENST00000404272 572 ntBASIC1.33□□□□□ -2.2
SHROOM1Q2M3G4 SNORD12B-201ENST00000410433 91 ntBASIC1.33□□□□□ -2.2
SHROOM1Q2M3G4 MRPS18CP6-201ENST00000423587 223 ntBASIC1.33□□□□□ -2.2
SHROOM1Q2M3G4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.33□□□□□ -2.2
SHROOM1Q2M3G4 AC245047.3-201ENST00000429428 127 ntBASIC1.33□□□□□ -2.2
SHROOM1Q2M3G4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.33□□□□□ -2.2
SHROOM1Q2M3G4 RNU6-625P-201ENST00000459412 107 ntBASIC1.33□□□□□ -2.2
SHROOM1Q2M3G4 SUMO2P16-201ENST00000519475 264 ntBASIC1.33□□□□□ -2.2
SHROOM1Q2M3G4 AC024995.1-201ENST00000523014 93 ntBASIC1.33□□□□□ -2.2
SHROOM1Q2M3G4 AC022432.1-201ENST00000595739 310 ntBASIC1.33□□□□□ -2.2
SHROOM1Q2M3G4 AL021879.1-201ENST00000611756 288 ntBASIC1.33□□□□□ -2.2
SHROOM1Q2M3G4 AC087588.2-201ENST00000617667 426 ntBASIC1.33□□□□□ -2.2
SHROOM1Q2M3G4 RNU6-1301P-201ENST00000362724 104 ntBASIC1.32□□□□□ -2.2
SHROOM1Q2M3G4 RNA5SP259-201ENST00000365541 109 ntBASIC1.32□□□□□ -2.2
SHROOM1Q2M3G4 Y_RNA.540-201ENST00000384638 111 ntBASIC1.32□□□□□ -2.2
SHROOM1Q2M3G4 RNU6-440P-201ENST00000390882 105 ntBASIC1.32□□□□□ -2.2
SHROOM1Q2M3G4 SNORA75.6-201ENST00000391318 127 ntBASIC1.32□□□□□ -2.2
SHROOM1Q2M3G4 AL161935.2-201ENST00000414627 60 ntBASIC1.32□□□□□ -2.2
SHROOM1Q2M3G4 AC096644.2-201ENST00000429278 159 ntBASIC1.32□□□□□ -2.2
SHROOM1Q2M3G4 TOMM22P2-201ENST00000430735 237 ntBASIC1.32□□□□□ -2.2
SHROOM1Q2M3G4 UBE2V1P7-201ENST00000446395 340 ntBASIC1.32□□□□□ -2.2
SHROOM1Q2M3G4 SNORA40.9-201ENST00000515895 93 ntBASIC1.32□□□□□ -2.2
SHROOM1Q2M3G4 RNA5SP220-201ENST00000516298 104 ntBASIC1.32□□□□□ -2.2
SHROOM1Q2M3G4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.32□□□□□ -2.2
SHROOM1Q2M3G4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.32□□□□□ -2.2
SHROOM1Q2M3G4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.32□□□□□ -2.2
SHROOM1Q2M3G4 AC113139.1-201ENST00000605049 239 ntBASIC1.32□□□□□ -2.2
SHROOM1Q2M3G4 AC021506.2-201ENST00000612354 169 ntBASIC1.32□□□□□ -2.2
SHROOM1Q2M3G4 MIR8054-201ENST00000620877 86 ntBASIC1.32□□□□□ -2.2
SHROOM1Q2M3G4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SHROOM1Q2M3G4 SNORA72.1-201ENST00000363485 129 ntBASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 RNU6-454P-201ENST00000364292 107 ntBASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 Y_RNA.303-201ENST00000364998 94 ntBASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 RNU6-1264P-201ENST00000383891 107 ntBASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 RNU6-136P-201ENST00000384663 107 ntBASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 MIR194-1-201ENST00000384892 85 ntBASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 SNORA69.1-201ENST00000390904 137 ntBASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 MTCYBP4-201ENST00000401524 249 ntBASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 RNA5SP475-201ENST00000410568 110 ntBASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 RAB28P5-201ENST00000427490 651 ntBASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 MRPS10P1-201ENST00000448483 130 ntBASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 Y_RNA.653-201ENST00000459091 95 ntBASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 AC010598.1-201ENST00000510378 103 ntBASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 RNU6-408P-201ENST00000515910 100 ntBASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 RNU7-99P-201ENST00000516271 62 ntBASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 RN7SKP49-201ENST00000516675 260 ntBASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 AC011604.1-201ENST00000545978 196 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms