Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 Y_RNA.120-201ENST00000363304 110 ntBASIC2.96□□□□□ -1.94
YBX1P67809 RNU6-234P-201ENST00000365229 104 ntBASIC2.96□□□□□ -1.94
YBX1P67809 DYNLT3P1-201ENST00000378574 347 ntBASIC2.96□□□□□ -1.94
YBX1P67809 RNU6-484P-201ENST00000384016 107 ntBASIC2.96□□□□□ -1.94
YBX1P67809 SNORD15B-201ENST00000384714 146 ntBASIC2.96□□□□□ -1.94
YBX1P67809 SNORA40.5-201ENST00000391061 128 ntBASIC2.96□□□□□ -1.94
YBX1P67809 RNU2-70P-201ENST00000410718 179 ntBASIC2.96□□□□□ -1.94
YBX1P67809 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.96□□□□□ -1.94
YBX1P67809 MLLT10P1-201ENST00000418346 262 ntBASIC2.96□□□□□ -1.94
YBX1P67809 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.96□□□□□ -1.94
YBX1P67809 AC083906.5-201ENST00000503722 328 ntBASIC2.96□□□□□ -1.94
YBX1P67809 ATP5EP1-201ENST00000510257 156 ntBASIC2.96□□□□□ -1.94
YBX1P67809 RNA5SP112-201ENST00000515937 99 ntBASIC2.96□□□□□ -1.94
YBX1P67809 RNU6-948P-201ENST00000516374 107 ntBASIC2.96□□□□□ -1.94
YBX1P67809 RNU6-589P-201ENST00000516485 107 ntBASIC2.96□□□□□ -1.94
YBX1P67809 RNA5SP170-201ENST00000517150 101 ntBASIC2.96□□□□□ -1.94
YBX1P67809 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.96□□□□□ -1.94
YBX1P67809 AC015720.1-201ENST00000565251 277 ntBASIC2.96□□□□□ -1.94
YBX1P67809 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.96□□□□□ -1.94
YBX1P67809 AC093732.2-201ENST00000607950 274 ntBASIC2.96□□□□□ -1.94
YBX1P67809 AL021707.8-201ENST00000609428 183 ntBASIC2.96□□□□□ -1.94
YBX1P67809 AC013412.1-201ENST00000610687 192 ntBASIC2.96□□□□□ -1.94
YBX1P67809 MIR7106-201ENST00000612419 65 ntBASIC2.96□□□□□ -1.94
YBX1P67809 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
YBX1P67809 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
YBX1P67809 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
YBX1P67809 Y_RNA.43-201ENST00000362670 111 ntBASIC2.95□□□□□ -1.94
YBX1P67809 Y_RNA.114-201ENST00000363265 113 ntBASIC2.95□□□□□ -1.94
YBX1P67809 RNU6-944P-201ENST00000364023 107 ntBASIC2.95□□□□□ -1.94
YBX1P67809 SNORD18B-201ENST00000365659 72 ntBASIC2.95□□□□□ -1.94
YBX1P67809 RNU6-418P-201ENST00000384035 107 ntBASIC2.95□□□□□ -1.94
YBX1P67809 SNORA72-201ENST00000384339 132 ntBASIC2.95□□□□□ -1.94
YBX1P67809 RNU6-1274P-201ENST00000384557 107 ntBASIC2.95□□□□□ -1.94
YBX1P67809 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.95□□□□□ -1.94
YBX1P67809 RPS29P6-201ENST00000438196 145 ntBASIC2.95□□□□□ -1.94
YBX1P67809 AC023449.1-201ENST00000454464 154 ntBASIC2.95□□□□□ -1.94
YBX1P67809 AC010531.2-201ENST00000465012 153 ntBASIC2.95□□□□□ -1.94
YBX1P67809 RPS27P22-201ENST00000478056 241 ntBASIC2.95□□□□□ -1.94
YBX1P67809 AC025647.1-201ENST00000517879 253 ntBASIC2.95□□□□□ -1.94
YBX1P67809 MIR3613-201ENST00000579844 87 ntBASIC2.95□□□□□ -1.94
YBX1P67809 MIR4672-201ENST00000583126 81 ntBASIC2.95□□□□□ -1.94
YBX1P67809 AL929325.1-201ENST00000603096 117 ntBASIC2.95□□□□□ -1.94
YBX1P67809 UCA1.1-201ENST00000620952 75 ntBASIC2.95□□□□□ -1.94
YBX1P67809 AC007318.2-201ENST00000620999 243 ntBASIC2.95□□□□□ -1.94
YBX1P67809 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
YBX1P67809 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
YBX1P67809 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.95□□□□□ -1.94
YBX1P67809 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
YBX1P67809 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
YBX1P67809 RNU6-755P-201ENST00000364400 103 ntBASIC2.94□□□□□ -1.94
YBX1P67809 SNORD31B-201ENST00000364977 69 ntBASIC2.94□□□□□ -1.94
YBX1P67809 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.94□□□□□ -1.94
YBX1P67809 AC016925.1-201ENST00000458303 298 ntBASIC2.94□□□□□ -1.94
YBX1P67809 SNORD33.1-201ENST00000516213 88 ntBASIC2.94□□□□□ -1.94
YBX1P67809 AL160236.1-201ENST00000556317 195 ntBASIC2.94□□□□□ -1.94
YBX1P67809 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.94□□□□□ -1.94
YBX1P67809 RPL23AP91-201ENST00000569211 455 ntBASIC2.94□□□□□ -1.94
YBX1P67809 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.94□□□□□ -1.94
YBX1P67809 AC131055.1-201ENST00000584626 316 ntBASIC2.94□□□□□ -1.94
YBX1P67809 SNORA50A-202ENST00000629536 136 ntBASIC2.94□□□□□ -1.94
YBX1P67809 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.94□□□□□ -1.94
YBX1P67809 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.93□□□□□ -1.94
YBX1P67809 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.93□□□□□ -1.94
YBX1P67809 MIR22-201ENST00000362190 85 ntBASIC2.93□□□□□ -1.94
YBX1P67809 SNORA5B-201ENST00000363786 132 ntBASIC2.93□□□□□ -1.94
YBX1P67809 RNU6-438P-201ENST00000365561 103 ntBASIC2.93□□□□□ -1.94
YBX1P67809 RNU6-1083P-201ENST00000384022 107 ntBASIC2.93□□□□□ -1.94
YBX1P67809 RN7SKP220-201ENST00000410611 288 ntBASIC2.93□□□□□ -1.94
YBX1P67809 Y_RNA.630-201ENST00000411370 108 ntBASIC2.93□□□□□ -1.94
YBX1P67809 AC008134.1-201ENST00000420943 193 ntBASIC2.93□□□□□ -1.94
YBX1P67809 AP004217.1-201ENST00000480579 346 ntBASIC2.93□□□□□ -1.94
YBX1P67809 MRPS36P2-201ENST00000512569 299 ntBASIC2.93□□□□□ -1.94
YBX1P67809 RNA5SP341-201ENST00000516261 117 ntBASIC2.93□□□□□ -1.94
YBX1P67809 MIR2681-201ENST00000581814 105 ntBASIC2.93□□□□□ -1.94
YBX1P67809 AL670379.3-201ENST00000605040 251 ntBASIC2.93□□□□□ -1.94
YBX1P67809 uc_338.4-201ENST00000616635 176 ntBASIC2.93□□□□□ -1.94
YBX1P67809 AC006435.5-201ENST00000624486 112 ntBASIC2.93□□□□□ -1.94
YBX1P67809 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.93□□□□□ -1.94
YBX1P67809 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
YBX1P67809 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.93□□□□□ -1.94
YBX1P67809 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
YBX1P67809 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
YBX1P67809 RNU6-486P-201ENST00000363116 107 ntBASIC2.92□□□□□ -1.94
YBX1P67809 RNU6-1255P-201ENST00000363434 112 ntBASIC2.92□□□□□ -1.94
YBX1P67809 Y_RNA.203-201ENST00000364106 102 ntBASIC2.92□□□□□ -1.94
YBX1P67809 RNU6-1240P-201ENST00000365155 104 ntBASIC2.92□□□□□ -1.94
YBX1P67809 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.92□□□□□ -1.94
YBX1P67809 AC009414.1-201ENST00000427200 443 ntBASIC2.92□□□□□ -1.94
YBX1P67809 RN7SKP43-201ENST00000516173 320 ntBASIC2.92□□□□□ -1.94
YBX1P67809 RNA5SP153-201ENST00000516498 76 ntBASIC2.92□□□□□ -1.94
YBX1P67809 Y_RNA.690-201ENST00000516603 95 ntBASIC2.92□□□□□ -1.94
YBX1P67809 SCARNA11.3-201ENST00000517276 130 ntBASIC2.92□□□□□ -1.94
YBX1P67809 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.92□□□□□ -1.94
YBX1P67809 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.92□□□□□ -1.94
YBX1P67809 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.92□□□□□ -1.94
YBX1P67809 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.92□□□□□ -1.94
YBX1P67809 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.92□□□□□ -1.94
YBX1P67809 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.92□□□□□ -1.94
YBX1P67809 MIR622-201ENST00000638396 96 ntBASIC2.92□□□□□ -1.94
YBX1P67809 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms