Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.86□□□□□ -1.95
HERVK_113P62684 IGKV3-31-201ENST00000523109 329 ntBASIC2.86□□□□□ -1.95
HERVK_113P62684 MIR4648-201ENST00000580107 72 ntBASIC2.86□□□□□ -1.95
HERVK_113P62684 AC090616.3-201ENST00000582184 217 ntBASIC2.86□□□□□ -1.95
HERVK_113P62684 AL355297.2-201ENST00000604792 129 ntBASIC2.86□□□□□ -1.95
HERVK_113P62684 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.86□□□□□ -1.95
HERVK_113P62684 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HERVK_113P62684 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.85□□□□□ -1.95
HERVK_113P62684 Y_RNA.7-201ENST00000362352 102 ntBASIC2.85□□□□□ -1.95
HERVK_113P62684 Y_RNA.8-201ENST00000362353 102 ntBASIC2.85□□□□□ -1.95
HERVK_113P62684 RNU6-899P-201ENST00000363947 107 ntBASIC2.85□□□□□ -1.95
HERVK_113P62684 Y_RNA.240-201ENST00000364469 95 ntBASIC2.85□□□□□ -1.95
HERVK_113P62684 RNA5SP240-201ENST00000365355 128 ntBASIC2.85□□□□□ -1.95
HERVK_113P62684 Y_RNA.361-201ENST00000365515 120 ntBASIC2.85□□□□□ -1.95
HERVK_113P62684 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
HERVK_113P62684 MIR873-201ENST00000401120 77 ntBASIC2.85□□□□□ -1.95
HERVK_113P62684 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.85□□□□□ -1.95
HERVK_113P62684 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.85□□□□□ -1.95
HERVK_113P62684 AC092427.1-202ENST00000430569 476 ntBASIC2.85□□□□□ -1.95
HERVK_113P62684 SNORD65B-201ENST00000459126 73 ntBASIC2.85□□□□□ -1.95
HERVK_113P62684 AC091021.1-201ENST00000468051 388 ntBASIC2.85□□□□□ -1.95
HERVK_113P62684 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.85□□□□□ -1.95
HERVK_113P62684 RNU6-991P-201ENST00000516168 107 ntBASIC2.85□□□□□ -1.95
HERVK_113P62684 MRPS18CP4-201ENST00000535821 231 ntBASIC2.85□□□□□ -1.95
HERVK_113P62684 MIR4524B-201ENST00000581569 115 ntBASIC2.85□□□□□ -1.95
HERVK_113P62684 MIR3133-201ENST00000583157 78 ntBASIC2.85□□□□□ -1.95
HERVK_113P62684 AC021753.1-201ENST00000635724 168 ntBASIC2.85□□□□□ -1.95
HERVK_113P62684 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HERVK_113P62684 Y_RNA.172-201ENST00000363765 102 ntBASIC2.84□□□□□ -1.95
HERVK_113P62684 Y_RNA.238-201ENST00000364441 102 ntBASIC2.84□□□□□ -1.95
HERVK_113P62684 Y_RNA.435-201ENST00000384095 112 ntBASIC2.84□□□□□ -1.95
HERVK_113P62684 RNU6-746P-201ENST00000384112 109 ntBASIC2.84□□□□□ -1.95
HERVK_113P62684 AL356320.1-201ENST00000429616 163 ntBASIC2.84□□□□□ -1.95
HERVK_113P62684 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.84□□□□□ -1.95
HERVK_113P62684 RPL23AP7-203ENST00000449021 469 ntBASIC2.84□□□□□ -1.95
HERVK_113P62684 RNU7-141P-201ENST00000459304 62 ntBASIC2.84□□□□□ -1.95
HERVK_113P62684 AC010409.1-201ENST00000487382 476 ntBASIC2.84□□□□□ -1.95
HERVK_113P62684 AC010598.1-201ENST00000510378 103 ntBASIC2.84□□□□□ -1.95
HERVK_113P62684 SUMO2P18-201ENST00000518873 252 ntBASIC2.84□□□□□ -1.95
HERVK_113P62684 AC100767.1-201ENST00000528178 123 ntBASIC2.84□□□□□ -1.95
HERVK_113P62684 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
HERVK_113P62684 PRELID2P1-201ENST00000552837 301 ntBASIC2.84□□□□□ -1.95
HERVK_113P62684 MIR3117-201ENST00000584034 78 ntBASIC2.84□□□□□ -1.95
HERVK_113P62684 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.84□□□□□ -1.95
HERVK_113P62684 AC068647.2-201ENST00000637380 353 ntBASIC2.84□□□□□ -1.95
HERVK_113P62684 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.84□□□□□ -1.96
HERVK_113P62684 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.96
HERVK_113P62684 AC007336.1-201ENST00000576365 3828 ntBASIC2.84□□□□□ -1.96
HERVK_113P62684 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HERVK_113P62684 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.83□□□□□ -1.96
HERVK_113P62684 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
HERVK_113P62684 RNU6-1205P-201ENST00000363625 106 ntBASIC2.83□□□□□ -1.96
HERVK_113P62684 Y_RNA.182-201ENST00000363880 111 ntBASIC2.83□□□□□ -1.96
HERVK_113P62684 DEFA7P-201ENST00000382676 285 ntBASIC2.83□□□□□ -1.96
HERVK_113P62684 RNU6-220P-201ENST00000390919 107 ntBASIC2.83□□□□□ -1.96
HERVK_113P62684 AC104389.3-201ENST00000445629 235 ntBASIC2.83□□□□□ -1.96
HERVK_113P62684 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.83□□□□□ -1.96
HERVK_113P62684 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.83□□□□□ -1.96
HERVK_113P62684 RNU6-1337P-201ENST00000516525 95 ntBASIC2.83□□□□□ -1.96
HERVK_113P62684 RNU6-1212P-201ENST00000517023 104 ntBASIC2.83□□□□□ -1.96
HERVK_113P62684 AC021269.2-201ENST00000532318 330 ntBASIC2.83□□□□□ -1.96
HERVK_113P62684 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.83□□□□□ -1.96
HERVK_113P62684 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.83□□□□□ -1.96
HERVK_113P62684 MIR4769-201ENST00000584126 77 ntBASIC2.83□□□□□ -1.96
HERVK_113P62684 AC046143.2-201ENST00000609789 160 ntBASIC2.83□□□□□ -1.96
HERVK_113P62684 AC010297.1-201ENST00000623948 149 ntBASIC2.83□□□□□ -1.96
HERVK_113P62684 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HERVK_113P62684 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HERVK_113P62684 AC068700.1-201ENST00000565862 3754 ntBASIC2.82□□□□□ -1.96
HERVK_113P62684 Y_RNA.24-201ENST00000362508 103 ntBASIC2.82□□□□□ -1.96
HERVK_113P62684 SNORA27.1-201ENST00000362604 124 ntBASIC2.82□□□□□ -1.96
HERVK_113P62684 RNU6-271P-201ENST00000363858 105 ntBASIC2.82□□□□□ -1.96
HERVK_113P62684 RNA5SP456-201ENST00000364002 114 ntBASIC2.82□□□□□ -1.96
HERVK_113P62684 RNU6-804P-201ENST00000384286 107 ntBASIC2.82□□□□□ -1.96
HERVK_113P62684 RNU6-1235P-201ENST00000384559 107 ntBASIC2.82□□□□□ -1.96
HERVK_113P62684 SNORA8.3-201ENST00000384679 139 ntBASIC2.82□□□□□ -1.96
HERVK_113P62684 MIR95-201ENST00000385072 81 ntBASIC2.82□□□□□ -1.96
HERVK_113P62684 AC007064.1-201ENST00000412238 351 ntBASIC2.82□□□□□ -1.96
HERVK_113P62684 AL445687.1-201ENST00000439946 251 ntBASIC2.82□□□□□ -1.96
HERVK_113P62684 RNU6-498P-201ENST00000459468 107 ntBASIC2.82□□□□□ -1.96
HERVK_113P62684 SNORA48.11-201ENST00000517015 89 ntBASIC2.82□□□□□ -1.96
HERVK_113P62684 AC025647.1-201ENST00000517879 253 ntBASIC2.82□□□□□ -1.96
HERVK_113P62684 AC103810.6-201ENST00000606708 136 ntBASIC2.82□□□□□ -1.96
HERVK_113P62684 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.82□□□□□ -1.96
HERVK_113P62684 Y_RNA.802-201ENST00000614892 130 ntBASIC2.82□□□□□ -1.96
HERVK_113P62684 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HERVK_113P62684 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HERVK_113P62684 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.82□□□□□ -1.96
HERVK_113P62684 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.82□□□□□ -1.96
HERVK_113P62684 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
HERVK_113P62684 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HERVK_113P62684 AL356292.1-201ENST00000283110 373 ntBASIC2.81□□□□□ -1.96
HERVK_113P62684 RNU6-187P-201ENST00000384139 106 ntBASIC2.81□□□□□ -1.96
HERVK_113P62684 SNORD116-13-201ENST00000384408 92 ntBASIC2.81□□□□□ -1.96
HERVK_113P62684 AL355497.1-201ENST00000406262 551 ntBASIC2.81□□□□□ -1.96
HERVK_113P62684 AC008134.1-201ENST00000420943 193 ntBASIC2.81□□□□□ -1.96
HERVK_113P62684 AC003685.2-201ENST00000422795 395 ntBASIC2.81□□□□□ -1.96
HERVK_113P62684 AL137159.1-201ENST00000452808 512 ntBASIC2.81□□□□□ -1.96
HERVK_113P62684 AC117454.1-201ENST00000491120 168 ntBASIC2.81□□□□□ -1.96
HERVK_113P62684 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms