Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.68□□□□□ -2.14
IRX4P78413 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
IRX4P78413 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
IRX4P78413 RNU6-961P-201ENST00000363893 105 ntBASIC1.67□□□□□ -2.14
IRX4P78413 RNU6-439P-201ENST00000384188 106 ntBASIC1.67□□□□□ -2.14
IRX4P78413 Y_RNA.498-201ENST00000384460 102 ntBASIC1.67□□□□□ -2.14
IRX4P78413 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
IRX4P78413 MIR1185-2-201ENST00000408687 86 ntBASIC1.67□□□□□ -2.14
IRX4P78413 AC016909.1-201ENST00000415916 166 ntBASIC1.67□□□□□ -2.14
IRX4P78413 AC060773.1-201ENST00000421698 310 ntBASIC1.67□□□□□ -2.14
IRX4P78413 SDAD1P3-201ENST00000427380 333 ntBASIC1.67□□□□□ -2.14
IRX4P78413 MTCYBP6-201ENST00000441810 138 ntBASIC1.67□□□□□ -2.14
IRX4P78413 RPL26P26-201ENST00000480251 434 ntBASIC1.67□□□□□ -2.14
IRX4P78413 SNORA31.17-201ENST00000516953 127 ntBASIC1.67□□□□□ -2.14
IRX4P78413 AC040926.1-201ENST00000530195 238 ntBASIC1.67□□□□□ -2.14
IRX4P78413 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.67□□□□□ -2.14
IRX4P78413 AP002001.1-203ENST00000534002 267 ntBASIC1.67□□□□□ -2.14
IRX4P78413 MIR4659A-201ENST00000580269 81 ntBASIC1.67□□□□□ -2.14
IRX4P78413 SNORA4-201ENST00000584302 138 ntBASIC1.67□□□□□ -2.14
IRX4P78413 RPS29P30-201ENST00000600975 111 ntBASIC1.67□□□□□ -2.14
IRX4P78413 AL645939.4-201ENST00000604495 135 ntBASIC1.67□□□□□ -2.14
IRX4P78413 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.67□□□□□ -2.14
IRX4P78413 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
IRX4P78413 RNU6-1266P-201ENST00000362794 105 ntBASIC1.66□□□□□ -2.14
IRX4P78413 RNU1-42P-201ENST00000364033 160 ntBASIC1.66□□□□□ -2.14
IRX4P78413 RNU6-450P-201ENST00000364654 107 ntBASIC1.66□□□□□ -2.14
IRX4P78413 RNU6-1227P-201ENST00000383981 107 ntBASIC1.66□□□□□ -2.14
IRX4P78413 AC008134.1-201ENST00000420943 193 ntBASIC1.66□□□□□ -2.14
IRX4P78413 AC099677.2-201ENST00000436385 175 ntBASIC1.66□□□□□ -2.14
IRX4P78413 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.66□□□□□ -2.14
IRX4P78413 AC009474.2-201ENST00000451383 136 ntBASIC1.66□□□□□ -2.14
IRX4P78413 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.66□□□□□ -2.14
IRX4P78413 AC011406.1-201ENST00000512440 370 ntBASIC1.66□□□□□ -2.14
IRX4P78413 AC025647.1-201ENST00000517879 253 ntBASIC1.66□□□□□ -2.14
IRX4P78413 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.66□□□□□ -2.14
IRX4P78413 AL390123.1-201ENST00000603216 237 ntBASIC1.66□□□□□ -2.14
IRX4P78413 AC016925.2-201ENST00000605108 242 ntBASIC1.66□□□□□ -2.14
IRX4P78413 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.66□□□□□ -2.14
IRX4P78413 AC240442.1-201ENST00000616055 283 ntBASIC1.66□□□□□ -2.14
IRX4P78413 MIR3674-201ENST00000636576 68 ntBASIC1.66□□□□□ -2.14
IRX4P78413 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
IRX4P78413 AP000648.3-201ENST00000623539 4507 ntBASIC1.66□□□□□ -2.14
IRX4P78413 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.65□□□□□ -2.14
IRX4P78413 RNU6-862P-201ENST00000362804 105 ntBASIC1.65□□□□□ -2.15
IRX4P78413 RNU6-112P-201ENST00000363599 104 ntBASIC1.65□□□□□ -2.15
IRX4P78413 RNU6-392P-201ENST00000364926 101 ntBASIC1.65□□□□□ -2.15
IRX4P78413 SNORD14.1-201ENST00000365609 90 ntBASIC1.65□□□□□ -2.15
IRX4P78413 Y_RNA.424-201ENST00000384063 103 ntBASIC1.65□□□□□ -2.15
IRX4P78413 Y_RNA.526-201ENST00000384572 110 ntBASIC1.65□□□□□ -2.15
IRX4P78413 MRPL42P3-201ENST00000401492 326 ntBASIC1.65□□□□□ -2.15
IRX4P78413 MRPL35P1-201ENST00000404272 572 ntBASIC1.65□□□□□ -2.15
IRX4P78413 AC005534.2-201ENST00000431047 433 ntBASIC1.65□□□□□ -2.15
IRX4P78413 HMGN2P34-201ENST00000437647 269 ntBASIC1.65□□□□□ -2.15
IRX4P78413 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.65□□□□□ -2.15
IRX4P78413 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.65□□□□□ -2.15
IRX4P78413 SNORD53B-201ENST00000577887 78 ntBASIC1.65□□□□□ -2.15
IRX4P78413 MIR6504-201ENST00000613520 61 ntBASIC1.65□□□□□ -2.15
IRX4P78413 snoU2-30.2-201ENST00000362805 70 ntBASIC1.64□□□□□ -2.15
IRX4P78413 Y_RNA.645-201ENST00000391229 102 ntBASIC1.64□□□□□ -2.15
IRX4P78413 MIR1253-201ENST00000408273 105 ntBASIC1.64□□□□□ -2.15
IRX4P78413 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.64□□□□□ -2.15
IRX4P78413 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.64□□□□□ -2.15
IRX4P78413 AC124312.5-201ENST00000604451 268 ntBASIC1.64□□□□□ -2.15
IRX4P78413 AC040896.1-201ENST00000613819 479 ntBASIC1.64□□□□□ -2.15
IRX4P78413 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.64□□□□□ -2.15
IRX4P78413 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
IRX4P78413 Y_RNA.202-201ENST00000364083 110 ntBASIC1.63□□□□□ -2.15
IRX4P78413 RNU4-50P-201ENST00000364361 141 ntBASIC1.63□□□□□ -2.15
IRX4P78413 RNU6-60P-201ENST00000364792 103 ntBASIC1.63□□□□□ -2.15
IRX4P78413 SNORA72.2-201ENST00000365028 127 ntBASIC1.63□□□□□ -2.15
IRX4P78413 RNU6-1240P-201ENST00000365155 104 ntBASIC1.63□□□□□ -2.15
IRX4P78413 Y_RNA.471-201ENST00000384312 102 ntBASIC1.63□□□□□ -2.15
IRX4P78413 RNU6-296P-201ENST00000384608 107 ntBASIC1.63□□□□□ -2.15
IRX4P78413 RNU6-417P-201ENST00000384712 107 ntBASIC1.63□□□□□ -2.15
IRX4P78413 RNA5SP475-201ENST00000410568 110 ntBASIC1.63□□□□□ -2.15
IRX4P78413 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.63□□□□□ -2.15
IRX4P78413 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
IRX4P78413 RPEP5-201ENST00000441137 268 ntBASIC1.63□□□□□ -2.15
IRX4P78413 AC093852.1-201ENST00000503587 266 ntBASIC1.63□□□□□ -2.15
IRX4P78413 AC027419.1-201ENST00000522976 328 ntBASIC1.63□□□□□ -2.15
IRX4P78413 AP003072.1-201ENST00000531740 145 ntBASIC1.63□□□□□ -2.15
IRX4P78413 CBX3P4-201ENST00000538909 354 ntBASIC1.63□□□□□ -2.15
IRX4P78413 AC055872.1-201ENST00000570978 278 ntBASIC1.63□□□□□ -2.15
IRX4P78413 AC005176.2-201ENST00000596933 147 ntBASIC1.63□□□□□ -2.15
IRX4P78413 AL121655.1-201ENST00000605811 308 ntBASIC1.63□□□□□ -2.15
IRX4P78413 AL353149.1-201ENST00000610667 244 ntBASIC1.63□□□□□ -2.15
IRX4P78413 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.63□□□□□ -2.15
IRX4P78413 MIR338-201ENST00000636369 67 ntBASIC1.63□□□□□ -2.15
IRX4P78413 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
IRX4P78413 MIR410-201ENST00000362222 80 ntBASIC1.62□□□□□ -2.15
IRX4P78413 SNORA33-201ENST00000363664 130 ntBASIC1.62□□□□□ -2.15
IRX4P78413 RNU1-96P-201ENST00000364163 162 ntBASIC1.62□□□□□ -2.15
IRX4P78413 RNU6-454P-201ENST00000364292 107 ntBASIC1.62□□□□□ -2.15
IRX4P78413 SNORA33.2-201ENST00000365413 134 ntBASIC1.62□□□□□ -2.15
IRX4P78413 AC117470.1-201ENST00000381974 330 ntBASIC1.62□□□□□ -2.15
IRX4P78413 Y_RNA.389-201ENST00000383924 113 ntBASIC1.62□□□□□ -2.15
IRX4P78413 RNU6-20P-201ENST00000384106 107 ntBASIC1.62□□□□□ -2.15
IRX4P78413 Y_RNA.458-201ENST00000384240 102 ntBASIC1.62□□□□□ -2.15
IRX4P78413 RNU6-1011P-201ENST00000384668 107 ntBASIC1.62□□□□□ -2.15
IRX4P78413 AL117342.1-201ENST00000404861 406 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms